KEGG   Lytechinus variegatus (green sea urchin): 121424883
Entry
121424883         CDS       T11173                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
lvg  Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lvg03036]
    121424883
   03400 DNA repair and recombination proteins [BR:lvg03400]
    121424883
Chromosome and associated proteins [BR:lvg03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    121424883
DNA repair and recombination proteins [BR:lvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     121424883
SSDB
Motif
Pfam: MMS19_N MMS19_C PDS5 TOR1L1_N HEAT_2 HEAT_ECM29 HEAT_EZ
Other DBs
NCBI-GeneID: 121424883
NCBI-ProteinID: XP_041476664
LinkDB
Position
12:complement(3719718..3747836)
AA seq 1015 aa
MAATMWTEAIENYVRGEQKEALKLITAEITNGQKTVDDFVDSMGTYLMSNETRIRARGVE
LMSEVLTSLPRTFLNQQQIQVLIEFLCARLLDHHSITQHTLKGLLPMTSQSSFPASLSVQ
VMTAIFKEVQVQTMLQVDRRTVYNIISNLLRTSLTELQGMGSEFVLGFLHAMDGEKDPRN
LILLFNILPTVINNFKIDMFIEETFEVVACYYPVDFHPPPNDPYGISREKLAQSLKTCLS
STPKFAQFCLPMIMEKLSSDLQTARLDSYQLLQACAPVYSQSDIMSYIEAIWSYCRKELM
LGISVELDKEAAKTLGAVVTAVSSGIQSTSGGSGDGDLNSFLRNILTECRQHLCEPDHRM
IHPCSKLLVAIAAASYPACIAILKYAVPILLDQFNIFDQTRERMVLLDILERLLHSSQGH
IKEPEDWRTLFAHHMDTVVTTVLSSFARDQGVPDLRKIGLGTLREMVQVPILMDQSRLEL
VGQELTRVLLEEGDEGVRCECIKTVSSLAKKHTDFVKSTILTSLWTTAQRGGPGYQRIVV
DMATIVTNTSDDLSRSLTSELVSEIAKPKLSSDQHLVYLATLETLTANLSSTPSNLESLL
ASVVYPLLKMVVSATLQSSTEAGISPHCCGEVLVAIAKVIRVVVPRLDNSMGIKLCQCAI
DVFLHGELSSLELTNHNTSVPFLPLAPHAPGHQTQLVTVLQPIVCSLRREVHLPSSKQLM
SSLLHISAHSTVWLTSTWATKALAGVINKHQAGSDLDEVLVEAESLLGRAISSMEEGSSK
ERALMAWVLLTKALVMRSHPKATTFLTTLLRLLEDEDLGDQVPQTLGMLLEDMEDVLSEE
LHSDIKIMYKQRVFLQALPFVMALFNKDNLQTRAITALCHLLPSIPRPVLLAELPPIIPR
LVQSLRVTDPRPTLPILDILESLLGETLPSLVDQIDNLIPTLLELSSYQASLKVRIASLK
CIGAVTSFPHHIIYPHQETVVRALAPRLDDKKRLVRQEAVKARTKWILLQQDTKR
NT seq 3048 nt   +upstreamnt  +downstreamnt
atggcagccaccatgtggaccgaggcgatagaaaactacgttcgtggcgaacaaaaagaa
gctttgaagttgattaccgcagaaatcacaaatggacagaaaacagtggatgattttgtt
gacagcatgggaacctacctgatgagtaacgaaaccaggatccgtgctagaggggtggaa
ttaatgtctgaagtactgacaagtttaccaagaactttcctcaaccagcaacagattcaa
gtcctgattgagtttctctgtgctaggctgttagaccaccactctatcacccaacacact
ctcaaaggtttgctgccaatgacttctcagtccagctttcctgccagtttgtcggttcag
gtgatgacagcaatctttaaagaggtccaggtccagaccatgctacaggtggaccgtaga
acagtctacaacatcatatcaaacctacttaggactagccttacagagctacaaggcatg
gggtcagagttcgtcctcggcttcctccatgctatggacggtgaaaaggacccaaggaat
ctcatcctcttattcaacatcctaccgaccgtcatcaacaacttcaagattgatatgttc
attgaagagacttttgaggttgtagcctgctactatcctgttgactttcaccctccaccc
