Lytechinus variegatus (green sea urchin): 121425320
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Entry
121425320 CDS
T11173
Name
(RefSeq) thyroid hormone receptor beta-A-like
KO
K08362
thyroid hormone receptor beta
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04080
Neuroactive ligand-receptor interaction
lvg04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121425320
04081 Hormone signaling
121425320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121425320
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lvg03310
]
121425320
Transcription factors [BR:
lvg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121425320
Nuclear receptors [BR:
lvg03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
121425320
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121425320
NCBI-ProteinID:
XP_041477287
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Position
1:82847534..82891986
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AA seq
390 aa
AA seq
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MSKFKFGESIHSGIGEGQPDGQEKSTKSPYIPSYMDLSNGPEPCVVCGDAATGYHYRCMT
CEGCKGFFRRTIQKKLSYYCKWNEECIIDKTTRNQCQQCRYKKCLTVGMAPDLVLNENQR
KAKRALIQENREKRSREEMLRQTGLISSNQLTNHEESLIRAILVAHKQTSHMYRRESSSG
DESEPDSKKLKMEDEKPLAEIMTPSIVKVVEFAKRIPGFTNLHHDDQILLLKTCCMEIMC
LRIAQKFDPDSQKLILSNGLRVGKSDMDHGVLSELIEPIFDFAVSMSRLQLTETENALLA
AVLLIAGDRPGLKEAKLVETLQDSLLTAFQHFINESRPKTPVHWAKILMKITDLRTISAR
HAERIMCIKLDRPNEIPQIFLEMFDDNGLV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtttaagttcggagagagcatacatagcggtataggtgaaggacagccagat
ggtcaagaaaagagtactaaatcaccatacataccaagctacatggatcttagcaatggc
ccagagccatgtgtcgtatgtggagatgctgctacaggatatcattacaggtgtatgacc
tgtgaaggatgtaagggattctttcgaaggacgattcagaagaagttgagttattactgt
aaatggaatgaagaatgtatcatagacaaaacaaccagaaaccaatgtcagcaatgtcgt
tataagaagtgtctcactgttggcatggcaccggatttggtattgaacgagaatcagcgc
aaggcaaagagggcgctgatacaggagaatcgtgagaagcgtagcagagaagagatgctg
agacagaccggtctaatctctagtaaccagctgacaaatcatgaagagtcgttgattaga
gctattctggtagctcataaacaaaccagtcatatgtacaggagggaatcgagttcaggg
gatgagagtgagcctgatagcaagaaactgaagatggaggatgaaaaacccttagctgag
atcatgacgccctctatagtcaaagtagtggaatttgccaagagaataccaggatttaca
aatcttcatcatgatgatcaaattttacttctgaagacctgctgcatggagatcatgtgc
ttgagaatagctcagaagttcgacccggacagtcagaagttaatcctctccaacggtctt
cgggtcggcaaatcggacatggatcatggtgtcctcagtgagctaattgaacccatcttt
gactttgctgtcagtatgtctagattacaactcacagaaacagagaatgctctcttagct
gcagtgttgctgatagcgggagaccgaccaggtttgaaggaggctaagcttgttgagaca
ttacaagacagtctgttaacagccttccagcatttcatcaatgaatctaggccaaagaca
cctgtgcactgggccaagatactcatgaagatcaccgacttgaggaccatcagtgccagg
catgctgaacgcatcatgtgcatcaagttggaccgacctaatgaaatacctcagatattc
ttggagatgtttgatgataacggtctggtctga
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