Lytechinus variegatus (green sea urchin): 121425089
Help
Entry
121425089 CDS
T11173
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121425089
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121425089
Factors involved in mRNA localization
Other mRNA localization factors
121425089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
BP28CT
Motif
Other DBs
NCBI-GeneID:
121425089
NCBI-ProteinID:
XP_041477036
LinkDB
All DBs
Position
1:complement(10061434..10115214)
Genome browser
AA seq
1270 aa
AA seq
DB search
MSSHNVTVTLEDALSNVDLLEELPLPDQQPCIEATAVSLTYRANFDTNFEDRTAYVTGIA
KYIEEATVHSELLSAIVQYFQDAETHNDLNKLLEEGESYAVTLYTWRSCSRAMPQIKSNN
QPNRKQIYETFVDVLRPEVTKLVNFMYFQQRAIDVFCRDVKRLSHAEKRKDFVSEAYLLT
LGRLINMFAVLDALKNVKASIKNDYAAYRRAAQFLKVMADPQALRESQEVVLFLANNDKI
TRTLKENLEKIQGYEELLMDIVNLCVDLFEQRQYVMPAEKHMLLKVIGFGLYLIDSKENN
IYKLDQKKRINLNKVDKIFKQLEVVPLYGDIQIPVFTYIKKSANYESHKSFWNPDMSSAA
QYNLLEHLQPIRDSHMRYISELARHSNKEVTTAQKDTGRTEDENRVLYEIALRGLRLLSR
WTSLVTELFSWKLFHPAETRDIKAQEAEEYERATRYNYTSQEKFALIEVIAMIKGLQVLM
NRMESVFCEAILRTVYAEMQDFVQLTLREPLRVATKKKKTLVVSIIRAVRETCADWLRGV
EPNDPALKGEKDPKNGFSFDVPRRTVGPSSTQLYMMRTMLESLTADKGGTGRKTLRKELE
SIFTVEPLEKFHKRTFFFTCMLNFSETLQACCDLSQLWYREFFLEMTMGERIQFPIEMSM
PWILTDHILETKEPSMMEYILYPLDLYSDSAQYALTQFKKQFLYDEIEAEVNLCFDQLVY
KLSEQIFAYYKALAASILLDKRFRTECQNFGIHILYPPPNKYETILRQRHLQLLGRSIDL
NRLISQRIRTSLQRSLDLAIARFESSDFTSIVELDQLVEVNRLTHSLLSKFLTLSEFDSM
LREANHNVMAPYGRITLHVFWELYYDFIPNFCYNGSTERYVRTKLSFIDPPSRDKPPTAA
ASYLFGSKALNSAYSRVNSLYTTFVGIPHIRCMVKLLEYQGIAVIMEELLKIVKGLLQNT
ILQYTRVLIEVMPRKCKLPKYEYGTKGVVAYYSAHLQDIAQYPDLKVNLFRNFQEVGNTI
IFFRLIEQSLAVEEVCDLLHASPFQNIIPKPHVKAGEKLEVKLKRLEAGFAPLHVVPVIE
KLGSQEQLADTREGDLLTRERLCCGLSMFEVVLSRIRSFLDDPVWSGEEPINGVMNIDEC
TEFHRLWSAIQFVYCLPLKENNFTPEESYGEGLNWAGCTLITLLNQKRRFEALDFSYHIL
KINKVDNVNEDINGIPVGRLVDRIRKYQILNGQIFAVLGKYLKAGEGENPPVEQIRCYKP
PIHQSVMEGM
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccataatgtcaccgtgaccttggaggacgccctctccaacgtcgacctgctc
gaggagcttcctctacctgaccaacaaccttgcatcgaagcaacggccgtttccctgacg
tatcgcgcaaactttgataccaactttgaggacagaacagcttatgttactgggatagca
aagtacatagaagaggccactgttcattcggaattgctttcagcaattgtccaatatttt
caagatgctgaaacccacaatgatctgaataaattattggaagagggagagagctatgca
gtcacactgtacacatggagaagctgctcaagggcaatgccacagatcaaatcaaacaac
caacccaacaggaaacagatttatgagacgtttgttgatgttctacgaccagaggtcacc
aagctagtcaatttcatgtactttcagcaaagagcaattgatgttttctgcagagatgtg
aaacgtctatcccatgcggaaaagaggaaggactttgtgtcggaggcgtacctcctgacg
ctaggacgtctcatcaacatgtttgcagttctggatgctcttaagaatgtcaaagccagc
atcaagaatgactatgctgcctacaggagggcagcccagtttctgaaggtgatggctgat
cctcaggccctgagggaatcacaggaggtggtcctgttcctggccaacaacgacaagatc
accagaactctgaaggagaacctggagaagatccagggctatgaggaactcctgatggac
atcgtcaatctctgcgtggacctctttgaacaacgccagtatgtcatgccagctgaaaaa
cacatgcttctcaaggtaataggctttggtctatacctcattgatagcaaagagaacaac
atctacaagctggaccagaagaagaggattaatctaaacaaagtagacaagattttcaag
caattggaagtggtgcccctctatggtgatatccaaatccctgtgttcacctacataaag
