Lytechinus variegatus (green sea urchin): 121425294
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Entry
121425294 CDS
T11173
Name
(RefSeq) heparanase-like
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00531
Glycosaminoglycan degradation
lvg01100
Metabolic pathways
Module
lvg_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
121425294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lvg00536
]
121425294
Enzymes [BR:
lvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
121425294
Glycosaminoglycan binding proteins [BR:
lvg00536
]
Heparan sulfate / Heparin
Enzymes
121425294
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Glyco_hydro_cc
Motif
Other DBs
NCBI-GeneID:
121425294
NCBI-ProteinID:
XP_041477254
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All DBs
Position
12:9373423..9390555
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AA seq
567 aa
AA seq
DB search
MAINKGDAMMVVGRITMATISLVLVAIMMAATKMSFVEHRTEPGKRHLSTPDVTKYSAHS
VVVLSLLSVNTTNIVTTVDERFLSIGATMGFIRTHLGQHFNSTRYWTLARGLSPAIYRLG
GAEADFTVFKENADPVNCTLKPTFQSKGPSENYGKLGFFNLTFCAHTWDNINEFARSVGW
DILFTFNGLERNATSWDPTDAIHLLNYTKQRGYNVIWSLGNEPNGYLRKDNVSVNGTQMA
EAFHTLRKSVSRVSGLSDIFLVGPDVSAPTKKIPAPPTPISKYLIDFLQAIGNTTNVTSF
HFYYTDGRTAGFRDLTNPLLSDLLQVNIQSVQSLVHKYGSKANSKIWLTESGLCFGSMPT
ILNNAYADGMLYLDRLGMAARLGIDLIVSQGLMGKYGGIFGENIYPHLFYWLLLCHKRLM
GTRVLDVSKVVSTKVESRQQENASKILDDDVSKYIRVYAHCTKTSALYQPGSITLLIINM
IPYDDVQIKLEGALLNSTIHEYLLLPVGTKGILSPRLQLNGHLLKMEEDLTLPSLSPRKQ
PPGSLIMLPHRSYGFYVLPDAEAQACQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcaacaagggagatgcgatgatggttgttgggcgtataaccatggcaaccatt
tcgctggtattggtggcgatcatgatggcggcaaccaaaatgagcttcgtagaacatagg
acagagcctggaaaacgacatttatccactcctgatgttactaaatacagcgcccacagc
gttgtggtgttatcattattatcagtgaatacaaccaatatagtaacaacagtggacgag
cgattcctatcgatcggggccactatgggtttcatcagaacccatctgggccaacatttc
aattccacccgatattggacccttgctcgtggtttatcgcccgccatctatcgcctggga
ggtgcagaggccgattttaccgtctttaaagagaacgcagatcctgtaaattgtactctc
aaaccgactttccagagcaaaggaccctccgaaaattacgggaagttaggatttttcaac
ttgacattttgtgcgcatacttgggacaacatcaacgagtttgcccgatctgtcggctgg
gatatactgtttaccttcaacggtctagaacgtaacgcgacttcatgggatccaacggat
gccatccatcttctcaactataccaaacagaggggatataatgttatatggtcactgggg
aatgaaccgaacggatatctcaggaaagacaatgtgtcggtgaatggcacacagatggct
gaggcattccatacactccgaaaatccgtatccagagtatccggactgtcggatatattt
cttgtcggtcctgatgtctctgctcctacgaagaaaataccagcgcctcccactccaatt
tcaaaatatctcattgattttctccaagccatcggtaataccaccaatgtgacatctttc
cacttctactacaccgacggacgaacggccgggttcagagatttgaccaaccccctgctc
tccgacctgttgcaagtaaacattcagagtgtgcaaagcttggtccacaagtatggctcg
aaagcaaactcgaagatatggctaacagaatctggtctttgtttcggatcgatgccaaca
atcctgaacaacgcctacgcggatggaatgctgtacctggataggttaggaatggcagct
cgtcttggaatagatttgatcgtcagtcaaggactgatgggtaaatatggcgggatattt
ggtgaaaatatatatccccatttgttttactggctcttgctgtgtcacaagaggctcatg
ggaacccgggtcctagacgtttcgaaagtcgtttccaccaaagttgaaagtcggcaacaa
gaaaatgcatcgaaaatattggatgatgatgtatcaaaatacatccgcgtatacgctcat
tgcacgaaaacaagtgcattgtatcagccaggatctattaccctgctgatcatcaatatg
ataccatacgatgacgttcaaatcaaacttgagggcgctctactgaattctacaatacac
gagtatctgttattgccagtaggcacgaaagggattctttcaccgcgattgcaactcaac
ggacaccttctcaagatggaagaagaccttactctccccagcctttcaccccgtaagcag
ccgcctgggagcctaatcatgctccctcatcggtcatacggcttttatgtgctcccagat
gcggaggcccaagcttgccaatga
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