Lytechinus variegatus (green sea urchin): 121425919
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Entry
121425919 CDS
T11173
Name
(RefSeq) breast cancer type 1 susceptibility protein-like
Organism
lvg Lytechinus variegatus (green sea urchin)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_2
zf-RING_UBOX
BRCT_2
zf-C3HC4_3
zf-RING_5
zf-RING_6
zf-RING_10
zf-Nse
RTT107_BRCT_5
TRAF3_RING
zf-RING_4
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
121425919
NCBI-ProteinID:
XP_041477960
LinkDB
All DBs
Position
13:34627562..34652306
Genome browser
AA seq
2551 aa
AA seq
DB search
MDVVRLKKITDSIGLMQKNLECSICLDLLQDPVSTKCDHQFCNFCVLALLQSSRKPSARC
PLCKVIITKRSLTKNEQLDKIVKAVRSVITAVEEDSGLQCSPPRGPVFISQPDPKPREPT
PKKKAKGKGQVRSSNVRKTKRKAAETVSVYRDHDSDSSDSDAFELPLVGHTNISSSFPRL
KTGGKKDSKDEDLENEEMEKEAEDFLTSLNAAPLSSHGDIVSGHSNELERINNEINLLPI
NSGHHKENKNPDLDSLPHIPQDPTPTDSEIFSVPAPKGPSKVNNLKAGDQDPYEFIPSQR
TPRKVKRKAGRKKNQNGKKEFPILKGRFLKPKRDNKSASSCSESDQENSMTQSKAADKLA
ASVTPFQESNSTAHSKGQITHPLCSNHDDGGKKVSPSNHPKDAGIVTTLVEEGDLVDIAN
VVIEDTVSGLDNEGGVDLNEDGNAQEEDKAQPVTSNLGKHPLPITPVVVIRARNVGGNIQ
GSQQSSEGGGITDSQPVVINRNHGRRVFATTYGKAKNGVDKSPPLDPQERILDWLVSKNA
GSDESDDNDDDADVGDAEKRETVEKTEDLQGTGNDQEIDDVIVGILPLEEAPESTPKEVI
IVDQLEPAEESKSPKTIITSPKKVQGEVRNGRRRSGRHNKETRIENITLDHEENEKGIND
KDSTLNRSSEDVEKESLPSRRTMKQRMKENLKEQTEAAKKESDAAKKESEAAAIKSDWEL
ALELARQFGTEPEHLKAEPTELGGRSSRRRKGKLTIEKVPESRSVRKTGRHAQENQEKGK
RESTESLDIDSFETQTLNNVAVKTTVKEKSRAASEKRKANSDKMKASPGSQTNILSGKVL
QNFTPVNNILKIPETPCISDPPKGENSLERELPSKPDFFEQPKTKAPRPRKSKESKSSSN
QKGESIPESKLTSQLTPPLRRSKRGSLPETLNSFHVPGQVLSLPAEKKEVEGMGEEKSNG
RTRESRKILSGASDLGIAAESSVSVIKGTESESREKVIDVAEPPMSSLPLYTEDIPKEDK
GSVCNSQRCKGSDTTESIDLEIDSDVYEDPDEALESELPESSGLEKNDVCSSVKQKSLDD
EMSIMDCILPSLSSQPHPSVGISPGPCENSSGTASDLGQAEADVSLHKKAEEVITVLSGS
SCSVQQMSQASVTVISQAKASGSFPMSLDVNSQPSESLLQPLRKSKRKVSQDGHQGSKLQ
TSENDVTKNSSIMISSGDKQQVDSPKESGVRNDLQEVQTSSGSANSRPTRRMSRRKRRTF
TIDASPAVTEMPNPPSQKVQQVSDSLDQPIPDRTTPTKDVSLSEIAPEDSSHKELSKASK
SPQERVSMEVTDEKLQCPQPVISVTRKKSKSLPLSQGQKNININLEDSVNPSLSPSNTSQ
VSDVCGSSLKLKRKSRSGRRHTQSPVTCRDVEEPVKLLSPSSGGNKFDEKCNKEAGGSSG
RRSSGRISKVLSKSGSLPDGSAIPTTPGASEMNEISSNVIIPARTLQQSRGSLHEGAEDD
PQQTPGTSPRGLRRSARQSRDIAQNRSEVASSNTVKEDQKSEQKISSQTVECFSVVDESA
RLTLAEKEESHESNVSFHSVEDIFNLDEESRDMFDEEEMASHQQEEESESMNAEIVFISQ
