Lytechinus variegatus (green sea urchin): 121425612
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Entry
121425612 CDS
T11173
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121425612
Enzymes [BR:
lvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121425612
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121425612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-RING_4
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
Prok-RING_4
Fibrillarin
Rtf2
TRAF3_RING
zf-RING_11
zf-RING_10
FYVE
zf-ANAPC11
zf-UDP
Zn_ribbon_6
zf-RING_6
IBR_1
Motif
Other DBs
NCBI-GeneID:
121425612
NCBI-ProteinID:
XP_041477666
LinkDB
All DBs
Position
12:complement(20873655..20899918)
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AA seq
269 aa
AA seq
DB search
MLFLHLISMGNSAGTESEETQNKNMDRTQALSRKRRHSSRQGASTSHDEDEQPPRSRLRT
SRLSGRTSSSSVEIVDIPPQAVTPPIHEEEPIDLSLCIVDLTDETETTRNRPLRNSSQDD
IVDLTVETHAVDRAPRRMRRTRRGRLMRNSQRGNIIPILSDDSDEENDVMVLPEIDLGET
YRTARDETSNSTATGPGRGRQTSPKKRVITCPICMEDETTLRNNGHQLMSTNCGHVFCSQ
CIRASIQSQHKCPTCRKKLTLKQIHPIFL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgttatttctgcacttaatttcaatgggaaattcagctggcacggaatccgaggaaact
caaaataaaaatatggataggactcaagccctttcaagaaaacggagacactcctctcgt
cagggtgcaagcactagccatgatgaagatgaacagccccctcgctcaagattacggaca
tcaaggttaagtggtagaacaagctctagctcagttgagatagtggacataccgccgcag
gctgtcacaccaccaatccatgaagaagaacccattgatttgtcattatgtattgtggac
ttaacagatgagacagaaaccacaagaaatcgtcctctcagaaattcatctcaggatgat
attgttgatctcacggttgaaacacatgcagtcgacagagcgccaaggagaatgaggcgg
actaggagagggagactgatgagaaactctcaacgtggtaacatcattcctatcctcagc
gatgacagcgatgaggagaacgatgtcatggttctaccagagatcgacctgggggagaca
tacagaacagccagggatgagacgtcaaacagtacagccacaggtcccgggagagggcga
caaacatcaccaaagaaaagagttataacatgtccaatctgtatggaagatgaaacaaca
ttacgaaacaatggccaccagctgatgtcaacgaactgcggtcatgtattctgtagccaa
tgtatccgtgcgagcatccaatcgcagcacaaatgtccaacgtgtcgtaagaaactcact
ctgaaacaaatacatcccatatttctatga
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integrated database retrieval system
