Lytechinus variegatus (green sea urchin): 121424800
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Entry
121424800 CDS
T11173
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvg04147
]
121424800
04090 CD molecules [BR:
lvg04090
]
121424800
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121424800
CD molecules [BR:
lvg04090
]
Proteins
121424800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
ATG17_like
DUF2207_C
Mod_r
NET2A
COG6_N
Motif
Other DBs
NCBI-GeneID:
121424800
NCBI-ProteinID:
XP_041476515
LinkDB
All DBs
Position
12:complement(13890949..13999610)
Genome browser
AA seq
1211 aa
AA seq
DB search
MALFLRTRNCVLAVKLFTFLVILSCVTDFTGAQDPSLDPKNNSIIRWGELPPVPMATNVT
PSGSRPSTLAVMAEGFVDVVQPNGLPLDYIQFALETTVYNNTSYYEDNWQTEMWKIMGLF
VGIIVCVLFGILYFIIVPITGFIFSCCRCCDRCGGKRVQRETKHMGCKRVTLSLFFFSFT
GIICAGMAFTNVSNEFIKTSVDVFKVTADSALGDLESYFMAVNEQIEYMVDTEYAYVDTL
LTTNLEDIGTEIGDPIEEYLLDEAGLQEVIDSVSNVSSTFDDMEEALNEIESLRSELIDQ
SSELENELNQVASDLDAINLACSNCITGIDQLVINVNYTELPSVQPQIEGVEEANNLTKN
ITQEINAVLGDIPNQIDTMTQDEVQAALDQLEDAEKEVRGSFDDINVTISDVVGTLSDAK
GTLDDSWGDVEVYQQYVYYALIGVTCTVLLIIMFNLIGLTMGTFSYKNVHPMERSRMSNA
GGNVLMAGVFFTFFFAPILMLITCVAFGVMSVTTLSCDPLLSYDLLRKTIDEPNTISEGY
YLGDLVYQDSSIPLTASGILTECGNGSTAYTAFKLDTLYDFGNLTQQLDSLEDEFDKIIN
SVNPNDLNYDFQFADFTDDLDKLKNTTDLGSINYTQYDALLNEDITGINLTVYANNLTDL
AANHPTLGPNITAAADAIMNIQVTIVEPMEANAAAISSQLMTIQDLENQLDEQIIQTNIA
ITDAEAAIDSNATSEAIIDISEEYANRLLGYGTQYSEQIENQVENEFAKCKLISSLYDSS
IEFTCDYPIASLNTFWFTVGWCVFFYVPSIIAAVKLAKYYRIMDEDAPYRAPKKSKKKKK
QQRRDSDEEMPMDDMDHGTGYVAPMHGNNRHQQVVGPDNIRLVDNGRPTSMMPQQNPHYV
QDEPIMAYNDLGRPMAPPPAYNPGRSKIARNKLAVFKEMLKDQEENAFAGPSTSTAGGAS
RNGVLFGTFGDRQMSFEEGEWYQFQNTSNMASALQRSISSRQPSFDDRKSWSRQQSSIDR
GWLWGRQQAIDEDHLSPDTGLSHRSRDSSFEDVFSASGRLSPMMYRMPSDPFSNLPPPPP
SLLCAAIHQHSSGYYPQEPSPPPPPPPPIIPIYSVPNNLLSPPQQFRPSGRRLVRQYRTS
ASPTLPIRIIPPPPDYPPEPPMSDTSSPSSSRSPPLPPPPPSPPPSPPLIASSPLPRPRP
IPPPRLSVNVD
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggctttatttttacggactagaaactgcgttttagcagtgaagcttttcacatttctg
gtaatcctgtcctgtgtgacggacttcacaggagcgcaggatcctagtttggatcccaag
aataatagtattatccgatggggtgagctgcccccggtccccatggctaccaacgttacc
ccatcaggatccagacccagtacgcttgccgttatggcagaagggttcgtggacgtcgtt
cagccaaatggcttgcctctggattacatccagtttgctctagaaacaactgtctataat
aatacttcatactatgaggataattggcagacagaaatgtggaagattatgggtctgttc
gtgggcatcatcgtgtgcgtgttgttcggcattctctacttcatcatcgtgcccatcacg
gggttcatcttcagctgctgtcgatgctgtgatcgatgtggaggaaagagggtacagcga
gagaccaagcacatgggatgcaagagggtcactctcagcctcttcttcttctcattcact
ggtatcatctgtgctggcatggctttcacaaatgtttccaatgaatttatcaagacatcg
gtagacgtctttaaagtcacagctgacagcgctctgggagacctagagtcctacttcatg
gcagtaaacgagcaaattgaatacatggtggacacagaatatgcatacgttgacacatta
ttgaccacaaatttagaagatattggaacagagattggtgatcccatagaggagtatttg
cttgatgaagctggccttcaggaagtgatcgattctgtttcgaatgtttcttccactttt
gatgacatggaggaggcactgaatgagattgaaagtcttcgttcagagctgatcgaccag
