Lytechinus variegatus (green sea urchin): 121425034
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Entry
121425034 CDS
T11173
Name
(RefSeq) 3'-5' exoribonuclease 1-like
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121425034
03036 Chromosome and associated proteins [BR:
lvg03036
]
121425034
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121425034
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
121425034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Pox_D5
Motif
Other DBs
NCBI-GeneID:
121425034
NCBI-ProteinID:
XP_041476908
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All DBs
Position
12:15191581..15197753
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AA seq
415 aa
AA seq
DB search
MIVLDYVLILGSVIVVSCFIWISFAMNSSPSTAELQAPDKGHSPSRRNRRGRKLRQTPPA
SSAPQESQSTNVRHRRTRLADSNDTVEMHIDDPPLPEENMDIDDDDVECEYGVQNTMSKT
RIKEGREKKRRKENESLLVTKKDSSPVRLKDFSHPIYKEMSLRNGSVNRMTKIDLQNTLQ
ELGLNRLGSADVLKRRLKHHYSKESLKMAGLSTDVPVRFDYLCVIDVEATCLEINPVDYV
HEIIEFPIVLLNTKTLQIEDTFDAFCKPVVNPQLSKFCSQLTNISQKMVDKADTFPVVLE
KAERWMKQKGLGSKHSFAIATDCSLDMDLYLKLQCLVSEITYPQYAKEWVNISKVFANLY
KTKRLPLRAMLNSIGLAFIGQPHRGIDDARNIARIALQLIEDGAEMKYNEKLTAS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgatagttttggattatgtgctcattttagggagcgtcatagtcgtttcatgttttatt
tggatatccttcgccatgaattcatctccgtccacggcggaacttcaggcacctgacaag
ggccatagtcccagtcgcaggaatcgacgtggtcgaaaattaagacaaactcccccggcc
tcatcggcaccgcaagagagtcaaagtaccaacgtgaggcacagacgaactcgactcgct
gacagcaatgataccgtcgaaatgcacattgatgatcctcctcttccagaagaaaatatg
gatattgatgatgatgatgtggagtgtgaatatggtgtgcaaaacacaatgtcaaagact
cggattaaagaaggaagggagaagaagagacgaaaggaaaatgagtcattgttggtgaca
aaaaaggattcttctccagttcgactgaaagacttcagtcatcccatctacaaagagatg
tcgttaaggaacggaagtgttaacaggatgaccaagattgaccttcagaatactttgcaa
gaacttggcctgaacagattaggcagtgcagatgtcctgaagcgccgtctaaagcaccac
tattccaaggagtccctgaagatggcaggtctgtctactgatgtacctgtcaggtttgac
tacctgtgtgtgattgatgtagaagcaacgtgtctggagatcaaccctgtagactacgtt
catgagataattgaattccccattgttctgctcaacacaaagacgttacaaattgaagac
acatttgatgcattttgtaagcctgttgtcaaccctcagctctctaagttctgttcacaa
ctcacaaacatctcacagaaaatggttgacaaagctgatacatttcctgtcgttttggaa
aaagcagagcgatggatgaaacagaagggccttggaagtaaacactcctttgcaatagcc
acagactgctctttggacatggacctatacctgaagctgcagtgtctggtcagtgagatc
acctacccccagtatgccaaggaatgggtgaatatcagcaaggtctttgccaacctctac
aagaccaaacggttaccgctgagggccatgctgaacagtatcggactggccttcatagga
cagcctcatagagggatagacgatgccaggaacattgccaggattgcgttgcagctgatt
gaggatggtgcagagatgaagtacaatgaaaagttgacagcgtcgtag
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