GDNARGSSGQVNAKKLSGDSSQLKHEMKKETTRTLKKRPDESIDIEATDDAVVSQMSCQY
EDTEAPIPPTPPCPDMSKSRTLSFLHTSGLSKAIAKKKKVQQEIEPDISSLLCPEQDTIS
KQQDGAQSKSLVMETPSVVSRKRKKVPDSGDKSIADTPIKPKCRSVDQREKGAVEDASND
QGGVQDNVFELDEPQRKTSRKVTSQVIGETQSEPTIKSSNESDEVIKNRTRRRKQVIADD
VSDDDDDDDDDNDDDEEEGTIGRPRQRRAKRMVQVGRDEEEESDDELIPCSFLQPLAKDE
EDEEEEEVNDPKVLFSDHTDPHQVTDGGSASSEDSCASHHMNLTNASSILSSQSEIMNTQ
QQEKTREDMQALEAQMAELQAALARERGSRSNDDTNDEEEENGLLVEDTEGASTPDSKRQ
KFSGRTQHSSPKRTEDRVGLESSSDEEDEMDKVESMMEPRSPSPPPPLSPRSLKKASSSS
SMTDSIRSVTNMVEQFRKSSSKKVTTKKRRVEDELNNSSDGGESDDGAVMVSAKSSRSSV
SPRTGSARRRSKKRRICSVDSEDELLQDEANSPRNSRNTSVDRTKEHHETVHPVTPPSRT
TPRSTPTVSSNRISTGGRPSRSPHGGSHKAPESITPRGQQTPRIHTPADRAARRTPETSS
IPSPVDASMRTQRTGSIQSGRRSGEQSVRTPEAGLGPSPRPSSRPMSLIATGLNRLELRQ
VEQLTSRLANCRFASAFNANTTHVIVKTDSSLVCERTLKYFQGIAARAWIVSFQWVHDSL
KARKLLAEEDYEVKGDVVNGLDHHGPKRARTLDGPGFMDKFDLCCIGPFTGLNKDQLVGL
CEMCGASTVQHPSLFPYNPGRKAFIIIEPNLDTDRDYQGLQRKFRVPVISREWVLDSIAL
YKSQPITDYLLSGLTSASTDQPIIDIESDDE
NT seq
7656 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgtcagactgaagaaaatcaccgatagcatcgggttgatgcagaaaaacttg
gaatgttcaatttgtttggatttgctccaagatcctgtttcaaccaagtgtgatcaccag
ttctgcaatttctgcgttctagcgttgctgcaaagttcaagaaagccatcagcacgctgc
cctttatgtaaagtcatcatcacgaagcggagtctgactaaaaatgagcagttggataag
atcgtcaaagctgtacgttctgttattactgctgtggaggaagactcagggttacaatgt
tcccctcctcgaggtccagttttcatctcccaacctgatcctaagcctagagagccaaca
cctaagaagaaggccaagggcaaaggtcaagtgagatcaagcaacgtgcggaagaccaaa
cgcaaagctgccgagaccgtgagcgtgtatcgagatcatgatagtgattccagtgatagt
gatgcctttgagctgcctctagttggtcataccaatatcagttcatcattcccgagactg
aagaccggtgggaagaaggactccaaagatgaggatctggaaaatgaagaaatggagaaa
gaggctgaggacttcctgacttccctcaacgctgctcccctatctagccatggggacatc
gtctccgggcacagcaatgagttggaaagaatcaataatgaaataaatcttcttcccatc
aattctggacatcacaaggagaacaagaatcctgaccttgacagtctaccacatatacca
caggatccaactcctacagattcagaaatcttttcagtccctgcacctaaaggacctagc
aaagtgaacaatcttaaagcaggggatcaagatccctatgagtttataccgagtcagcgc
acaccacggaaggtgaaacggaaggcaggaagaaagaaaaatcagaatgggaagaaggag
ttccctatcctgaaaggcaggtttctaaagccaaagagagacaacaagagtgcaagtagc
tgttctgaaagtgatcaagagaattccatgactcaaagcaaagctgcagataagcttgct
gcttcagttacaccttttcaagaaagcaattcaactgcccactcaaaaggacaaatcact
