Lytechinus variegatus (green sea urchin): 121424990
Help
Entry
121424990 CDS
T11173
Name
(RefSeq) prominin-1-like isoform X1
KO
K06532
prominin 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvg04147
]
121424990
04090 CD molecules [BR:
lvg04090
]
121424990
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121424990
CD molecules [BR:
lvg04090
]
Proteins
121424990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
DUF2207_C
DAP10
Motif
Other DBs
NCBI-GeneID:
121424990
NCBI-ProteinID:
XP_041476836
LinkDB
All DBs
Position
12:complement(30036105..30094722)
Genome browser
AA seq
750 aa
AA seq
DB search
MEKPNRTYLHVMCLGTLIACFAIHGTTAAGNVSVNINGTITYADLPEGRPYSSPAEFDEG
SFPLPTTWDFIGNFLSSVSPGEPPYELINAIIGDPSSIDLSLLTGNITRYQRNLMGFAIC
FVLGLLFVLIFPIVALCFCCCRCCCKNCGGKMHMDQKDNSCCRVMIYSICLLASLVFVFS
GAVTALCISGYTGSQATTLPTRVSDNILDFVRYLNNTLEEIDFVMTDQLSFTLDQVRTDL
NDIGTLVGVPVRESLRTNVGPAIDAVIDMEENINGTLFYMEAIDTRQARMEINYEILSTN
LTAILNDLTTLCGSCGCCSNATTQLRDVEIDADYRDINVTDSAQSIGSFPQVLVSQSIVE
LTDVANRNISDQAQEGYQTFEDIPDTLTNTTSSEVGDIISTIDGLEDTLNQFINETTFTL
QSTSGSIEPFEEQANNILSTYANDYDQYRAIVMYVFYGFILFIVVLFLLGLLIGVFSYDR
NASPTDRGSCSNCGGLFLMAGAGFVFIFGTFMMLITALTFIIGGPIDRLMCDPLVSGQLF
AQTVDLEDGILDDGYYLGNLIFSDPSVPFQISGFLDACEQNEAVYTAFLLENLFNVTQFT
DISSQIPDVDDQFSNITGDFSSVQILTSDTKDTLIDFRDSPADTIDWTIFTNELDTSLLY
DGDGNNDTLVELINALGIDADAASGSDKTDLNAIKDDLQTLQDEIVDVLLNDAVLIAREI
DSLTAYTDDIDVSIYSTLCACNPSCGEVTN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaccgaacagaacttatctacatgtaatgtgcttgggaacgttaattgcgtgc
ttcgccattcacgggacaacggcggctggtaacgtttcggtgaatatcaatgggactatc
acatacgcggatctcccagaaggacggccatactcctcgcccgcagagtttgacgagggt
agcttcccattgccaacaacatgggattttattgggaactttctatcatcagtttcccca
ggagaacccccatatgaattgatcaacgccatcataggagacccttcaagtatagatctt
tccttgctcacgggtaatatcacaaggtaccagcgaaatctgatgggcttcgcgatctgc
tttgtcctgggattgctctttgttctcatctttcccatcgtagccctttgtttctgctgt
tgccgatgttgctgcaagaactgcggtggcaagatgcacatggatcagaaggacaactcc
tgttgccgagtgatgatctactccatttgcctcctagcttcactcgtctttgtcttttcc
ggtgctgtgacagccctgtgcatcagtgggtatacaggcagccaggcaacgactctccca
accagagtcagcgataatattctagattttgtgagatacctgaacaacacccttgaggaa
attgattttgtaatgactgatcaactatcgtttacactggatcaagtcaggaccgatctg
aatgatattggtactttagtcggtgttcctgttcgggagagtctccgaacaaatgtaggc
ccagctatcgatgcagtcatcgacatggaggagaatatcaatggaacgctgttctacatg
gaagcgattgatacccgccaggctcggatggagattaattatgagatccttagcaccaac
ctgacggctatcttgaacgacctgactaccctgtgtggttcttgtggctgctgctctaac
gcaacaacccagctgagggatgttgagatagatgcagactatagggatatcaatgtaact
gattctgctcagagtatcggaagcttcccacaagtcttggtgagccagtcaatcgtggaa
cttactgatgtagccaatcggaatatcagtgaccaagctcaagagggatatcaaacattt
gaggacatcccagacacattgactaatacaacttcatctgaagtaggagatattatttct
accattgatggactggaagataccttgaatcagttcatcaacgaaaccaccttcactctc
caaagtacatctggaagcattgaaccttttgaggaacaagcaaataacattttgagtact
tacgcaaatgactatgatcagtacagagccattgtgatgtacgtcttctatggattcatc
ctcttcatcgtcgtcctgttccttctcggtttgctcatcggagttttctcatacgaccgt
aatgcctcacccaccgaccgtggttcttgctctaactgcggtggactcttcctgatggct
ggtgctggctttgtttttatctttggaaccttcatgatgcttatcactgcgttgacgttc
atcatcgggggaccgattgaccgtcttatgtgcgacccactcgtttcaggacagctcttt
gcccagactgttgatttagaagatggaatcttggacgatggatactaccttggaaatttg
atctttagtgacccctcagttcctttccagatcagtggattccttgatgcgtgtgagcag
aatgaggctgtgtatactgcattcctactggagaatcttttcaacgtcacacagtttact
gacatctcttcgcaaattccggatgttgatgatcagttttccaatattactggagacttc
agctctgtccagatcttgacctctgacaccaaagataccctgattgacttcagggattcg
ccggctgataccattgactggaccattttcactaacgagctggacacaagcctgctctat
gatggtgacggcaacaatgatactctggtggaactcatcaacgctcttggtattgatgct
gatgcagcttcgggttcagataaaacagatttgaatgcaatcaaagatgatctccagact
cttcaagatgaaatcgtcgatgtcctcctcaatgatgcggttttgatagccagagagatt
gactcattaactgcatacacggacgatattgatgtaagtatatatagtactctttgcgcc
tgtaatccaagctgtggggaagttacaaattga
DBGET
integrated database retrieval system
