Lytechinus variegatus (green sea urchin): 121425588
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Entry
121425588 CDS
T11173
Name
(RefSeq) acid-sensing ion channel 1C-like isoform X1
KO
K04828
acid-sensing ion channel 2
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121425588
Ion channels [BR:
lvg04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
121425588
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Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
121425588
NCBI-ProteinID:
XP_041477665
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Position
1:10158058..10182827
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AA seq
507 aa
AA seq
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MSASRRGDEKKSGFNMPRSLIKVAPVVETDTLPEKKDIQTVSGGLQAPSSKAPPPVFPDD
IPLHMRYRDKVSWWAILYRSVPDAIGIGGMKYAFNPAEVKWRRFSWLLLVMGAFGALTYQ
VVDRAQHFASHPKSVDVSINYTAPITFPSVAICNYNTFRASLLSGTELGDFLTTAATDPS
SLDMNNYYDILTSTNMSYLMKNYAHELNLSVLFANFGGSDIDREANFSIALTEWGPCFIF
NDANNGYPPATVERAGKAYGLELMLDVQQWEYFFGPFNRISAGFQILLYDYGSVPMVEDH
GFGISPGTHAHVGIEVTDVNNLEPPFGSCEDKELKYFDHYGYAECDHECKGDFYIEKCGC
VPWAAPENDSLVECNNWELYTCVFPNSALFVTNHTCDCPVPCSFRTYKPTVSTTQFPSTF
WTNVYSAIYGFPAEVFPENICYLSIYFQEMSIQQINQQVDYTFFSLLCDIGGSLGLWLGG
SVLTVFEFCDLFSNSIYVYTKRVPNKF
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcatcacggcggggtgacgaaaagaagtcgggcttcaacatgcccaggagcctg
atcaaggtggctccagtggtggagacggataccctcccggagaagaaggacatccagact
gtgagtggggggctccaggctccttccagtaaggctcctcctccagtattcccggatgat
atcccgctccatatgcggtacagggacaaggtgtcctggtgggccatcctgtaccggtct
gttcctgatgcgatcggaatcggagggatgaagtatgccttcaacccggcggaggtcaag
tggagaagattctcttggcttttgcttgtgatgggtgcatttggtgctctgacctaccaa
gtcgttgacagggcacagcattttgccagtcatcctaagagcgtggacgtgtccatcaac
tacacagcaccaatcacttttccttcagtcgcaatatgtaactataacacattcagagct
tctctgttgtcaggaactgagcttggtgatttcctgaccaccgctgctactgatccttct
tctctcgacatgaataattattacgatatactgacctccactaatatgagctatctgatg
aaaaactacgcccatgaactgaatctgtccgtcttatttgcaaactttggtgggtcagat
attgacagagaggcaaacttctcgatagccctgaccgaatggggaccttgttttattttc
aacgatgctaataatggttacccacctgcaactgtggaacgtgcaggtaaagcgtacggg
ttggaattaatgcttgatgtccaacagtgggagtacttcttcggaccgttcaatcgtatc
tcggcaggattccagatccttctttacgactacggttccgtgcccatggtcgaagatcac
ggcttcggtatctcacccggaacccatgcccatgtcggaatcgaagttaccgatgtaaat
aatctggaacccccctttggttcgtgcgaagataaagaattaaaatactttgatcactac
ggctatgcggagtgcgaccatgaatgcaaaggcgacttctatattgaaaaatgcggatgc
gtgccctgggctgccccagaaaacgattctttagtggagtgcaacaactgggaactgtat
acttgtgtttttccaaattccgcgctgtttgtaaccaaccatacttgcgattgtccagtg
ccttgtagttttcggacctacaagcctacagtctcgacgacacagttcccgtcgacgttc
tggactaatgtctattctgcgatatatggtttccctgcagaggtttttccagaaaacatc
tgttatctatcgatatactttcaagagatgagtattcaacagataaatcaacaggttgat
tacacgttcttcagtttactttgtgacattggcggctctctgggactctggctcggcggc
agcgtactcactgtatttgaattttgcgatctttttagtaattcaatttatgtctacacg
aaacgagtgccaaataaattttga
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