catccattatgcagcaatcatgatgatggcggtaaaaaagtatcgccttctaatcaccca
aaggacgctggaattgtcacaacccttgttgaagaaggtgatctagttgatatcgcaaat
gttgtcatagaagatactgtcagcggtcttgacaatgaaggtggtgttgatctcaatgaa
gatggtaatgctcaggaggaggataaagctcagcctgttacatcaaacttgggaaaacat
cctttgcctattactccagttgtggttatcagggcaaggaatgttggtggcaatatccaa
ggaagtcagcagtcatcagaaggagggggtatcactgactcccagccagtagtgatcaac
aggaatcatggacgaagggtctttgccaccacgtacggcaaggccaagaatggcgttgac
aagagtccaccccttgatcctcaggagaggatcttggactggctggtcagtaagaatgca
ggaagtgatgagtctgacgacaacgatgatgatgccgatgttggagatgcagagaaaaga
gagacagttgaaaagacagaggatcttcaaggcactggaaatgatcaagaaattgatgat
gtaattgttgggattttgcccttggaagaagccccagaatctacacctaaagaggtcatt
atagtggatcaactagaacctgcagaagaatcaaaatcccccaagacaataattacttcc
ccaaagaaagttcaaggagaggttagaaatggcagacgtcgttcaggtagacataacaaa
gaaacaagaatagaaaatattacacttgatcatgaagaaaatgagaaaggaattaatgac
aaagattcaactttgaatagatcatcagaggatgtggaaaaggagtctttacctagccgt
aggaccatgaagcagcgcatgaaagaaaacctgaaggaacaaacagaagctgcaaagaaa
gaatcagatgctgccaaaaaggaatcggaagctgctgctatcaagagtgactgggaactt
gccttagaacttgctcgtcagtttggcactgagccagagcatctgaaggctgagccaact
gaacttggtggacgatcatctcgaaggaggaaaggcaaactcactattgaaaaggtaccg
gagagtagatctgtcagaaaaactggacgccatgcccaagaaaatcaggagaaagggaaa
agagagtctactgaatctttggacattgattcatttgaaactcaaactctcaataacgtt
gcagtcaaaacaactgtgaaagaaaaaagtagggctgcatcagaaaagagaaaagctaac
tctgacaaaatgaaagcttctccaggaagtcaaacaaatatcctgagtggtaaagttcta
caaaatttcactcctgtgaataatatcctcaagattcctgagactccttgtatttctgat
ccacccaaaggagagaatagtcttgagagagaactcccttccaaaccagactttttcgaa
caacccaaaacaaaggccccaagaccaaggaagtcaaaggaaagcaagagctcgtcaaat
caaaaaggagaatccattcctgaaagcaaattaaccagtcagttgaccccacctttgagg
aggtctaaacgaggctctcttcctgagactcttaacagctttcatgttcctgggcaagtg
ctgtctctacctgcagagaagaaggaggttgaaggaatgggagaggagaaaagcaatgga
agaactagagaaagtaggaaaatactatcaggggctagtgatctaggcattgcagcagaa
tcaagtgtatcggtcattaagggaacagagtcagaatcgagagagaaggttatcgatgtt
gcagaacctcctatgtcatcactgcctctttatactgaagacattcccaaagaagacaag
ggcagtgtgtgcaattcccaaaggtgtaaagggtcagataccacagagtccattgactta
gagattgatagtgatgtgtatgaagacccagatgaagctttggagtctgaactgccagaa
tcctcaggattagagaagaatgatgtttgcagttccgtgaaacagaaatctcttgatgat
gagatgtccattatggattgtattcttccatcattatccagtcaaccacatccttctgtg
ggaatttctcctggcccatgtgagaacagcagtggcacagcatctgatcttggtcaagca