tccagcgagttggagaatgaactgaaccaggtggcttcagatctggatgcgatcaattta
gcctgtagcaattgtataacaggcatagaccaacttgtaattaatgtgaactatactgag
ttgccatcggtacagccacaaatagaaggagttgaagaggccaataatttgactaaaaat
atcactcaagagatcaatgctgtccttggtgacataccaaaccaaatcgacaccatgaca
caggatgaggtccaggcagcactggaccaacttgaggatgcagagaaagaagtcagaggc
agcttcgatgacatcaacgttacaatttcagatgttgttggaacactttcagatgcaaaa
ggaacgttggatgactcttggggagatgtcgaggtttaccagcaatatgtatactatgcc
ctgataggtgtgacttgtacagtcctgttgatcattatgttcaacctaatcggtcttacc
atgggcaccttctcctacaagaatgtccatcctatggaaaggtccaggatgtccaatgct
ggtggcaatgtcctcatggctggtgtgttcttcactttcttctttgccccaatcctgatg
ttgataacatgtgttgccttcggtgtcatgtctgtgacaactctaagctgtgatcctctg
ttgtcctatgatcttcttagaaagactattgatgagcccaacacgatatctgaaggttac
tatctgggagacctggtataccaggattcatccatcccactgactgcttcagggatcttg
acagaatgtggcaacggttctacagcatacactgccttcaagcttgatactctgtatgac
tttggcaaccttacacagcaactggattctcttgaggatgaattcgacaagatcatcaat
agtgtcaaccccaatgatctcaactatgacttccagtttgcagacttcacagatgatctc
gataaactgaaaaatactacagacttgggttcaatcaactacactcagtacgatgcactg
ctgaatgaagatatcactggtatcaatctaactgtatatgcaaataatctaacagactta
gctgcaaatcatccaactctgggtcccaatattacagcagcagcagatgccatcatgaat
atccaagtgaccattgttgaacccatggaggcaaatgcagccgcgatatcgagccaactg
atgaccatacaagatttagagaaccagttggacgaacagatcatccagaccaacattgcc
atcacagatgcggaggctgcgatagatagcaacgctacctcggaagcgatcattgacatc
agtgaggagtatgccaacagactgcttggctatgggacccagtactctgaacagattgag
aatcaggttgaaaatgaatttgccaagtgcaagcttatttcatctctttatgacagctct
attgagtttacatgtgactaccctatagcttcattgaacacattttggttcacggttggc
tggtgtgtcttcttctacgtcccatccatcatcgctgcggtcaaattggccaagtactac
cgcatcatggatgaagacgcaccctaccgcgccccaaagaaatccaagaagaagaagaag
caacagcgacgagattctgatgaagaaatgcctatggatgatatggatcatggaactgga
tatgttgctcccatgcatggcaataatagacaccaacaagtggtaggaccagacaacata
cgtttggtagacaatgggcggccgacgagtatgatgcctcagcaaaacccgcattatgtg
caagatgagcccatcatggcatataatgacctaggtcgccccatggctcctccaccagcc
tacaaccccggtcgatcaaaaatagcaaggaataagttggctgttttcaaggaaatgttg
aaagaccaggaggaaaatgctttcgcaggcccaagcacatcgacggcaggtggggccagt
cgcaacggagtcctgtttggaacgtttggagacagacagatgtcatttgaagagggagaa
tggtatcaattccagaacacttctaatatggctagtgcactgcagcggtccataagcagt
aggcaaccgtctttcgacgaccgcaaatcctggtcccgtcagcaatccagtatagacaga
ggttggctatggggaaggcagcaagctatagatgaagaccatttgagcccagatacaggc
ctgtcacaccgtagtagagactcctcattcgaagatgtattctcagctagtgggagatta
agtcccatgatgtatcgcatgccctccgaccctttttctaacctcccccctcccccgccc
tccctcctctgtgcagccatacaccagcactcctcagggtactacccccaggagccatcc
ccaccccctcctcccccacccccaatcatccccatctactcagtccccaacaacctccta
tcccctccccagcaattcaggccgtccggccgtcgcttggtcaggcaatacaggacttcg
gcttccccgactttgccaatacgcatcatccctccccctcccgattaccctccagagcct
cccatgagcgatacatcttccccgtcgtccagtcgatccccacccctgcctcccccaccc
ccttcccctcccccatcaccccctctcattgcaagttctcccctcccaagaccgagacct
ataccccctcccagactctctgttaatgttgattaa
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