aagagcgccaactacgagtcccacaagtccttttggaatcccgacatgtcgtcagctgca
cagtacaacctcctagagcacctgcaaccaatcagagacagccatatgagatatatcagt
gagcttgccagacatagcaacaaggaggttaccacagcacagaaagacacaggtcggact
gaggatgagaatcgtgtactgtatgagatagctctgcgtggactgaggttattgtcgcgg
tggacgtcccttgtcacagaactgttttcttggaaactgtttcatcctgctgagactagg
gacatcaaagctcaagaagccgaggagtatgagagggctacgaggtacaactacacgagc
caggagaagtttgcactgatcgaggtgatcgctatgatcaaaggccttcaggtcctgatg
aacaggatggaaagtgtgttctgtgaggccatcctcaggacggtgtatgcagagatgcaa
gactttgttcaactcactctacgagagccgctcagggtggcaactaagaagaagaagaca
cttgtagtcagtattatccgagccgttcgagagacctgtgctgattggcttagaggggta
gaacccaacgacccggccctgaaaggagagaaggatcccaagaatggattttcatttgat
gtgcccaggagaacagtcggtccatcaagtacacagctctacatgatgcgaaccatgctg
gagtctctgaccgctgacaagggaggcaccggcaggaagaccttacgcaaggagctagag
agcatcttcacggtggagcccctggagaagttccacaagaggacgttcttcttcacctgt
atgctcaatttctcagaaacactgcaagcatgctgtgatctctcccaactgtggtataga
gagttcttccttgaaatgacaatgggagaacgaattcagtttccaattgaaatgtcaatg
ccatggatcctgactgatcatatcttagagacaaaggaaccttcaatgatggagtacatc
ttatatccacttgatctgtacagtgacagtgctcagtatgcactcacgcaattcaagaag
cagtttctctacgatgaaatagaagcagaggtgaacctgtgctttgatcagctggtgtac
aaactcagtgagcaaatttttgcctactacaaggcccttgctgcaagtatattgctggac
aagagattcaggacagagtgtcagaactttggcattcacatactctatccacctccaaac
aagtacgagacaatactcagacagaggcatttacagctccttggtcgttctatagacctg
aaccgactgatctcacagcgaatccgaacctcactccaacgtagtcttgatcttgccata
gcccgctttgagagcagcgatttcacatccattgtggagcttgaccaacttgtagaggtc
aatcgcttgacccattcactcctgtccaagtttctgaccctttctgagtttgactccatg
ctgcgtgaggccaaccacaacgtgatggcaccctacggccgtatcacgcttcatgtcttc
tgggagctctattatgactttataccaaacttctgttacaatggatcaacagagaggtat
gtcaggacgaagctgtcgttcattgatccccctagcagagacaagccacccacggctgcg
gcatcctatctgtttggatccaaggctctgaacagtgcatacagcagggtgaacagtctc
tataccacattcgttggtatccctcatatacggtgcatggtgaagctcttagagtatcag
ggtattgccgtcatcatggaagaactcctcaagattgtcaagggtctgctccagaacaca
atcctccagtacaccagggtactcattgaagtgatgcccaggaaatgcaagctaccgaag
tacgaatacggaaccaaaggtgtggtagcatactactcagcgcatctccaggacatcgcc
cagtacccggacctcaaggtaaacctcttccggaatttccaggaggtcggaaacaccatc
atcttcttccgtctgattgagcagagtctggccgtagaggaggtctgtgaccttcttcat
gcctcccccttccagaacatcatcccaaagccgcatgtcaaagccggtgagaagctagag
gtaaaactgaagagattggaggctggatttgctcctctccacgttgttcctgttatagag
aaacttggatcacaagagcaacttgctgacacacgagagggagacctgctgacgcgtgaa
cgtctctgctgtgggttgagcatgttcgaggtggtgctgtctcggatccgtagcttcctt
gacgatcccgtctggtccggtgaggaacccatcaatggagtgatgaacatcgacgagtgc
accgagttccatcggctctggagcgctattcagtttgtctattgtctacctctcaaggag
aacaactttacaccagaggagagttacggagaaggtcttaactgggcaggctgtaccctg
atcactttgttgaatcagaagagacggtttgaagctcttgatttcagctaccatatcctc
aaaatcaataaggtggacaatgtgaatgaagacatcaatggcattcccgttggccgactt
gttgaccgtatccggaagtaccagatcctcaacggacagatctttgcagtccttggtaaa
tacctgaaggctggagaaggtgagaatcctccggtggagcagatccgatgctacaagcca
cccatccaccagtctgtcatggaaggcatgtaa
DBGET
integrated database retrieval system