gaagcagacgtttccttgcataagaaagcggaggaggtaattacagtactgtctggttct
agttgttcagtccagcagatgagtcaagcaagtgtaacagtcatctcacaggctaaagcc
tcgggttcatttccaatgtctcttgatgtgaactcccagccgagtgaatctctgctacag
cctctgaggaaatctaagagaaaagtgtcccaggatggacatcaaggaagcaaacttcag
acatcagaaaatgatgtcaccaagaactcttccattatgatttcatctggagataaacaa
caggttgatagcccgaaggaatccggtgttcgtaatgatttgcaagaggttcagacttct
tcaggatcagctaatagcagaccaacaaggaggatgtcccgtaggaagagaaggacattc
actattgatgcaagtccagctgtaacagaaatgccaaacccaccaagtcagaaagtgcaa
caagtttctgatagtctggatcaaccgattccagacagaacaactccaacgaaagatgtc
agcctatctgaaatagcaccagaagactctagtcataaagaattaagcaaggcatctaag
tcacctcaggaaagggtctctatggaagtaacagatgaaaagttacaatgtccccagccc
gtcatttcagtgaccagaaagaagagtaaatccttacctttgtctcaaggccagaagaat
attaacattaaccttgaagattctgtaaacccatccttgtctcctagtaacacctctcag
gtgtcagatgtgtgtggatcatcactcaaattgaaaaggaaaagtcggagtggtagacgg
cacactcaaagtcctgttacctgtagggatgtggaagagccagttaagctgcttagtcca
tccagtggaggtaataagtttgatgagaaatgcaacaaggaagcaggtggtagcagtgga
agacgttcttctggtagaataagtaaagttctatcaaaatcaggttcattacctgatggc
agtgccatcccaacaacaccaggtgcatctgaaatgaatgagatctcatcaaatgtcatc
atacctgccagaactctccaacagtcaagaggcagcttgcatgaaggggcagaggatgat
cctcagcaaacaccagggacgtctcctcgggggctgcgaagaagcgccaggcaatcaaga
gatattgctcaaaatcgaagtgaggttgcttcgagcaatacagtaaaggaagatcagaaa
agtgaacagaaaattagcagccaaactgtagaatgtttctctgttgtggatgaaagcgct
aggttgaccttggctgagaaggaagagtcccatgaatccaacgtgtctttccattctgtt
gaagatatcttcaatctagacgaagaatcaagggatatgtttgatgaagaagaaatggct
agtcatcaacaggaagaagaatctgagagtatgaatgcagagatagtgtttatatcacag
ggagataatgctcgtggctcaagtggtcaagtgaatgcaaagaagttatctggtgattca
tcacaactgaagcatgaaatgaagaaggaaacaacaagaactctcaagaaacgtcctgat
gaatctattgacattgaagcaacagatgatgcagtggtatcacaaatgagctgtcaatat
gaagacactgaagcacctataccacccactccgccctgtcctgacatgtcaaaatcacgc
acgttgtccttccttcacacaagtggattatcgaaagcaatagcaaagaaaaagaaggtg
caacaagagattgaacctgatattagttctctcctgtgccctgaacaagacaccatctcg
aagcaacaggacggggctcagtcaaagagtcttgtcatggagacaccaagtgtggtgtcc
aggaagcgaaaaaaggtacctgactctggagacaaaagcatagctgacacgcctataaaa
cccaaatgtcggtcagtggatcaaagagagaaaggagctgttgaagatgcctctaatgat
caaggcggtgtccaggacaatgtctttgagcttgatgaaccacaaagaaagacctcaagg
aaggtgacatctcaggtcattggagagacacagtcagaacctacaatcaagtcctcgaat
