Lytechinus variegatus (green sea urchin): 121423998
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Entry
121423998 CDS
T11173
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1-like
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lvg03041
]
121423998
03110 Chaperones and folding catalysts [BR:
lvg03110
]
121423998
Enzymes [BR:
lvg01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
121423998
Spliceosome [BR:
lvg03041
]
Complex C
Other components
PPlases
121423998
Chaperones and folding catalysts [BR:
lvg03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
121423998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
WD40_Prp19
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_Vps41
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
121423998
NCBI-ProteinID:
XP_041475493
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All DBs
Position
11:19394870..19410843
Genome browser
AA seq
621 aa
AA seq
DB search
MASSGDLVEKGTKRSMEEEDEDDEWIGPMPAEAIKPKKKKVLEFENVYLDNMPSAELYEK
SLMHRDTITHVAATKTEFIITASCDGHVKFWKKQEGDIEFVKHFRAHLGKIQDISVSSDG
AYLSTISDDKSAKIFDVTNFDMINMMKLTFVPGRCQWIYRAGDAIPALAISDSESGKIYV
YDGKGTSEPLHTLDNKHSAPVILIKYNPVFEVALSVDKQGILEYWMGPKKDYCFPSCVSF
EYKTDTDLYEFVKCKTVPTSLNFSPDGKLVATIAKDRKIRIFRFLTGKLTKVLDESLKTF
TELQQMRQQLPDMEFGRRMAVERDLQKSDAFSLANIIFDESGYFVLYATMLGIKILNLHT
NRISRIIGKQENVRFLHLSMYQGKPKQTKGALTLEMTASDNPALQGSEADPTLVCSAFKK
NRFYLFTRREPDDAKSNEAERDVFNEKPSKEEQMAATQGGSAQRLSSTAILHTTMGDVHV
KLFTEECPKTIENFCVHSRNGYYNGHIFHRVIKQFMIQTGDPQGNGTGGESIWGGEFEDE
FHPKLRHDRPYTLSMANAGPNTNGSQFFITVVPCPWLDQKHTVFGRVIKGMECVQKISEV
KVHPKTDKPLDDIRIVSISVK
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatcgggtgacttggtggaaaagggaacaaaacgtagcatggaagaggaagat
gaagatgatgaatggattggtccgatgcccgcggaggctatcaagcctaaaaagaaaaag
gtgctcgagtttgaaaatgtgtacttggacaacatgccttctgcagagctttatgaaaag
agtttgatgcatagggacaccatcactcatgttgccgccacaaagaccgagtttatcatc
actgccagctgcgatggccatgtcaagttctggaagaagcaagagggtgacattgaattt
gtcaaacatttcagagcacatctgggtaagatacaagacatatctgtaagcagtgatggt
gcatacttgtcaactatatctgatgataaatctgcaaagatctttgatgttacaaacttt
gatatgatcaacatgatgaagctgacctttgtacctggtcgatgtcagtggatctacaga
gcaggtgatgctatacctgcacttgccatatctgatagtgagagtggtaagatttatgtt
tatgatggaaagggtacaagtgaacccctacacacactggacaataagcattctgccccg
gtcatacttattaagtacaatccagtttttgaggttgctctctccgtcgataaacaaggc
atcttggagtattggatgggaccaaagaaagactactgcttcccatcttgtgttagcttc
gagtacaagacggatacagatctatatgagtttgtcaagtgtaaaacagtgcctaccagt
cttaacttctctcctgatggtaaacttgttgcaacgatagccaaagatagaaagattcgc
atctttcgctttctgacgggtaaactcaccaaggtgttagatgaatctttgaagacattc
acagaacttcaacagatgaggcaacagctacctgatatggagtttggtagacgaatggca
gtagagagagatttgcagaaatcggatgcattctctcttgcaaatatcatctttgatgag
agtggttactttgttttgtatgctaccatgcttggtatcaagatactcaacctacacacc
aacaggatatcaagaattataggaaagcaagagaatgttaggttcttgcatctcagcatg
tatcaagggaaacccaaacaaacaaagggcgccctcacgctagagatgaccgcatccgac
aatcctgccttacagggcagcgaagcagaccctaccctggtatgcagtgccttcaagaaa
aaccgtttctacctcttcacaaggagggagcccgacgatgcaaagagtaatgaagctgaa
agagatgtattcaatgagaaaccaagcaaagaagaacaaatggctgcaacacagggtgga
tcagcccagagactatccagtactgctattcttcatacaactatgggtgatgtccatgta
aaactctttacagaagaatgcccaaagaccatagagaatttctgtgtacacagtcggaat
ggatactataacggacatatcttccatcgagtcatcaagcagtttatgattcagacgggg
gatccacaaggtaatggaaccggaggagaatcaatatggggaggagagtttgaggatgag
tttcatcctaaactaagacacgatcgtccctacacactcagcatggccaatgcaggacca
aataccaatggctctcaattcttcatcactgtagtcccatgtccttggttggatcagaag
cacaccgtgttcggacgggtaatcaagggcatggaatgcgtccagaagatcagtgaggtc
aaagttcaccccaagaccgataagcccctggatgacatacgcatcgtcagcatatccgtc
aaatga
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