Lytechinus variegatus (green sea urchin): 121424649
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Entry
121424649 CDS
T11173
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121424649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121424649
03036 Chromosome and associated proteins [BR:
lvg03036
]
121424649
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121424649
Membrane trafficking [BR:
lvg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121424649
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
121424649
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
121424649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
DUF4200
DUF7455
Motif
Other DBs
NCBI-GeneID:
121424649
NCBI-ProteinID:
XP_041476314
LinkDB
All DBs
Position
12:complement(3500684..3575213)
Genome browser
AA seq
1368 aa
AA seq
DB search
MATQENDQGDVFPDSTLQSTPKVSLRERQSMAEKPVKIGTRVEIIGKGWLGKVAFVGTTT
FAAGKWIGVVLDEPKGKNNGTVQGKKYFSCPDNHGILIRQSQVSILDDGDRTPSPVTTPA
SSSSIPKPSAAKGKVDSALASKQSRAAMYAKKLTERNLEKSANNGGRKSSIPSLMRRSGD
IPTPRRSSSPSGIQAPKSIQRPSTKPGTKIGKPASSSSSSSNAPSPTPASAQAPAPEPLA
SVSSQGDGSSSEEAEILKLEVKDLQEKLDTLKMKRAEDRAKLKEGEKMRIQLQQLQEFKS
KMMEAKVDLERQLQEAKNEAREAVEERERHAEEMAGVAETIEMATLDKEMAEEKADTLQQ
EVDSLKERVEELTLDLELLRSEIEEGGTEGASASYQLKQLEQQNNRLKEALVKLRDLSNT
EKQEHQRAQKDKEKLSQELKDIKAQKDSTNKALKDAENTIIELKEQVDAALGAEEMVESL
TEKNLEMEEKFQELEATMADLEAMNDMNEELQENARETEMELREELDMSKSQISQYQLKI
NQFQENIQDHQETIAKFRQLTASLQEKNRDLLNQTQSSEADSSPSEAPAYDFTTKFTEAK
VQSKTIEVELRKLEVNQANEHIRLLTSFMPDSFLRRGGDHDCVHVLMLVSRMLAKSKLLI
SHIKDKADIPETMNREQVLRHNHGEQLSFFNSLTFMMHKLRTILNKYHTALSTCSVELFC
KIGTLFPEIAPHERCVDHMLDLLKKDQLDENVSMESLERAIEYLEHLYSVHLLQEEIDTT
NLMANHISFMSSGSDCVALEVKKLRVLMQANQETADFSILMRDMESTNTDLKQFARMIRR
RLPSQALESTMDGPSPGPTSISYGVDVQNSLYESADLMMKVVTALKDCGHHAMKHASSLA
DEAVKNKNKSDEEEAKDTDGIPVKKLEQLADRSSELAFGKADKGPYQSFRECLVKAMVIL
NKISTAMQEGEYDANIPQDKIQPPVERRAVKVKSEICDAEGLGHKLESKESEMKEMKRQL
KQKQDEVSTSQVRLGLVEKKLENASRDAEDKVRKVEQKLSSAQEQAKKKEKEFEATLDHM
QVDIDSLEQEKSELKQRLTQLSKRTLLDSITRTTPQSGVAVAMSGGAGQGSGSPAGPAVG
SGGGGQVMVKDSPMLLQQMETLRYALRHVKHENIRLRAQKMKSIMDELPPLKVPKKPVGI
ASPTGFVKLETEASSEKEEDTTASPSKDVAQLTRNTRKLMQDLHNLACPTVVDISHRKPG
TVPALEKATPKHQLVDRNCRIQDISKNLTQLKIEVQKLVTSLKPGAHVKSAFSQFTSTEY
SKVQEEKDQATNLGKVYIPLASGQQPTSYSLNLQPHQLKQLYARVLST
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccaggaaaatgatcagggtgatgtgtttccagattctactctccagtccact
ccgaaggtttcattgagagaaagacagagcatggctgagaagccagtcaagattggcacc
cgggtagagatcatcgggaaaggatggttaggaaaggtagcatttgttggaacaacaact
tttgcagcaggcaaatggattggtgttgtactggatgaaccgaagggaaagaacaatgga
accgtgcaaggcaagaagtacttctcatgtcctgataatcatgggattcttattcgacaa
tcgcaggtcagtatcttagatgatggagaccgcaccccttcacccgtaaccacgcccgct
tcatctagcagcattccgaaaccttccgcagccaagggcaaggttgatagtgccttagcg
tccaagcagtcgagagctgcaatgtacgccaaaaagttgacagaacgcaatttagagaaa
agtgccaataatggtggtagaaagtcatccattccttcgttgatgcggcggtccggcgac
attccaaccccgcgaagaagctcctccccatctggtatccaagcgccgaagtctatccaa
cgcccgtcgaccaagccaggcaccaagatcggaaagcctgcatcttcctcctcctcctct
tccaatgccccttcaccaactccggcctcagcccaggcccctgcccccgagccgttggcc
tcagtgagtagccagggtgatggatcctcgtcggaggaggcggagatcctcaagctggag
gtgaaggatctccaggagaagctggatacgttgaagatgaagagggcagaggacagggcc
aagctgaaggaaggggagaagatgaggattcagctccaacagctccaagagttcaagtcc
aagatgatggaggccaaggtcgatcttgaacgccagctccaggaggccaagaacgaagcc