gagagcgatgaagtgattaaaaatagaacaagacggagaaaacaggtgatcgccgacgac
gtcagtgatgatgatgatgatgatgatgatgataatgatgatgacgaggaggaaggtact
attgggaggccgagacaaaggagggctaagagaatggttcaagttggaagagatgaagag
gaggaaagtgatgatgaattgataccatgttccttcctccaacccttggcaaaagacgag
gaggatgaagaagaagaggaggtgaacgatcccaaggtgctctttagtgaccacacagat
ccccaccaagtgacagatggtggatcagcgagttcagaagatagttgtgccagtcatcat
atgaatctcaccaacgcttcatccattctctccagtcagagtgaaatcatgaacacacag
caacaagagaagactcgtgaagacatgcaggcccttgaggcacagatggctgagcttcag
gcagcactggccagagagagaggaagcaggagcaacgacgataccaatgatgaggaggag
gagaatggtttacttgttgaagatacagaaggtgcatcaaccccagattcaaagagacaa
aagttctctggaagaactcaacacagtagtccaaagaggactgaggatagagtaggttta
gaatcttcctctgatgaagaagatgagatggataaagtggaaagtatgatggaaccaaga
tctccatctcctcctccacccctgtcaccacggtccttgaagaaggcatcatcgtcctcg
tcgatgaccgacagcatccgctctgtcaccaatatggtggaacagttccgtaagagtagc
tccaagaaggtgaccacaaagaaaagaagggtagaggatgaattgaataatagctctgat
ggaggtgagagtgatgatggtgctgtcatggtttcagccaaatcatctaggagctctgta
tcacctaggacagggtcggcaagaaggagatccaagaagagaagaatatgtagtgtggac
agtgaggatgaactgcttcaagatgaagcaaactcaccacgaaactcaagaaacacttct
gttgataggacaaaggaacatcatgaaacagtgcatcctgttacacctccatcacgaaca
actccacgatcaactccaacagtcagttccaacagaatatcaacaggtggaagaccatca
aggtcaccacatggaggaagtcacaaagctccagaaagcatcactcctcgaggtcaacaa
actcccagaatccacaccccagcggatagagcagctagaagaacccctgagacttcctcc
ataccaagcccagtagatgcttccatgaggacacagaggacaggcagtatccagtctggt
agaaggtctggagaacagtctgtgagaactcctgaagcaggtctgggtccaagtcctcga
ccttcctcccgacccatgtctctaattgctactggcctgaatagattagaattgcgtcaa
gttgaacagctgacaagtcgactggccaattgtcgttttgctagtgccttcaacgcaaat
accactcatgtcattgtcaagacagattcatcgctggtttgtgaacgaactctgaaatat
ttccaaggcattgcagcaagggcatggatcgtcagctttcaatgggttcatgacagcctg
aaagcaaggaaactcttggccgaggaagactatgaggtcaaaggtgatgtcgtcaacggc
cttgaccatcatggaccaaagagggccaggactctagatggaccaggtttcatggataag
tttgacctatgctgtattggacctttcactggtttgaacaaagatcaactagttgggctg
tgtgagatgtgtggagcctctaccgtccagcatccgtctctcttcccatacaaccctgga
aggaaggcattcatcatcatagaacctaacctagatacagatagagactaccaaggtttg
cagagaaaattcagagttcctgttatatcaagagagtgggtcttagacagtatagccttg
tacaagagtcaaccaatcacagattacctcttatcaggtttaaccagcgcctcgacagat
cagccaatcatagacattgagagtgatgatgagtga
DBGET
integrated database retrieval system
