Lytechinus variegatus (green sea urchin): 121426041
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Entry
121426041 CDS
T11173
Name
(RefSeq) integrin alpha pat-2-like
KO
K06584
integrin alpha 8
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04512
ECM-receptor interaction
lvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121426041
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121426041
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lvg04515
]
121426041
Cell adhesion molecules [BR:
lvg04515
]
Integrins
Integrin alpha subunits
121426041
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GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
121426041
NCBI-ProteinID:
XP_041478107
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All DBs
Position
13:5799261..5882283
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AA seq
1079 aa
AA seq
DB search
MLNIDLLTMYRVKIRTLIFQILVSLILIALAGCYNIDTTSPLIFSDDHVDSRFGLSLTLH
QHGSENMLVVGAPKGQSNYTDIVRGGVAYKCSFTNQNASLAGNCTEMQLDTRGNDFSESD
RQIFNKSDQWLGAAMSSGGPNGSLVICRPRYQYYFYRSNGLQQQQRDLLGGCFVLTQEDF
DHPNILLPCITGGDRRCQFGFSVDAKKDHIVYGAVGLGRQEGQFWKSDSRGEQRQKRPKR
KVGVTRENNYRGYTVASGDFKGDSNPEYAISVPRHKQAFGKVVLYDSDLNEYNELENSDM
GSYFGHTLVTSDLNNDGYDDLVVSAPLFTDSISNNGSLWEIGKVFIYYNDRNGGFGYADT
ITGRDVGGRFGYAATSLGDINVDGFNDLAISAPFIDKGNRGKVFIYHGIGHNARLPLTPV
QVLESRQFGQVLVPFGCALSAGVDVDSNSYPDLAVGAYRSQVAVVYRTRPSFTASMQVFH
EPRLLDLDILDHLLPDGTLTTRMNLNVCFSFVGLGLPKSIVIGYNITIDAAKSQSPRMAF
MESRSATLQSTIVASTESTMHCTRHKVYIQPSIVDKQTAISVVCTYDYLEDQQANWTPAG
YLIPVLSRWAVTRSAFSVPLKRNCANETCFPNLVISPKAETDYLIAGDNGEASIRVDIEN
HGEDSFYSTLEIRIPDDINFSKLDRTVTDSIVTCSVTRRVVVCHIGNPLKAGGKVNMRIC
FQTEDLSVTESEVIFAMTAKSGDDELEHHSEDNHANVSIPVFSSSNITLRGEVNQELLLF
KEKDYPLNRVVEFQNDIGPLITYTISLVNRGPSPLGPTELVLSWPTFPVLNGQLLYPVSA
ITDNDGDCYVINGQWNPENLTTTFGNYIRGRRHRRDGPLSTSSQTRIASPLASSQLKSLA
CRSSLSPCDKIVCYVDTLARGRHSERDEVVVIVTARLKTDLLVKYNITGFKLMTRVEALV
KNSLHPSTPFLNLPTADIQISTTVLGEIDQPQQHIPYWVYIVAIAGGLFIQLVVIIILQK
TGFFKRKKISPKQRECLNLEKEPVVLLSATPLERNSLTSPMQRNPLACDKLFDIDNRRS
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacatcgacctattaacgatgtatcgtgttaagatccgaaccctaatctttcag
atcttagtatctctgatactgattgccctcgccggatgttacaacattgatacgacatcg
cctctcatattcagcgatgatcacgtcgacagccgtttcggactgtcactcactcttcat
caacatggatctgagaatatgttggttgttggtgctcccaagggacaatccaattatact
gacattgtaagaggaggcgtggcatacaagtgttccttcaccaatcaaaacgcgtcactg
gctggtaattgcactgagatgcaactagacactcggggtaatgatttctcggaatcagat
cgacaaatttttaataaatctgaccagtggttaggggcggcgatgtcaagcggaggaccc
aatggatcattagtgatctgcagaccccgatatcagtattatttttaccgttccaacgga
ttgcaacagcaacaacgggacctcttgggtggatgcttcgtccttacccaagaagacttt
gatcatccaaacatcctactaccatgtatcactggtggtgacagacgttgccaatttggc
ttcagcgtagatgcaaaaaaggatcatatcgtttacggagctgttggacttggcagacaa
