Lytechinus variegatus (green sea urchin): 121423859
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Entry
121423859 CDS
T11173
Name
(RefSeq) pumilio homolog 3-like
KO
K14844
pumilio homology domain family member 6
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121423859
03009 Ribosome biogenesis [BR:
lvg03009
]
121423859
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121423859
Ribosome biogenesis [BR:
lvg03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121423859
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
PUF_NOP9
Bmt2
GINT1_N
Motif
Other DBs
NCBI-GeneID:
121423859
NCBI-ProteinID:
XP_041475303
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All DBs
Position
11:17123964..17148217
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AA seq
673 aa
AA seq
DB search
MTFKDLTKDGKGSPKRKHLDMDSSTDSAKKDRKIKKIKRETESPAQRTAETKKATKTPDG
KDKLSKFSDKRRPSAKKPVPKSKENSAGKPGQKGGKSFPKKGNFKKDKDKPWKGGQKRKG
GKDDIEKSKRLKLEELKKKERKQVRKQVKSNFELAQKAKNAWEVVRKHNCKPETRTKHIT
ELCELLDGRVLDLVKAHDTVRVIQCCVQFGTPEQRTKIFEEIKDHVVELAKCKYAKFYVL
KMFRYGSKEQRQAIMQSFHGKVCQLVRHKEAAEVLEEAYNNHANAKDRSALLEEFYGARF
AVFKSSDVHNLEEILEKDPTLRQGIMDHMLKTLTPLLDKTVIKHTIVHKAIYDFLLHAPD
KMRAELIEAMRDVVVQILHTQDGARAAMHCLWFGSAKDRKVMIKSFKTFVLKICKEEFGH
KVLFALFDCVDDTKIVSKVIIEEMMKNAYEVATDQYGRKVLLYLLAPRDASHFHPDLVKQ
LQKGDGNQISKKDSVVRRKELLEAVSPALLKLLITHTKEMAYSKSNSQLALAMLQHIHGD
KNAVYSMLATLAAEELIPILVNDPSKMDDMHIVEHPSGHLLFKRLLAHEKTEREKGDVQS
SLSSCLLEELSDENIKSWLRINRGALVLVSLADCGNADATERIRTVLQESHKSVAKLTSN
AVQILKEKLDLKT
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgacattcaaagatcttaccaaggatggaaagggatccccaaagagaaagcatttggac
atggacagctccactgatagtgctaagaaggataggaaaataaaaaagatcaagcgagag
acagaatcgccagctcaaaggacagcagagactaaaaaagcaaccaagacgccagatgga
aaggataagctctccaagttttcggacaagaggaggccaagtgccaagaaaccagttcct
aagtcaaaggagaattctgctggtaagccaggtcagaagggaggcaagtcattcccaaag
aaggggaacttcaagaaagataaggataaaccttggaaaggaggacagaagcgcaaagga
ggcaaggatgacatagaaaagagtaaacggctcaaattggaggagttgaagaagaaggag
agaaagcaagtcaggaagcaagtgaagagcaactttgaactagcacagaaagccaaaaat
gcttgggaggttgtgagaaaacataactgcaaaccggaaactagaaccaagcacataaca
gagttatgtgaacttcttgatgggcgagtattagatttagtgaaggcacatgacacagtt
cgagtgattcaatgttgtgttcagtttgggacacctgagcagaggacaaagatctttgag
gaaataaaagatcacgttgtggagctcgccaaatgcaagtacgccaagttctacgtgctg
aagatgttccgctacgggtcgaaggagcagcgacaggccataatgcagtcgttccatggc
aaggtctgtcaactggtgaggcacaaggaggctgcagaagtgctggaggaagcctacaac
aaccacgccaatgccaaggataggtcggctctcttggaggagttctatggagcaaggttt
gctgtcttcaagtcctcagatgtacacaaccttgaggaaatccttgagaaagacccaacc
ctcagacaaggcatcatggatcatatgcttaaaacactcactcctcttcttgataagact
gtaatcaagcacacaatcgtacacaaagccatatatgatttcttacttcatgcccctgat
aaaatgagagcagagctaattgaagctatgagggatgttgtagtccagattcttcacaca
caggatggggcacgggcagctatgcattgtctctggtttggctcagcaaaggatcggaaa
gtgatgatcaagtctttcaaaacctttgttctgaagatctgcaaggaagagtttggacac
aaagtactttttgcactctttgattgtgtagatgatactaagattgttagcaaagtcatc
attgaggaaatgatgaagaatgcatatgaagtagcgacagatcagtacggacggaaagtc
ttgctataccttttagctccaagagatgcttctcacttccatccagatcttgtaaagcaa
ctacagaaaggggatggtaaccaaatcagtaaaaaggacagtgtcgtgagaagaaaggag
ctgttggaagctgtatctcctgctctactgaagcttctcatcacacacaccaaggaaatg
gcttatagtaaatcaaatagtcaactagcactggctatgcttcaacatatacatggtgat
aagaatgcagtatacagtatgttggccacactggcagctgaggaactcattccaattctg
gtcaatgatcctagtaagatggatgatatgcacattgttgagcatccgtctggacatctt
ctcttcaaaaggctgttggctcatgagaaaacagagagagaaaaaggagatgtgcaaagc
tcattatcgagttgtctgctagaggagttatcagatgaaaacatcaaatcttggctcagg
ataaatagaggggccttagtcttggtcagccttgcggattgtggaaatgcagatgccaca
gagaggatacgcacggtgttacaggaatctcataagagcgttgccaagcttacatcaaat
gcagtccaaattctaaaagagaagttggacctcaaaacttga
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