Lytechinus variegatus (green sea urchin): 121424086
Help
Entry
121424086 CDS
T11173
Name
(RefSeq) tetratricopeptide repeat protein 39B-like isoform X1
KO
K24943
tetratricopeptide repeat protein 39
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lvg04990
]
121424086
Domain-containing proteins not elsewhere classified [BR:
lvg04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
121424086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iml2-TPR_39
TPR_16
TPR_12
TPR_2
ARM_TT21_2nd
DUF7247
Motif
Other DBs
NCBI-GeneID:
121424086
NCBI-ProteinID:
XP_041475611
LinkDB
All DBs
Position
11:13348763..13381038
Genome browser
AA seq
703 aa
AA seq
DB search
MSSGKPRKSSSSRSSRGTSSDVNADAGGSSDEEQFQDAMENFQTRKSPKHRVKEMDLATA
IEETTVALNLFLNNKFSEARAIFEPWSHASIYHALGHGTISYLQAVMTFDPTDIQEAIKW
IKNSIEVANRFRKKTSVMTSMSKMMWKTNYNTYTDEEVHAELCYAESLLERAILSFIQDD
NLINFIKGGLKIRNGYHSYKSCVQMFENRTWPSARSKQQFESGVKFGSGTFNLCISMLPK
RILKLLEFVGFSGNRIKGLTDLERASKLPCLRSPMCSMVIISYHSIGTYVFGTADGDIEL
ARQILEPCLKNYPKGVIFLFLAARIEEISGNLDEAIDKFQECIASQQEWRQFHHLCYWEL
MWCHAYKLDWPMAAQYANKLCEESRWSKAIYHHQQASFLAMHLPRTDACIQNINDIYAKV
PELKQRIAGKSIPMEKFAVNKAKKHLIHGTENSLVGLELIYIWNGFSILAKKKELLEPVL
LLTEATLQQLKKTKGSASRSSGCYWDDYSLAMLLKGITLRYLSRPSQAELCFQEVISNER
DLHYDHYLVPYATLELGLLYLQYDRLQEAKTFLTQCRHHNKKYMLENRLHFKMHAALDNL
KTKMTQSSEIPAQDSLNLEGEDEERTGPEEDGLEMSIASEASQDSLDKDGPIDGPGTNLK
NKDQDSLTGDGSVDGPMNKVGPTEDEIARTNDKEDQDLSSGPR
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctggaaaaccaaggaagagtagctcctcacggagcagcagaggtacctcatca
gatgtgaatgcagatgctggaggaagcagtgatgaagaacagtttcaagatgcgatggaa
aacttccaaaccagaaagagcccaaaacacagagtaaaagaaatggatctagctactgcc
attgaagagactacagtagcactcaacctctttctcaacaacaaattcagtgaggctaga
gccatatttgaaccatggtctcatgcaagtatctaccatgccttgggccacggaactatc
agctacctccaggctgtcatgacctttgaccccacagacatccaggaagctatcaaatgg
atcaagaactccattgaggttgccaaccggttccggaagaaaacgagtgtgatgacgtcc
atgtcaaaaatgatgtggaagaccaactataacacatacacagacgaagaggtacatgct
gagttatgctatgctgaatctctcctggagcgtgcaatcctttctttcatccaagatgac
aaccttatcaatttcatcaaaggtggactgaaaataagaaatggttaccattcttacaaa
tcatgtgtccagatgtttgaaaatagaacttggccatcagctagatcaaagcaacagttt
gagagcggagtcaagtttggtagtggtacatttaatctgtgtatatcaatgttgccaaag
aggatactgaaattactagagtttgtaggattctcaggaaacaggataaaagggctgact
gatttagaaagggcttccaaacttccttgtcttaggtctcctatgtgttccatggtcatc
atcagttaccattcaataggaacttatgtattcggtactgctgatggagacattgagctt
gctagacaaatcttagaaccgtgtctgaagaactatcccaagggagtcatcttcttattt
ttggcagcgaggatagaagagatatcaggaaacctggatgaagcaatagataagttccag
gagtgcattgcctcgcagcaggaatggaggcagtttcatcacttgtgttactgggaactt
atgtggtgccacgcctataaacttgattggccaatggctgctcaatatgctaataagctg
tgtgaagaaagcaggtggtctaaggctatttaccatcaccagcaggctagcttcttagcc
atgcatctaccacgtaccgacgcttgtatacagaacatcaatgacatctacgccaaggta
ccagaacttaaacaacgtattgcaggcaagtctatccccatggagaagtttgcggttaac
aaggccaagaaacatctcatccatggcactgaaaattcactcgtagggctggagttgatc
tatatctggaatgggttttccattcttgccaagaagaaagagcttttagaaccagtacta
ctcttaacagaggcaacacttcaacagcttaagaagacgaaaggttctgcgagtagaagt
agtggctgttactgggatgattatagtttagccatgctcctgaaaggaatcaccctcaga
tatctgtcaagaccttctcaagcagaactgtgctttcaagaagtcatttctaatgaaaga
gatcttcattatgatcattacctggtaccgtatgcaacccttgaacttggcttactctat
ctacagtatgatagattgcaggaagcgaagacgttccttacacaatgcaggcatcacaac
aagaaatacatgttagagaacagacttcacttcaagatgcatgctgccctggacaacctc
aagaccaagatgacacagtcatcggagatcccggcccaggactcgctcaaccttgaagga
gaggatgaagagaggactggaccagaagaagatggactagaaatgagcatagcatctgaa
gcatcccaggactcacttgacaaggatgggccgatagatgggccaggaaccaacctcaag
aacaaagaccaggattctcttacaggagatggatcagtagatggaccaatgaacaaagtg
ggaccaacagaagatgagatagcaaggactaatgacaaagaagaccaggacttgtcttct
ggtcctagatag
DBGET
integrated database retrieval system
