Lytechinus variegatus (green sea urchin): 121424001
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Entry
121424001 CDS
T11173
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121424001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvg03021
]
121424001
03036 Chromosome and associated proteins [BR:
lvg03036
]
121424001
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121424001
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
121424001
Chromatin remodeling factors
BAF complex
121424001
PBAF complex
121424001
GBAF(ncBAF) complex
121424001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
BRK
Bromodomain
HSA
QLQ
ResIII
DEAD
HDA2-3
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
121424001
NCBI-ProteinID:
XP_041475495
LinkDB
All DBs
Position
11:11130542..11175174
Genome browser
AA seq
1968 aa
AA seq
DB search
MADAPMPAPNQIQDNSMSSDMNHPGTGPSGPSGTGPVQGYDQGGTGPGMQSQGGPMPSPM
QGGPSHSPMMTPSPGPGMSGPSPSPMQQGPGPMGDNNMMPPSMSPMQGGQGHMMPPQGPP
SMGGHVPSSGPGPMPPYQSQMMNQGPRPGHNPMPPPNQGYMGGQYGGQHGGQHGGQGMNT
GGSMGGHGMMGPGQQYQGPSHQVPPHQGQMHQGGPHQGPMHQGPPHQGQPHQGPPHQGPP
HQGPPHQGPQHQGPPHQGPPHQGGPHQGPPHQGSSHQGPPPHQGPPHQGAPHQGPSSHQV
PPHQGGSHQGGPPHQGPPMQGQQGQQQHQVPQHPTSGHQGPPHQAPTSHSGPHQGGPSVP
HQGGPPPGPSGPHSGPQHQGSKPITSQGNMPGHGPMQNQLEHGQRGPSPVQNFPMQNSGP
GQGPHGPQSQQMMPNQNFNPNNNYTMLQRALETMQEKGLQNDPRYPQIVAMANKAKQYAH
MQQPNMPPSGNMGGPPGRNGGYMEGSGNMPPSGYQQHGPQRSRPSPFTPVQLQQLKAQIM
GYKLLSRNQPMPDHLRMAIQGRTSNMMPGYQSQMRGQGPMPGPQGQMHMPSHNWGNQQQP
GNQHRKGMSNMSDMLSSPRMPHQMQQQQQQPQQSQQGSFPGAPGSFPGQQSSGSSQTQQP
LPPPNSNITTVGMLLAKQNRQVPVNKPKGLDPVEILQERENRVAARISYRVQELQTLPGN
LPEDLRVKATIELRALRLLNFQKQLRQDVVACMRKDTTLESALNIKAYKRSKKQTLREAR
ITERLERQQKMELERKRRQKHQEYLSSVIQHAKDFREFHRGIQSKISKCNKAVMMYHANT
EREQKKENERIEKERMRRLMAEDEEGYRKLIDEKKDKRLAYLLTQTDQYIESLTQLVRQH
QDTMKKMKKKKKKKEPTTSEALKEGLVDESSQSSDMPVTVMNQETGQVLSGEAAPRASQL
EAWLEMNPGYAVAPRDEGSDEEDSGSEEEEEEGEEEEEKEVPAPIETKQPDLTGKSAKEI
IQESSVNDDEYKSVEQAGGAGYYNMAHSINEIVTSQPDMLVNGTLKEYQVKGLQWLVSLY
NNNLNGILADEMGLGKTIQTIALICHLIERKKVNGPFLIIVPLSTLSNWNIEFEKWGPAV
NKIVYKGSPQVRRSLALTLRSTKFNVLLTTYEYVMKDKGFLSKIRWKHMIVDEGHRMKNH
HCKLTQILNTHYSSHHRLLLTGTPLQNKLPELWALMNFLLPSIFKSCSTFEQWFNAPFAA
TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQRLLYR
HMQTKGIMLTDGSEKDKKGRGGTKALTNTIMQLRKICNHPFMFQHIEESFSEHLGVTGGI
ISGPDLYRVAGKFELLDRILPKLKATGHRILLFCQMTTLMTILEDFFVYRGFKYLRLDGT
TKADDRGTLLQTFNELDCQYFIFMLSTRAGGLGLNLQTADTVILFDSDWNPHQDLQAQDR
AHRIGQQNEVRVLRLMTVQSVEEKILAAAKWKMSMDSKIIQAGMFDQKSTNSERRAYLRA
LLETEADQDEEENEVPDDETVNQMIARSEEEFEIYQRMDIERRRNEARDPNRKPRLMEEN
ELPSWLVKDEKDVERLTFEEEEEKLFGRGSRQRKDVDYSDTLTEKEFLRAIQDGNLDEIE
EIKKEKKRRYKRKRPIEDDDEQEMEVEREPEREHHQEVEKPKKRRGRPPAEKPTPNPPHL
TKLMKKLVEVMSKYKDNTGRPLAHPFMQLPPKRILPDYYELITKPMDLKKVKDRIRLHKY
RCLDDLEKDTVLMFQNAQIYNLEGSQIYDDSIVLHSVFTTARKCLEQTGRLPPQLGGKSE
SESDSDSDDNEEPETKKPRAKGGKGKGEDKGKKPVKRGRPPRKAVVSDDDDDDDDDDDNE
DDDGKSDQDSQQQSDDDDSDTDDNTPDTSRASSRGASPAPGKKRQTSN
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgccccaatgcctgcaccaaaccagatacaagacaacagtatgagttctgac
atgaatcacccaggaacaggacctagtggtccatcaggaacaggaccagtgcagggatat
