Lytechinus variegatus (green sea urchin): 121425523
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Entry
121425523 CDS
T11173
Name
(RefSeq) syntaxin-18-like
KO
K08492
syntaxin 18
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04130
SNARE interactions in vesicular transport
lvg04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121425523
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121425523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121425523
Membrane trafficking [BR:
lvg04131
]
SNARE
Syntaxin (Qa)
Stx-rER
121425523
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
HTH_Cic_C
Phage_TAC_3
Motif
Other DBs
NCBI-GeneID:
121425523
NCBI-ProteinID:
XP_041477534
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All DBs
Position
12:complement(17468710..17502702)
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AA seq
314 aa
AA seq
DB search
MAADRTSLFKASIKTVRTRNKALGVTKDTSKSSLLSHAKPMKDDFALKAKEVVITISKLK
DFLLEHRKQYINAASHLVNDGCHMSDAERDQIDSDAQDFMRTCTDTIRLLKAEAHRQNVP
SQVRQHREAVFELIDDYLKGVCKLYSEQRAIRVKRVVDKKRISRLRQEGPSARLNQPVSN
KEEEKLKKNPAFDLNLTSPEDEEDDDLSPDEIRMFQQENERLFNDMNCLVDEVRQIEGKV
VEIAQLQEIFTDKVLQQSADIDRIGDTVVHTTENITAANQDIREAIKNNAGMRLWILFFL
VVCSFSLLFLDWYS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagacagaacttcactcttcaaagcatcaattaaaacagttcggacaagaaat
aaagctcttggagttaccaaagatacttctaagtcatccctcttgagtcatgcaaaaccc
atgaaagatgattttgctttaaaggcaaaagaagtggttatcacaatctccaagctgaaa
gattttttgcttgaacacaggaagcaatatatcaatgctgcaagtcatcttgtgaatgat
ggctgtcacatgtcagatgctgagagagatcagatagactcagacgcccaggattttatg
cgaacatgtacagatacgataaggttgctcaaggcagaagctcatcgtcagaatgtccct
tcccaagtgagacaacatagagaagcagtgtttgaactcatcgatgattacctgaaaggt
gtatgtaagctgtatagcgaacagagggcaattagagtgaagcgtgttgttgacaagaaa
cgcatatcaagactgagacaggaaggaccctcagctcggttgaatcaacctgtttctaac
aaggaagaagagaagttaaaaaaaaacccagcatttgacctgaatctaacaagtccagaa
gatgaagaagatgatgacctatcaccagatgagataagaatgtttcaacaagaaaatgag
aggttattcaatgatatgaactgcctcgtggatgaagtaagacaaattgagggcaaagtc
gttgagattgcacaactccaggagattttcactgataaagtcctccaacagagtgcagac
attgacaggattggggacacggtggtgcacacaacagaaaacatcacagcagctaatcaa
gatataagagaagcaatcaagaataatgctggcatgagattatggatcctcttcttcctg
gtcgtctgctctttctctctcctcttccttgactggtatagctag
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