Lytechinus variegatus (green sea urchin): 121425239
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Entry
121425239 CDS
T11173
Name
(RefSeq) rab9 effector protein with kelch motifs-like
KO
K20285
Rab9 effector protein with kelch motifs
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121425239
Membrane trafficking [BR:
lvg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121425239
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
DUF1668
Motif
Other DBs
NCBI-GeneID:
121425239
NCBI-ProteinID:
XP_041477190
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Position
12:11581823..11590171
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AA seq
407 aa
AA seq
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MELHPILEKGEWLCKQNLWYVVSARGQHPSMRVGQCCCPIPSTQGGIGKLAVVGGATPSG
PFDETHLLDFDQYEWDELELTGFTARYEHASFVAPNDPGKILVFGGAQLDKNLNCVQTLD
LASKSWSTVTTKGTTPSPRTCRGSAVDGSKLYIFGGGQQGSEPVSDTMMHVYDAVTNEWT
QPPSSGKIPSARHGHVMAVCNGKIYLHGGMSGTSLYDDLYEYSIDTGVWKIVKSKGDIPS
GRAAHGCVSHGNKILIFGGMTTGGASDETYMFDTRKSRWLKLKPDGPPPAPRLDHAMCLV
TLPCPAQITQSTSSRQNGAEGTAASGSRAPSAGDPSSAAEEFLTSCVETAVEQMSGESPR
DGAQGGAGAASSAVSGEATLCCVVQGGMDTQGEIFDDCLLLRLDNLF
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcatccaatcttagagaagggtgagtggctgtgcaagcagaacttgtggtat
gtggtatcggctcgtgggcaacatcccagcatgagggttggccagtgttgctgtcccatc
ccttcaacacaaggtggtattgggaagcttgctgtggttggaggagctactcccagcggc
ccatttgatgagacccatcttcttgattttgatcagtatgaatgggatgagctagaacta
acaggtttcactgctcgctacgagcatgcatcttttgttgcccctaacgatcctggaaag
atccttgtctttggaggagcacagctggataagaaccttaactgtgtgcagactttggat
ttagcctccaagtcatggagcactgtaacaaccaaaggaaccacgccctcacctcggacc
tgcagaggaagtgctgttgatggcagcaaactttatatatttggcggaggtcagcaggga
tcagagccagtatctgacacaatgatgcatgtctatgatgcagtgactaatgagtggacg
caacccccatcgagtggtaaaataccgtcagctaggcatggtcatgtgatggcggtatgt
aatggcaagatttacctccatggtggtatgtcaggtacttctctctatgatgacctgtat
gagtatagtatagacacaggtgtgtggaaaattgtgaagagtaaaggagatatcccatca
ggccgtgctgctcatggatgcgtatcccatggcaacaagatccttatttttggtgggatg
acaaccggaggagctagtgatgaaacttatatgtttgacacaagaaaaagcaggtggctg
aaactcaaaccagatggaccaccaccagcgccacggctggaccacgccatgtgtctggtg
accctcccgtgcccagcacagataacccaatccacaagcagtagacagaatggagcggaa
ggtaccgcagcttcaggtagtagggcgccatctgctggtgatccatccagtgctgcagag
gagttcctgacttcttgtgtggagacggcagtagagcagatgtcaggggaatcaccaaga
gatggcgcccaaggtggagcaggagcagcatcaagcgcagtatccggtgaggctacgttg
tgttgtgtggtgcaaggaggaatggatactcaaggggagatctttgatgactgtctcctg
ttaagattggacaacctcttctga
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