agagaggccgtggaggagagggagcgccatgcagaggagatggctggtgtcgcagagacc
atcgaaatggctaccctcgataaggagatggctgaggagaaagctgacaccctccaacaa
gaggtggactcgctcaaagagcgtgtggaggagttgacccttgaccttgagctgttgcgt
agtgagatcgaagaaggaggaacggaaggtgcatcagccagctaccaactgaagcagctt
gaacagcagaacaatcgtctcaaggaagctctagtcaaactgcgtgacctgtcaaacact
gagaaacaggagcatcagcgagctcagaaggacaaggagaagctgtctcaagaactcaaa
gacatcaaggcacagaaagacagtaccaacaaagctcttaaggatgcagaaaataccatc
attgaactgaaagaacaggtggatgctgcactaggagcagaggagatggtggagagcctg
actgaaaagaatcttgagatggaagagaagttccaggaactagaggccaccatggctgat
ctcgaagcgatgaatgatatgaacgaggagctccaggagaacgcgagggagacagagatg
gagctgagggaggagctagacatgtccaagagccagatctctcaatatcaactcaagata
aatcaattccaggagaacatccaagatcaccaggagaccattgccaagttcaggcagctc
actgcttcccttcaggaaaagaatcgtgatctgctgaaccagacccagtccagtgaagcc
gatagctccccatccgaggctcctgcgtatgacttcactaccaagtttactgaagcaaaa
gtgcagtctaagactattgaggttgagcttcgtaagttggaggtgaaccaagccaacgag
catatccgtctcctcacatccttcatgccagactcattcctacgcagaggaggtgaccat
gattgtgtccatgtactgatgttggtgtctcgcatgctggccaagtctaagcttctcatc
agtcacattaaagataaggctgatataccggagacaatgaaccgagagcaggtacttcgt
cataaccatggggagcagctctctttcttcaactcactcaccttcatgatgcataaactg
aggacgatcctcaacaagtatcatactgcccttagtacctgcagtgtggagctcttctgc
aagattggaacgcttttccctgagatagcaccacatgaacgatgtgttgatcacatgcta
gatctcttgaaaaaggatcagcttgacgagaatgtctccatggagtccctggagcgagcc
attgaatacctagagcatctctacagcgttcatcttctccaggaggagattgatactact
aacctcatggcaaatcatatttctttcatgtcgtctggatccgactgtgtcgccctcgag
gtcaagaaattaagagttctcatgcaggccaatcaagagacggctgatttctcaatcttg
atgcgtgatatggagagtactaacacagatctcaaacagttcgcaagaatgattcgtcga
cgtctaccaagccaagctttggagtctaccatggatggtcctagtccaggcccaacctca
atctcctatggtgttgatgttcaaaactcgctttatgagagtgctgatcttatgatgaag
gtggtaaccgctttgaaggactgtggacaccatgccatgaagcatgctagctctcttgct
gacgaggcagtgaagaacaaaaacaagtccgatgaagaggaggccaaagatactgatggt
atacctgtgaagaagttggaacaacttgccgataggtcatcggaacttgcctttggaaag
gctgacaagggaccataccagagcttcagggaatgcctggtaaaggccatggtgattctg
aataagatcagcacagcaatgcaagagggagaatatgatgctaacattccacaagacaag
atccaacccccagttgaacgccgtgcagtaaaagtgaagtcagagatatgtgatgccgaa
ggacttggtcataaactcgagagtaaggaaagtgagatgaaagaaatgaaacgacaactc
aaacaaaagcaagatgaagtgagtacaagtcaggtccgtcttggtctggttgagaagaaa
ctagagaacgcaagccgtgatgctgaggacaaggtccgcaaggttgagcagaagctgtct
tcggctcaagaacaggcaaagaaaaaagaaaaagagtttgaggctaccttagaccatatg
caggtggacattgattctcttgagcaagagaagagtgaactcaagcagaggctgactcaa
ctatccaagaggacattgcttgacagcattaccaggaccacaccacagtctggtgtcgct
gtggctatgtcaggaggggctggacaaggttctggttcacctgccggccctgcagtaggg
tcagggggcggaggtcaggtcatggtcaaagattctcccatgttactgcaacagatggaa
acactacgctatgccctcaggcatgttaagcatgagaatattagattgagggctcagaaa
atgaagagtatcatggatgaattgccacctctgaaagtccccaagaagcctgttggtata
gccagccctactgggtttgtgaagctagagaccgaggcttcttcagagaaagaggaggac
accactgcatcacccagcaaagatgtggctcaacttaccaggaacactcgcaaactcatg
caggatttacacaaccttgcctgtcctactgtggttgatataagccaccgtaaaccaggc
accgtgccggccctggagaaggccacgcccaagcaccagctggttgataggaactgccgc
atccaagatattagcaagaacctcactcagttgaaaattgaggtgcagaagttggtgaca
tcactgaagcctggggcgcatgtcaaatctgccttcagtcaattcacttcaactgaatat
tccaaggtccaagaggagaaagaccaagcaaccaatctaggtaaagtctacatccctcta
gcgtccggacaacaaccgacgtcttactccctcaatctacagccccatcagctcaaacag
ctctatgctagggtcctatcaacataa
DBGET
integrated database retrieval system