gatcaaggaggaacaggccctggtatgcagtcacaaggaggacctatgcctagtcccatg
cagggagggccaagccacagccccatgatgacgccaagtccaggcccaggaatgtccgga
ccaagtcccagtcctatgcagcaagggcctggccccatgggagataataatatgatgcca
ccatcgatgagccccatgcaggggggtcaggggcatatgatgcccccacagggaccacca
tccatgggaggtcatgtgccttcctctggtccaggacctatgccaccgtaccagtcgcag
atgatgaatcagggtccccgtcctggtcacaatccaatgccccctcccaatcagggctac
atgggaggtcagtacggaggtcaacatggtggtcagcatggtggacagggaatgaataca
ggtgggtcaatgggtggacatggcatgatggggcccggacagcagtaccaaggtccctca
caccaggtcccacctcaccaaggccaaatgcatcaaggaggaccccaccaaggacctatg
catcaaggcccaccacatcagggacagccacatcaaggtccaccgcatcaaggtcccccg
catcaaggtcccccacaccaaggtccccagcatcaaggccctccacaccaaggcccacca
catcaaggcgggcctcaccagggccctccccatcaaggatcatcccatcagggtcccccg
ccacatcagggccctccacaccaaggtgcacctcaccagggacctagctctcatcaggta
cccccacaccaaggtggctctcaccaaggtgggccaccccatcaaggaccacccatgcag
ggccaacagggccagcaacaacaccaggtacctcaacatccaaccagcggtcatcaaggt
ccacctcatcaggctccgacatcgcattctggtcctcaccaaggaggaccatctgtccct
caccaaggaggaccaccacccggtccttctggtccacactctggaccacaacaccaaggt
tccaagcccatcacaagccaagggaacatgcctggtcatggacctatgcagaaccagcta
gagcatgggcagcgaggtccaagcccagtgcagaacttccctatgcagaactctgggcca
gggcaaggaccacatggaccacagtctcaacagatgatgcctaatcagaacttcaacccg
aacaacaactataccatgctgcaaagagctctggaaacaatgcaagagaaaggactccag
aatgaccctcgctaccctcagattgtagctatggctaacaaagcgaagcagtatgcccat
atgcagcaacccaacatgccaccatctggcaatatgggtggaccaccgggaagaaatgga
ggttatatggagggctctggtaacatgcctccatcaggctaccagcagcatggtccccag
cggtccaggcctagccccttcacaccggtccagctccagcagctgaaggcacagatcatg
ggctacaagcttctctcccgtaaccaacccatgcctgaccatctacgaatggccattcag
ggacgcacgtcaaacatgatgcctggctatcaatcacaaatgagaggtcaaggccctatg
cctggtccgcaaggccagatgcacatgccatctcacaactggggcaatcagcaacaacca
ggtaaccaacatcgcaagggcatgtcaaacatgagtgacatgctatccagtcccaggatg
cctcatcagatgcagcagcagcagcaacaaccgcagcagtcgcagcaaggttccttccct
ggtgctccagggtcattccctggacagcagtccagtgggagctcccaaacacagcagcca
ctccctcctcccaattccaatatcaccaccgtcgggatgctcctggccaagcagaatcgt
caggtgcctgtcaacaaacccaaggggttggatcctgtagagatcctccaggaaagagag
aatcgagttgctgcccgcatttcctaccgtgtccaagagctgcaaacccttcccggcaat
ctgcccgaggatctccgtgtgaaggccaccatcgagctccgagccctccggctcctcaac
ttccagaagcagcttcgccaggacgtggtcgcctgcatgcgcaaggacaccaccctggaa
tctgccctgaatatcaaggcatacaagcgctccaagaaacagaccctgagagaggcccga
atcacagagaggctggagagacaacagaagatggagttggaacgcaagcgcagacagaaa
catcaggaatatttgagcagtgtgatccaacacgccaaggacttccgtgagttccatcgt
ggcatacagtccaagatatctaaatgtaacaaggctgttatgatgtaccatgccaacacg
gagcgagaacagaagaaggagaatgagcggatcgagaaagaacgtatgcgtcgtctcatg
gcggaagatgaagaagggtacaggaagcttatcgatgagaagaaagacaagcgtcttgcc
tacctgctgacccagactgaccagtacatcgagagcttgacccagctggtcagacaacat
caagacaccatgaaaaagatgaagaaaaagaagaagaagaaggaaccaactaccagtgaa
gccctcaaagaagggcttgttgatgagagcagtcagtcaagtgacatgccagtgactgtg
atgaaccaagagacgggtcaagtgctgtcgggtgaggctgcacccagggctagtcagcta
gaggcttggctggagatgaatcctggctatgctgtagctcctagagatgagggatctgat
gaggaggatagcgggtcagaagaggaagaggaagaaggagaagaggaagaggagaaggag
gtaccagctccaattgaaacaaaacaacctgaccttacaggcaaatcagctaaggagatc
