Lytechinus variegatus (green sea urchin): 121424710
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Entry
121424710 CDS
T11173
Name
(RefSeq) prominin-1-A-like
KO
K06532
prominin 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvg04147
]
121424710
04090 CD molecules [BR:
lvg04090
]
121424710
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121424710
CD molecules [BR:
lvg04090
]
Proteins
121424710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
ssDNA_DBD
DUF4077
Motif
Other DBs
NCBI-GeneID:
121424710
NCBI-ProteinID:
XP_041476392
LinkDB
All DBs
Position
12:complement(34448604..34487681)
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AA seq
808 aa
AA seq
DB search
MSVRMTPPRTCSTPRLYEFVIVCAVLLGVVQGFSEDNGVIKWDAFPPEPDYQSGLLQMPH
TLRDINTVAVAFIQALPPKELPWDLYRGIINGTVDFSDPMLYVDHTVAFMALFAIAVIFM
IFMPITGIIFCCCRCCDRCGAHMLQREEDNVPWKRAGFACGLLIVSIIMTIGIGISFIAN
QNVSSGLRKVEPNIQTNMDDLIMYVNQTVDEIDFLLDQVDKVKNLAVKKLDNISITVGEP
VRDKLRVKVEPAIIAVKELHRDAYDAHVLLNKTNDLIQELQFSAMILTDSLRDERWFLNE
TLQSSACFQSEGCRAARGLIDLNRLSLSTHYNQTNIEDLLMQASQALESDLTSYAVSTQA
ILDSIPQRIEEEGSSHVQEIKQMVDDLYAGGASGIVDNARNLSQVVIDQITAIFSQSSDQ
PVSQMLYQSLHMAVTYDQYRFYCGIGSVCVFIIIILCNYLGVLFGECGRDKRDQPTERGC
LSNLGGTLLLAGVAFGFLFSALLMLMTTIFFLAGGGTEKGICQPIETRALLRELIDYPYL
LDQGEASFLGSVLLSDGSHTVSAENIINKCEQNAAILTTVDTNITTTIAELLLNYNKSSE
LNSSFVLESMDLSNFTTLDSRVVSSLTRIRDAGNNINITGVLQEISQSITKVNLTDYATI
LRTTANRENNVTLYDKLRGHAYKLTTLTNTFVKPMQSKVNVLKSKLTALHSKTNYLSALI
NGTLTGINEVELFVNTDGPLILDEEIKRFRDHLVGYLEQTADHIIYELTTDFGHCRPIAA
VYSSLDVVLCDYTSDSLENNFPLWLVPL
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcagaatgactccaccaaggacttgtagtacaccaaggttatatgagtttgtg
atagtttgtgcagtgcttctaggagtggtacaaggattcagtgaagacaatggtgttatt
aaatgggatgcattcccaccagaaccagactatcaatcaggacttcttcagatgccacat
acattgagggatattaataccgtagcggttgctttcatccaagctctaccacctaaagaa
ctaccatgggatctttacagaggaataatcaatggaactgtagacttttcagatccaatg
ttgtatgtggatcacacagtagcgttcatggctctgtttgccattgcagttatcttcatg
atattcatgcctataactgggatcatcttctgctgctgtcgttgctgtgataggtgtggc
gctcacatgctacaacgggaggaagataacgtaccatggaagagggcgggctttgcctgt
ggtctactcatcgtctccatcattatgactataggtattgggatatcattcattgcaaat
cagaacgtatcttctggactacgtaaagttgaacccaacatacaaaccaacatggatgac
ctcatcatgtatgtcaatcagacagttgatgagattgattttctattggaccaagttgac
aaagtgaaaaatcttgcagtgaagaaacttgataatatcagcattactgttggcgaacca
gtgagggataagcttagggtcaaagttgaacctgccatcattgctgtcaaagagcttcat
agggatgcatatgatgcgcatgtgcttctcaacaagacaaatgacctgattcaggagctg
cagttctcagctatgatccttacggactccttgagggacgaaagatggtttctcaatgaa
accctccaatcgtcagcgtgctttcagagtgaaggatgcagggctgcgagaggtcttatt
gatcttaatagactctcgctttcaacgcactataatcagacaaacattgaagacttactt
atgcaggcatcacaggcgttagaaagcgatcttaccagttatgccgtcagtacacaagct
atattagattctattccacaaagaattgaagaagaaggcagctcacacgtacaagaaatc
aagcaaatggtggatgatctgtatgctggaggtgcttctggcattgttgataatgctaga
aatttgagtcaagttgtaatcgatcagataacagcaattttcagccagtcttcagatcaa
ccagtttctcaaatgctttatcaaagccttcatatggctgttacatacgaccagtatagg
ttctattgtggtataggttcagtgtgtgtattcatcatcattatcttgtgtaattatctt
ggagtattatttggtgaatgtggtcgagataagagagatcaacctacagagaggggatgt
ctgtcgaaccttggtggaactctgctccttgctggtgttgcatttggatttttgttttct
gctctgttgatgctgatgacaaccatcttcttcttagctggaggaggaactgagaaagga
atatgtcaacctattgaaacaagggcattattgagagagcttatagactatccatatctc
ctagaccaaggagaagcaagttttcttggatccgtcttactgagtgatggcagtcatacc
gtcagtgcagaaaacatcatcaataaatgtgaacagaatgctgctatcctaacaacagtt
gatacgaacataaccaccaccattgcagagctcttacttaactacaataagtcatcagaa
ttaaattcctcgtttgtgttggagtccatggacctttctaatttcaccacattggacagc
agagtagtatcttctctcactcgtatccgagatgccggaaacaacatcaatatcactggg
gtactacaggagataagtcagagtattacgaaagtaaacctgactgactatgctaccata
ctgaggactacagctaacagagaaaacaatgtgacactgtatgacaagttgcgtggtcat
gcttataagctgaccacactgaccaatacatttgtcaagccgatgcagtctaaagtgaat
gttttgaagagtaagctgacagcattgcatagcaagacaaattacttgtcggccttgatc
aatggaactttaacaggcattaatgaagtagagttattcgttaacactgatggtccactt
attcttgatgaggaaatcaaacggtttagagatcatttagttggttaccttgaacaaaca
gcagatcacatcatatatgagcttacaacagattttggtcactgcagacctatagcggca
gtctattcttcccttgatgttgtcctgtgtgattatacatcagattcactggaaaacaac
tttccactttggttggtgcccctgtaa
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