Lytechinus variegatus (green sea urchin): 121425726
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Entry
121425726 CDS
T11173
Name
(RefSeq) heparanase-like
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00531
Glycosaminoglycan degradation
lvg01100
Metabolic pathways
Module
lvg_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
121425726
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lvg00536
]
121425726
Enzymes [BR:
lvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
121425726
Glycosaminoglycan binding proteins [BR:
lvg00536
]
Heparan sulfate / Heparin
Enzymes
121425726
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GFIT
Motif
Pfam:
Glyco_hydro_79n
CCDC84
PhyR_sigma-like
Motif
Other DBs
NCBI-GeneID:
121425726
NCBI-ProteinID:
XP_041477828
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All DBs
Position
12:9428847..9456160
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AA seq
591 aa
AA seq
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MYLLSRSMDKLSIEPLARTKVNMMVAPMAKVRVIIYLTVGILCGFVKSAYVPEGAITNDY
VHHDPVIYRPIKKGATNIGKGEGLPINSNSTSYFLVSIDTNKAIHAVDRRFLSVGLSAKT
VAVRSLNASTGYNPNSVILQTLFRGLAPSILRVGGRSGDEVIFALNGSSNSIPHPWININ
HFLTGEHWKSLHKFCLKSGADLAFTLNVALRKGDAWDPTNAKALLDFNANLGYRVIWELG
NEPALFKKNYHLRISARQLAKDFNTLRDILSEDRYRFSNELVGPDMDHLPITHCGNAKTA
TSEDFPTHTDYLRRFLNDAGDAINATTVHFYNLNSRSETISVDNFTNPDTVNLMRCELRE
FRKLMKDAKPTGARWLGETSTVAAGGFSGISNRYVAGFIILHNLGVAAEMGISVFIYWDL
INGPYSLLSSDDYTPTPLYWLCFLHKRLTGTHVLSVSYTEDEKVTQTVKSASYVHVFAHC
TRVSPLYPAGAVTIIAINLHNDTDASLSLTGSLMNKNIDKYLLTAPEGNLTSSNILLNGY
KLEMKNSTHFPDINPRPLPIGYPIVLPPRTYGFYVIKDADASVCRKHETKY
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtacctactaagtaggtccatggataaactctccattgaaccccttgctcgtacaaag
gtgaacatgatggtggcaccgatggcgaaggtccgtgttatcatctacctcacggtggga
atcttgtgcggtttcgtgaagtctgcttacgtcccagaaggagcgattaccaatgactat
gtccaccatgatcctgtcatttataggcccataaagaaaggagcaaccaatattggaaaa
ggggaaggtttaccaatcaattcaaactccacgtcatactttcttgtatctatcgatact
aataaagcgatacacgctgttgatcgtcgatttctttctgttggtctcagcgcgaaaaca
gtggctgtgagaagcctgaatgcatcaacgggatacaatccaaactcggtcatcctccaa
acgttgtttcgtggccttgctccttctattttacgtgtcggaggaaggtcgggagatgag
gtaatatttgctctgaatggttcttccaattctattcctcatccctggataaatataaat
cattttctcacaggtgaacattggaagagtcttcataaattttgcttaaaaagtggggcg
gatcttgcatttactttgaacgtggctttgaggaaaggcgatgcatgggacccgaccaac
gctaaggcactcctagacttcaatgcgaaccttggatatcgtgtcatctgggaattgggg
aacgaaccggccctgttcaagaaaaactaccacctcaggatatcagctcgtcagttagcc
aaggacttcaacacgctaagggatatcttatcagaggaccggtaccggtttagcaacgag
ttagttggaccggatatggaccaccttcccatcacacattgcggcaatgcaaagacagcc
acatcagaagactttccaacccatacagactatttgagaaggttcttaaatgatgctgga
gatgccatcaatgcaactacagttcacttctacaacctaaacagcagatcagaaacaata
tccgtcgacaatttcaccaacccagacacggtcaatttgatgagatgcgagctcagggaa
ttccgaaaactcatgaaagatgccaaaccgacaggcgcgagatggttaggcgagacctcc
accgtggctgccggtggcttcagtggaatatcaaaccgatatgtagctggatttattata
cttcacaacttgggagttgcggccgagatgggaatatctgtattcatctactgggacctg
atcaatggaccttattcattgctctcgtctgatgattatacaccgacaccgctgtattgg
ctatgttttctgcataagcggcttactggtactcatgttttatctgtatcgtacaccgag
gacgaaaaggttacacagaccgtaaaaagtgcctcttacgtccacgtttttgcccattgt
accagagtatctccgctgtatcctgccggtgctgttacgatcatagcaattaacctgcat
aacgatactgatgcatctttatcattaactgggagtttgatgaataagaatatagacaag
tatctcttgactgcaccagaaggaaaccttaccagcagtaatatacttctcaacggctac
aagttggaaatgaagaattcaacccattttccagatattaacccacgccctctgccgata
ggatatccgatagttcttcctccacggacgtatgggttctacgtcattaaagacgctgat
gcctcagtatgtcggaaacatgagaccaaatactaa
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