atacaggaatcttcagtgaacgatgatgaatacaagtctgtagagcaagctggtggtgca
ggctattacaacatggcccattccatcaatgagattgtcacctcacaacctgatatgctt
gtcaatggaacactcaaagaataccaggtgaagggtcttcagtggctggtgtctctctat
aacaacaatctgaatggaatcttagctgatgagatgggactgggtaaaaccatccagacc
attgctcttatatgccatctgattgagaggaagaaagtcaatggaccattcctcatcata
gtaccactctcgaccctttccaattggaacattgagtttgagaagtggggaccagccgtc
aacaagattgtttacaaaggttctcctcaggtccgccgtagcctagcactcactctgaga
tcaaccaagttcaacgtactactcaccacctatgagtatgtcatgaaggataagggattc
ctttcaaagatccgatggaagcacatgattgttgatgaaggccatcgtatgaagaaccat
cattgtaaactgactcagattcttaacactcactatagctcacatcatagactcttactc
actggtactcctttgcagaacaagctaccagagttatgggccctgatgaacttcttgttg
ccgagtatcttcaaatcctgcagtacctttgagcaatggttcaatgctccctttgcagct
actggagaaaaggttgagctgaatgaggaagagacgatcctgattatccgtcgtcttcac
aaggttctgagaccattccttctccgtcgtctcaagaaggaagtagaatcgcaactccca
gagaaggttgagtatgtgatcaaatgtgacatgtcagctctacagcgactactgtacaga
cacatgcaaaccaagggaatcatgctgactgatggctccgagaaagacaagaagggacgt
ggtggtaccaaggctctaacaaacactatcatgcagctcaggaaaatatgtaatcatccg
tttatgttccaacatatcgaggaatctttctctgagcatcttggggtgaccggtggaatc
atctctggccccgacctgtacagagtggccggaaagtttgaattgcttgaccgtatcttg
cccaagctgaaggctaccggtcatcgtatcttgctcttctgtcagatgaccactctgatg
accatcttggaagacttctttgtctacagagggttcaaatatctgcgattggatggtaca
acgaaggccgatgatcgtggtaccctcttgcaaaccttcaacgaattagactgccagtac
ttcatcttcatgttgagtaccagggctggtggtctaggtcttaatcttcagactgctgat
actgtcatcttgtttgacagtgactggaaccctcatcaggatctgcaagcccaggaccgt
gcccatcgcatcggtcagcagaacgaggtgcgtgtccttcgtctgatgaccgtccagagc
gtagaggagaagatccttgctgcagccaagtggaagatgagcatggacagtaagatcatc
caggctggtatgttcgatcagaagtctacaaactcagagagaagggcttacctacgagct
ctgctggagacagaagctgatcaagacgaggaggagaatgaagttccagatgacgagacc
gtcaaccagatgatcgctcgatccgaagaggagtttgagatctaccagcgcatggacatc
gagcgtcggcgcaacgaggcccgtgaccctaaccgcaagccgcgtctgatggaggagaac
gagctccccagctggttggtcaaggatgagaaggacgttgagagactgaccttcgaggag
gaagaggagaagctgtttggacgtggctctaggcagaggaaagatgtggactacagtgat
acactcacagagaaggaattcctgcgggcaatccaagatggtaacttggacgagatcgaa
gagatcaagaaggagaagaagcgtcgctacaaacgtaagcgtcccattgaggatgacgat
gagcaagagatggaggtagagagagaaccggagagggagcatcatcaggaggttgagaaa
cccaagaaacgtagagggcgccctccagctgaaaagccaactcctaatcctccgcacctc
accaaacttatgaagaaactggtagaggtcatgtccaagtataaagacaatactggccgt
cccctggcccacccgttcatgcagcttcctcccaagcgtatcctccctgattactacgag
ctcatcaccaaacccatggatctaaagaaggtcaaggataggatcaggctgcacaagtat
cgatgtttggatgatcttgagaaggatactgttctcatgttccagaatgctcagatatac
aatctggaaggctctcagatctatgacgattccatagttcttcattcagtcttcacgacg
gctcgtaaatgtttggaacagaccggtagactgcccccacagctaggaggaaagtcagag
agcgagagtgatagcgacagtgatgacaatgaagaacctgagaccaagaaaccccgggcc
aaaggtggaaagggaaaaggagaagacaaggggaagaaacctgtcaagagggggcgccca
ccccgcaaggccgtcgtcagtgatgacgatgacgacgatgatgacgatgacgacaatgag
gacgatgatggcaaatctgatcaggatagtcaacaacaaagtgatgatgatgattcagac
actgatgataacactccagatacgtcccgggcttcgtctagaggtgcgtcccccgctcca
ggcaagaaacgccaaacaagcaattag
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integrated database retrieval system
