Lytechinus variegatus (green sea urchin): 121425882
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Entry
121425882 CDS
T11173
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121425882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121425882
03110 Chaperones and folding catalysts [BR:
lvg03110
]
121425882
03029 Mitochondrial biogenesis [BR:
lvg03029
]
121425882
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvg04147
]
121425882
Enzymes [BR:
lvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
121425882
Messenger RNA biogenesis [BR:
lvg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
121425882
Chaperones and folding catalysts [BR:
lvg03110
]
Heat shock proteins
HSP60 / Chaperonin
121425882
Mitochondrial biogenesis [BR:
lvg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
121425882
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121425882
Exosomal proteins of other body fluids (saliva and urine)
121425882
Exosomal proteins of breast cancer cells
121425882
Exosomal proteins of colorectal cancer cells
121425882
Exosomal proteins of bladder cancer cells
121425882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Mito_carr
SH3BP4_C
Motif
Other DBs
NCBI-GeneID:
121425882
NCBI-ProteinID:
XP_041477904
LinkDB
All DBs
Position
13:complement(26195728..26211704)
Genome browser
AA seq
583 aa
AA seq
DB search
MYRLSSVLRPLTSRALTPSVNRVVCPHLARSYAKDIKFGAEARGMMLQGVDLLADAVAVT
MGPKGRNVIIEQSWGGPKITKDGVTVAKAIELKDRWQNIGAKLVQDVANNTNEEAGDGTT
TATVLARAIAKEGFDNISRGANPTEIRKGIMNAVDVVVKELQRQSKPVTTPEEIAQVATI
SANGDAGIGELISRAMKKVGRHGVITVKDGKTLNDELEVIEGLKFDRGYISPYFINSAKG
QKVEFQDALLLLCEKKISTIQAIVPALELANAQRKPLVIIAEDIDGEALSTLVLNRLKVG
LQVAAVKAPGFGDNRKNQLHDMAISTGGIVFGDEAMDVKIEDVQVQDLGQVGEIAITKDD
TLILKGKGRQEDIDRRVAEIAEQIENTNSEYEKEKLNERLAKLSDGVAVLKVGGSSDVEV
NEKKDRVNDALNATRAAVEEGIVLGGGTALIRCLPSLENIPAENADQKIGVEIVRRALRI
PTQTIANNAGVEGALIVEKVIDASEGIGYNAMEGEFVDMVQAGIIDPTKVVRTALLDASG
VASLLTTAETVITEIPKEKEEMPGGGMGGMGGMGGMGGMGGMM
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtacagactatccagcgtcctccgacccctgacctccagggccctgaccccatcagta
aacagagttgtgtgcccacatcttgccaggagctatgccaaggatatcaagtttggtgca
gaggccaggggtatgatgcttcagggcgtggacctccttgcagatgctgtagcagtcaca
atgggccccaaaggacgtaatgtaattatagagcaaagctggggtggtcctaaaatcaca
aaagacggtgtcacagtcgccaaagccattgaactcaaagacagatggcagaacattggc
gctaaacttgtccaggacgttgcaaataacacgaacgaggaagccggggatggaaccacg
acggcaacagtgttggcgcgagccatcgccaaggagggttttgataacatcagcagggga
gccaaccctacagaaatcaggaagggcattatgaacgctgttgatgttgtggttaaggag
ttacagagacagtccaaaccagtcacaacaccagaagaaattgcacaggttgctaccatc
tcggctaacggagatgcaggcatcggtgaactcatctcaagggcaatgaagaaggtcgga
cggcatggtgttatcactgtcaaggatggcaagacgttgaatgatgagctcgaggtcatt
gagggtctcaagtttgacagaggatacatctcgccgtatttcatcaactcggctaaaggt
caaaaggttgaattccaagatgctctcctgttgctatgtgagaagaagatctcaaccatc
caagccatcgtcccagccttggagcttgccaacgctcagaggaaacccctcgtcatcatc
gctgaggacatcgatggggaagctctaagcacgttggttcttaataggttaaaggttggt
cttcaggtagcagcagtcaaggctccagggtttggtgataacaggaagaaccagcttcat
gatatggccatctctacaggaggaattgtatttggtgatgaagctatggacgttaagatt
gaagatgttcaggtccaggatctaggtcaggtcggtgagattgccatcaccaaggacgat
acactcattctcaagggtaagggcaggcaagaggatattgataggagagtggctgaaatc
gctgaacagattgagaacacaaactcagagtatgagaaggagaagctgaatgaacggctt
gccaagctttccgatggtgtagcagtactaaaggttggtggttcaagtgatgttgaagta
aacgagaagaaggatcgtgtgaacgatgccctgaatgccaccagggctgccgttgaggaa
ggtatcgtgcttggtggtggtacagccctcatcaggtgtctgccatcattagaaaacatc
cctgccgaaaatgctgatcagaagatcggtgttgagattgtaaggagagcgcttcgcatc
ccaacccagaccatcgccaacaacgccggtgtagagggcgccctcattgttgagaaggtg
atagatgcgtcagaagggattggttataatgcaatggaaggagagtttgttgacatggtc
caggctggtattattgatcccacaaaggttgtaaggacagcactcctggatgcatcgggt
gtggcctccctcctgacgacagccgagaccgtcatcaccgagattcctaaagagaaggaa
gagatgcccggcggtggtatgggaggcatgggcggtatgggaggtatgggtggtatgggg
ggcatgatgtga
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