gaaggtcaattttggaaaagtgatagcaggggtgagcagagacaaaaaagaccaaaaagg
aaagttggcgtcacaagagagaacaactacagaggctatacagtggcttctggtgatttt
aaaggagattcgaacccagaatatgctatatcagtgcccagacataaacaggcctttggc
aaggtggttctgtatgatagtgacctgaatgagtacaatgaattagagaatagcgatatg
gggtcatatttcggccatacactagttacttccgaccttaataatgacggctacgatgac
ctggtcgtcagcgcccctctttttaccgattccatttctaacaatggttcactttgggag
ataggaaaagtcttcatttactacaacgacagaaatggtggttttggctatgctgatacc
atcaccggtcgtgatgtcggcgggaggtttgggtatgcagcgacgtcacttggggacatc
aacgtcgatggattcaacgatttagccatctctgccccattcattgacaaaggaaacaga
ggaaaagtctttatatatcatgggataggccacaatgccaggctgcccttgacgccagta
caggtattagagtccagacagtttggtcaagtccttgtcccgtttggttgtgcgctgtca
gcaggagtcgatgtagactccaattcttatccagatctcgctgttggagcctataggtcc
caggtagcagttgtttacagaacgcgaccatctttcacggcatcaatgcaggtattccat
gaaccgagattgcttgatctagatattttagatcatctccttccagatgggacacttact
acgaggatgaatctgaacgtatgcttctcgttcgttggccttggtctaccaaaatcaatt
gtcataggttataacatcaccatagatgccgcaaaatcacagtctcctcgtatggcattc
atggaatcgcgctctgcaacactgcaatctacgatcgtagcttcaacagagagcacgatg
cactgtacacggcataaagtctacattcagccatcaatagttgacaaacagactgctata
tcggtggtttgtacctatgattatctggaggaccagcaagccaactggacacctgctggt
tatctcataccggtactcagtagatgggctgttaccaggtctgcattttcagtacctctc
aagcgaaattgtgcgaacgaaacttgttttccaaatttagtcatatcgccaaaagcggag
acggattatcttatagctggtgataacggggaagcttcaatacgagtggatatcgagaac
cacggcgaagattcgttttattctactctggaaataagaattccagacgatatcaacttt
agcaaacttgatagaacagttacggattccattgtgacgtgttcggtcactagacgagtc
gtcgtgtgccacataggaaacccgctaaaagcaggaggaaaggtgaatatgcgaatctgc
tttcaaactgaagatctctcagtgacagagtccgaagtcatctttgcaatgacggctaaa
agcggagatgatgaactggaacaccattccgaggacaaccatgcaaatgtttcaatccct
gtattttcgtcatcgaatattactcttagaggtgaagtcaaccaagagctgttattattc
aaggagaaagactatcctctaaatcgagttgtggaatttcaaaacgatattggtcctctg
attacttacacaatatcgctggttaataggggccctagccccctcggtcctacggagctc
gtcctctcctggccgaccttccccgtcctaaacggtcagcttctctatccggtcagtgct
ataaccgacaatgatggagactgttacgtcatcaatgggcagtggaaccctgaaaatctc
acaacgacatttggaaattacatccggggcagacgacatcgtcgagatgggcctctttcc
acatcctctcaaacgagaattgcgtctccattagcatcgtcccaactgaaatcgcttgcc
tgtaggtccagtttgtcaccatgcgataagatagtgtgctacgtagatacactggccagg
gggcgacactcggagagggatgaagtggttgtcatagtaacagcacgcctcaaaacagat
ctcttagtaaagtacaacattacaggattcaagttgatgacccgtgtagaagctttagtc
aaaaatagtcttcatccaagcactccgtttctcaatttaccgaccgctgatattcagatc
agtacgacagtgcttggggagatcgaccaacctcagcaacatataccgtactgggtgtac
atcgtcgcaatcgcagggggactatttattcaactcgtggtcatcatcatactacaaaag
actggcttcttcaagcggaagaagatttctccaaagcaaagggaatgtctaaacctggag
aaggaaccagtagtcctgttgtcagcgactccattagaaagaaattctttaacttcacca
atgcaacggaatcctctcgcttgcgacaaactcttcgatatagacaacagaagaagttaa
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