Lytechinus variegatus (green sea urchin): 121424658
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Entry
121424658 CDS
T11173
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lvg03036
]
121424658
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lvg00535
]
121424658
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121424658
Meiosis-specific proteins
Cohesin complex and associated proteins
121424658
Proteoglycans [BR:
lvg00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
121424658
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
NOCA1_mid
AAA_29
Motif
Other DBs
NCBI-GeneID:
121424658
NCBI-ProteinID:
XP_041476327
LinkDB
All DBs
Position
12:27303162..27341852
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AA seq
1208 aa
AA seq
DB search
MYIKQVTIQGFRSYRDQTIVDPFSPKHNVVVGRNGSGKSNFFYAIQFVLSDEFNNLRPEQ
RQGLLHEGTGPRVISAFVEIIFENSDNRIPIEKEEVTLRRVIGSKKDQYFLDKKMVTKTD
VMNLLESAGFSRSNPYYVVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKAESQTILK
ETEGKREKIQDLLKYIEERLQTLEEEKEELKQYQKWDKMRRSLEYTIHNQELMDTRKKLE
DLANKRENSGEMTKHIRDAQEEASKRIKTINKELRELKGRLRTANEERDHLTNERQDLFK
RRAKLELAVKDLQEEVKGDVDAKGRIEIQLEKLDTEIGSKQGELEAIMPRYEDLQRKEEQ
CTARLQQCEQRRTELFAKQGRGNQFTTREDRDKWIRKELKSLNKSIKDKEEQISRLHDDI
ASDIRKNEDLEGRMAKLNIDIEQMKDTVEGSNRSHYDLKKRKDDLQNERNALWRQENSIQ
QEIATTREELHKKEQTLRSMIGKAVLRGIDSIKRVLDNFREKNIHRDVQEGYHGVLIENF
SCASRFNTCVEVTAGSRLFYHIVDTDMISTKILSEMNKQKMPGEVTFMPLNRLEVRDTVY
PESPDALPMVSNLEYDDTLANVYKHVFGKTLICRNIEVATSFSRTQNLDCVTLEGDQVSR
KGAITGGYYDTRKSRLELQSGIVELRTRLSNQEQEYKELRDKLQKVEVDITSLMSDMQKI
ETKNRKNKDIYDKMRSDMRIMKEESQVIQKSMAPKERRQQSLNTNLEAMRSTASSLEEEI
GTDLLSQLSMGDQREVDSLNDEIKDLNQQNKKALAERVKLEGQKNKIENYLSGNLNRKRE
QLMQELQEISVEDRRQKLENNTMEMQTADTAIDTNKARLEDIDAQLEGLNREQSSKQGDL
EEWKSKEREFGDKIQDDAKMLEKMTNKQSLLLKKKEECMRKIRELGSLPSDAFEKYTHLS
LKALFRKLEQCNQELKKYSHVNKKALDQFVNFSDQKEKLIKRKDELDSGHAAITDLMNVL
ELRKYEAIQLTFKQVSKYFSEVFEKLVPGGKATLVMKKGDYETSQELESEGPSGSSGLPL
VEQFTGVGIKVSFSGKAGETREMQQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDSAL
DAMHRKAVADMIHELAANAQFITTTFRPELLESADKFYGVKFRNKVSHIDVISKDQAQDF
LEDDVAHT
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggtaacgatacaagggtttcgatcctacagggatcagactattgtg
gatcccttcagtcccaagcataatgttgttgttggaagaaatggatctggaaaaagcaac
tttttctatgccatccagtttgttctcagcgatgagttcaacaatctacgtcctgagcag
cgtcagggtttgctgcatgaaggtactggtccaagggtcatttctgcctttgtcgagatc
atctttgagaacagtgacaacaggatccctattgaaaaagaagaggtgaccttgcgtcgt
gtcatcggatctaagaaagatcagtatttcttggacaagaaaatggtcacaaaaactgat
gtaatgaatttgctggagagtgcaggattttccaggagtaatccttattacgtggtcaaa
caaggaaagattaaccagatggctacggccccagattctcagcgtctcaaactattgaga
gaagtggctggtaccagagtctatgatgaaagaaaggcagagagtcagacaattctcaaa
gaaacagagggtaaaagagaaaagatccaagatttgttgaagtacattgaggaaagacta
cagacactggaggaagagaaggaagaactcaagcagtatcaaaaatgggataagatgagg
agatcccttgagtatactattcacaaccaggaactcatggacacaaggaagaaactagaa
gatcttgccaataaacgtgagaatagtggagagatgactaaacacatcagagatgctcag
