KEGG   Lytechinus variegatus (green sea urchin): 121424059
Entry
121424059         CDS       T11173                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg04137  Mitophagy - animal
lvg04144  Endocytosis
lvg04145  Phagosome
lvg04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121424059
   04145 Phagosome
    121424059
   04137 Mitophagy - animal
    121424059
   04148 Efferocytosis
    121424059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lvg04131]
    121424059
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lvg04147]
    121424059
   04031 GTP-binding proteins [BR:lvg04031]
    121424059
Membrane trafficking [BR:lvg04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    121424059
 Endosome - Lysosome transport
    121424059
Exosome [BR:lvg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121424059
  Exosomal proteins of other body fluids (saliva and urine)
   121424059
  Exosomal proteins of colorectal cancer cells
   121424059
  Exosomal proteins of melanoma cells
   121424059
GTP-binding proteins [BR:lvg04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    121424059
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase MCR_beta AAA_16
Other DBs
NCBI-GeneID: 121424059
NCBI-ProteinID: XP_041475580
LinkDB
Position
1:78134503..78167085
AA seq 216 aa
MANRGGAQRPNGTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQT
VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFGRAKTWVKELQRQ
ASPNIVIALAGNKADLANKRMVEFEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKL
PKNDQVGGPSSGQRGTNRGVDLTESNQQSSGGCCKN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggctaataggggaggagcgcaaagacctaacggcacacagggcaagatatgtcagttc
aaactggtgcttttgggagagtctgcagttggaaagtcaagtttagtgttacggtttgtc
aaaggtcaattccatgagttccaagaaagcacaataggagctgcattcctgacacagaca
gtttgtcttgatgacacaacggtaaagtttgaaatttgggacacagctggacaagagcgt
taccacagcttggcacccatgtactacagaggagcacaggcagcaattgtagtttatgat
atcacaaatcaagaaacctttggaagggccaaaacgtgggtaaaagaattgcaaagacaa
gccagtcccaacattgtcatagcactagctggaaacaaggcagatcttgcaaacaagaga
atggttgaatttgaggaggcccaagcatatgcagaagagaacagcttattgtttatggag
acatctgccaagactgccatgaatgtcaatgatatattcctggcaatagccaagaagctt
ccaaagaatgaccaagttggagggcccagtagtggacaaaggggcacaaacaggggtgtg
gacctaacagagagtaaccagcaatcatcaggggggtgttgcaaaaactaa

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