Lytechinus variegatus (green sea urchin): 121425280
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Entry
121425280 CDS
T11173
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121425280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lvg04054
]
121425280
04090 CD molecules [BR:
lvg04090
]
121425280
Pattern recognition receptors [BR:
lvg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121425280
CD molecules [BR:
lvg04090
]
Proteins
121425280
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
TIR
TIR_2
Motif
Other DBs
NCBI-GeneID:
121425280
NCBI-ProteinID:
XP_041477239
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Position
12:complement(5919244..5922014)
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AA seq
891 aa
AA seq
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MTYKYSSRAFHSGILACYFLILHVSIISSRILSENVREDCYQDFELRKAYCNSKGLDSVP
QNLAKNIVDLDVSGNNITTLLNSSFERYPMITKLDLSANNLRVIERAAFHPLKNLRTLYA
LSNRNLVLSDTGLFRWASGLTFLDFSGSNLRFIPDDILKWSKHFDRVDLLYNELSFVNIS
SCGSVEYADFSSNNIENLTRECFTFTCQTDSLVLAGNPLKIIDSDAIAALKTRSLSFGRA
IDSHPFTPDMLTNLTIGISRSDVKELRIFDVGLKFTLKDAFSSLQGNPFPRLDLSLNRID
PLYSHVFSNLARLDKLILDHNDIVTIEPRLFKGMLALKVLSVHSNNIMYINPSNQTWRIN
LMELDLSANSLVKITQFAFHGLRNLTILDLSSNNHLSFIHLSTFTGLDNVKTINLAGCSI
THLQLYTPALNSLIMKRNIGYFPSSPLKPGESFKHTANLVHLDMKNSKIWSYNLWNPTTN
VSLFDGLFNLTILDISNNLGIGKSNGLIPDMFHHLSALRELGLDECGIYNLPSSLFSGLE
SLQKLNLSGNELKQVYAGSFLGLSQLRSVRLDGNVLADLHAGSFSDNPRLTRLSLANNKL
TGLNESTFRPIYSSLLQIDLSDNPIVCTCDIKWLLYWLNGRESFSLDNDESTLCGPQSLP
SLREKPFLHFKPDELCRFNYAIFSVIPVALVILVCLIVAFVLIHHKRWQLKYKLFLLKLA
VWGYRERIDARNHTEYEFDVNFIFCDNDEEWIRIYLRPTLEEQLPQFQRNIFGDADLIAG
MYYFDAVDYVVSRSFKTVVALSKAAVRDRWFMLKFRIAMDHVCDTQTEFVTVVFLEDIPD
DELPFLVRLYLGDGRPYLNWTGDVRGQEYFWHELEKNLTINLKTNDHIPNE
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgacctacaagtacagttcgcgagctttccattcaggtatattggcttgctatttcttg
attcttcacgtttccattatatcgtcaagaatattgtccgagaatgttcgtgaggattgc
taccaagactttgaactgagaaaagcatactgcaacagcaaaggtctcgactctgttcct
caaaatcttgccaaaaacatagttgatctcgacgtgagtggtaataacattacaaccctc
ttaaattcctcgtttgaaagatatcccatgataactaaattggacctttcagccaacaac
ctcagggtgattgaacgagcagcttttcatcctctgaagaatttaaggaccttgtatgcc
ctcagcaatcgcaatcttgtgctctcagatacgggtttatttagatgggcaagcggattg
acattccttgacttttcaggatcaaacttaagattcattccagacgacatcctcaaatgg
agtaaacactttgaccgcgtcgatttgctttacaacgaacttagtttcgtgaacatcagc
tcttgtggatctgttgaatacgcagatttttcttcgaataacattgaaaacttgacaaga
gaatgtttcacctttacttgtcaaactgattcattggtccttgctggaaaccccttaaag
attattgattccgatgctatagcagcgctaaagacccgctcactgagtttcggacgggcc
atcgatagccatcctttcacccctgatatgttgacaaatctaacaatcggaatctcccgt
tcagatgtaaaagaacttcgtatctttgatgttggcttgaaatttaccctaaaagatgcc
ttctcctcgttgcaaggtaaccctttccctcgccttgatttatccctcaatagaatagat
ccactctactcacatgtcttctcaaatctagctcgacttgataaacttatcctcgatcat
aatgacatagtgacgatagaaccacgtttgtttaaaggtatgcttgcactgaaagtgctc
agtgtccattctaataacataatgtacataaatccaagtaatcagacatggagaatcaac
ctgatggagttagatttgtccgcgaactcattggtaaaaattacccaatttgcgtttcat
ggattgcgaaatttgacaatattggacctgagctcaaacaaccatcttagttttattcat
ttatcaacatttacaggactagataacgttaaaactatcaatttggcaggatgtagtatt
acacatttgcagctttatactccagcattaaattcgctgattatgaaaagaaatatcggt
tatttcccttcgagtcctttaaaacctggagaatctttcaaacacacagcgaatcttgtc
cacttggacatgaaaaactctaagatttggtcctataatctttggaatccaaccactaat
gtttctctcttcgatggattgtttaatctcaccatactggatattagcaacaaccttggt
attggcaaatcaaatggtctgataccggacatgttccaccatctatctgctttgcgggaa
ctcggtttagacgaatgcggcatttataatctcccatcttctttgttctctgggttagaa
tcacttcagaagctaaacctatctggtaatgagcttaagcaggtttatgcaggttcattc
ctcggtttgagtcagttgcgaagcgttcgtcttgatggaaatgtgcttgcggacctccat
gcaggatcgttctctgacaatccgagacttacaaggctgtcattagccaacaataaacta
acaggtcttaacgagagcacatttagaccaatctattcctctcttttacaaatagatctt
tccgataatccaattgtgtgtacatgtgatatcaaatggttgctatactggctcaatggt
agagaaagttttagccttgataacgatgaaagtactctgtgtgggccacaatcgttgcct
tcactccgtgagaaacctttccttcatttcaagcccgatgaactatgtcgattcaactat
gccattttcagtgtcattcctgtcgctttggtcatacttgtctgcttaattgtcgccttt
gtcctcatccatcacaagcggtggcaactgaagtataaactctttcttcttaaactggcg
gtttggggctacagggagagaatagatgctcgcaaccataccgaatatgagttcgacgtc
aatttcatattctgtgacaacgacgaggaatggattcgcatctatctgagaccgaccttg
gaagaacaacttccacagtttcaaaggaacatctttggtgacgcagacctcatagcaggt
atgtactattttgatgcagttgactacgtagtgagccggagtttcaagaccgtcgtagca
ctcagcaaagccgctgttcgtgaccgctggtttatgctcaagttccgcatagccatggat
cacgtttgcgatacccagaccgaattcgtaaccgtcgttttccttgaagatatcccagat
gatgagctacctttcttagtgaggttgtaccttggtgacggtagaccttacctcaactgg
acaggggatgtcagaggacaagagtatttctggcatgaattggaaaagaatcttaccatc
aatctaaagaccaatgaccatattccaaatgaataa
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