aacgatccatatggtatctcaagagagaaactggcacagagcctcaagacatgtctctcc
agtacccctaaatttgcgcagttttgtctgccaatgatcatggagaagttaagctcagac
ttacagacagcacggttagactcctaccagctgttacaagcatgcgcaccggtctacagt
cagagtgatatcatgtcctacatagaagcgatctggtcatactgcaggaaagagttgatg
ttaggtatcagtgtagagttagacaaggaagctgcaaagacattaggtgccgtggtaaca
gcagtttcatctggtatccagtctacgtctggtggtagtggggacggagatctgaattca
ttcctcaggaacatattaacagaatgcaggcagcatctttgtgaaccagaccatcggatg
atccacccctgcagtaagcttctggttgccatagcagcagcatcatacccggcttgcatt
gccattctcaagtatgccgtccccatcctcctagatcagttcaatatatttgaccagacc
agagaaagaatggtcctattagacatccttgagagactcctccactccagtcagggtcac
atcaaggaaccagaggattggagaactctctttgcccatcacatggacactgtagtgacc
actgtcctgtccagttttgccagggaccagggtgtgccggacctcaggaagattgggcta
ggaaccctgagggaaatggtccaggtcccgattcttatggaccagagtaggctggaactt
gtgggacaagaactgacaagggttctgctagaagaaggagatgagggtgtgaggtgtgag
tgcataaagacggtatctagccttgccaaaaaacacacagactttgtcaagtcaacaata
cttacgtctttatggaccactgcacaaagagggggtccaggataccaaagaatagtagtt
gacatggcaaccatagtaacaaatacgtcagatgacctcagcaggtcgctgacctccgag
cttgtgtcagaaatagctaagccaaaattaagttctgaccagcatctagtgtatcttgcc
acgttagaaaccttgacagccaatctttccagtacaccttcaaatctagagtccctccta
gcatctgttgtctaccctttacttaaaatggttgtgtccgccactctacaatccagtact
gaagctgggatcagtccacattgttgtggggaggttctggttgccattgcaaaagtgatt
agagtggttgttccaagattagataacagtatggggatcaagctatgccagtgtgctatt
gacgtattccttcacggggagttaagcagtttggagctaacgaatcacaacacatcggtg
cccttcttaccattggcacctcatgcaccaggccaccagacacagcttgtcacagttctc
caaccaatagtgtgttccctgaggagagaggtccatctaccatcctccaaacagctgatg
tcaagtctacttcacatatcagctcatagtactgtgtggttgactagtacctgggctact
aaggctttagctggagtcattaataagcaccaagcagggtcagatttagatgaagtctta
gttgaagcagagagtcttttaggtcgagcaatatctagcatggaagaaggatcaagcaaa
gaaagagctcttatggcttgggtcttgctgaccaaggctcttgtgatgcgttcccacccc
aaggcaacaacattcctcacaacattactcagacttcttgaagatgaagatcttggtgat
caggtccctcaaacccttggcatgctcctggaagacatggaggatgtactgagtgaggaa
cttcactcagacatcaagatcatgtacaaacagagggtcttcctgcaggcacttccattt
gtcatggctctttttaacaaagataacctgcaaacaagagccatcacagccctatgccat
ctactccccagcataccccgccccgtcctgctggcagagttaccccccatcataccccgc
ttggtgcagtccctcagggtgacagacccacgccccacccttcccatcttggacatcttg
gagtctctacttggggagacactgccctcattggtggatcagattgataaccttatacca
accctcttggagctgagttcctaccaagcttctttgaaagtgcgcatagcatctctgaag
tgtataggggctgttacctctttcccacatcatataatttatccgcatcaggagacagtg
gtcagagcattagcaccaaggctggacgataagaagagactggtcagacaggaggcggtc
aaggctcggacaaaatggattctgctacaacaagacacaaagagataa

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