gaggaagcttctaaaaggatcaagacaatcaacaaggaacttcgggagttgaaaggtcgg
ttgaggacagccaatgaagagagagatcacttgacaaatgagagacaagatcttttcaag
cgccgtgccaagctggaattggccgtcaaagatttgcaggaagaggtcaagggtgatgtg
gatgcaaagggtcgtattgagatccagcttgaaaagttagacactgagataggtagtaaa
caaggcgagcttgaagccataatgccacgatacgaagatcttcaacgtaaggaagagcag
tgtacagccagattacagcaatgtgagcagcgccgtacagagctctttgccaaacaaggt
cgaggaaaccagtttaccacaagagaagatagggataaatggatacgcaaggaactgaaa
tctctcaacaagtccatcaaagacaaagaagaacagatctccaggctgcatgacgacatc
gcctctgacatccgtaaaaatgaagatcttgagggaagaatggccaaactgaacattgat
attgagcagatgaaggacactgttgaaggttccaacaggagtcactatgatctcaagaaa
cgaaaagatgacctacaaaatgagcgcaatgctctatggagacaggagaacagtattcag
caagagatcgccacaactcgggaagaactacacaagaaagaacagacccttcgatccatg
attggaaaggctgtactgcgtggtattgacagtatcaagcgagtcctggataacttccgt
gagaagaacatccatcgagatgtccaggaaggctaccacggagtcctgattgaaaacttc
tcctgcgcgtcacgctttaacacctgtgtggaggtcactgctggcagcagattgttctac
cacattgtggatacggatatgatcagtacaaagattctatctgagatgaacaaacagaag
atgcccggtgaagtgaccttcatgcctctgaaccgcctagaggtccgagatactgtctac
ccagaatcaccagatgctcttccaatggtatccaacctggagtatgatgatacgcttgct
aatgtctacaagcatgtctttggaaagaccctgatctgtcgtaacattgaggtggctacc
agcttttctcgaacccagaaccttgattgtgttaccctagaaggtgatcaagttagtcgc
aagggagccatcacaggaggctattatgacacgcgcaagtctcgattggagcttcagagt
ggcatcgtggagctgagaacccggctgagtaaccaggagcaggagtacaaggagctgaga
gacaagctgcagaaggtggaggtggacattaccagtctcatgagtgacatgcagaagata
gagaccaagaatagaaagaacaaggacatctacgacaagatgcgaagtgacatgagaatc
atgaaggaagagagtcaggtcatccagaaatcgatggcacccaaggaaagacgtcagcag
agtctgaataccaacctagaggccatgcgtagtacggcatcgtcactggaagaggaaatt
ggtactgatttactttcccagctgagcatgggtgaccagagagaggttgacagtttaaat
gatgagattaaagatttgaatcagcagaacaagaaagcccttgctgaacgagtcaagctt
gaaggacagaagaataagattgagaactacctctctgggaacctgaataggaaacgagaa
cagctcatgcaggagttacaagaaatctcagttgaagatcgccgtcagaagcttgagaat
aatacaatggagatgcagactgccgatacggccattgataccaataaggcaagactagaa
gacatcgatgctcagctggaaggattgaatcgggaacagagcagtaaacaaggtgactta
gaagaatggaaaagcaaggaaagagaatttggtgataaaatccaagatgatgccaagatg
cttgagaagatgaccaataaacagagtttgctcctcaaaaagaaagaagaatgtatgcgt
aagatccgagagctgggatccctgcccagcgatgcctttgagaagtacacccacctctcc
ctcaaggctctcttcaggaagcttgaacagtgtaaccaagagctcaagaaatacagccac
gtcaacaagaaggccctcgaccagtttgtcaacttctcagatcagaaggagaagctcatc
aaacgcaaggatgagttggacagtggtcatgctgcgatcactgatctgatgaatgtcctt
gaactgcgtaaatatgaagccatccagctgaccttcaaacaggtgtccaagtacttcagt
gaggtctttgagaagttggtacctggaggaaaagccacactggtcatgaagaaaggagac
tatgaaacatctcaagagcttgagagtgaaggaccatctggatcaagtggacttccatta
gtagaacagtttacaggcgttggcatcaaggtgtcattttctggtaaggctggtgaaact
cgtgagatgcagcaactgtcaggtggtcagaagtcccttgttgcccttactctgatcttt
gccatccagaaatgtgatcccgctcccttctacctctttgatgagattgactcggctcta
gatgccatgcataggaaagcagtggctgatatgatccatgagcttgcagctaatgctcaa
ttcatcacaacgaccttcaggccagagttactggaatcggcggacaagttctatggtgtc
aagttcaggaataaggttagccacattgacgtgatcagcaaggaccaagcgcaggatttc
cttgaagacgatgtcgcccacacctaa
DBGET
integrated database retrieval system
