Lytechinus variegatus (green sea urchin): 121426139
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Entry
121426139 CDS
T11173
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16-like
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
lvg
Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvg03021
]
121426139
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
121426139
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Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
Beta-prop_IFT140_1st
WD40
Beta-prop_WDR35_TULP_N
Beta-prop_THOC3
MED16_beta-prop
Beta-prop_IFT122_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_WDR5
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
121426139
NCBI-ProteinID:
XP_041478245
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Position
13:26880747..26907287
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AA seq
847 aa
AA seq
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MELAFVADWPKTDANVCIKKLIDDCVLSWSCRNTVAFTAIGNPKVPEEREVYRPTIHIVD
PDRPWEVCSFGSEHNDAIQALQWNSEGTQLLSADGSGSVYLWQMQHHLMNDWVCTAESHI
PGEPVVAISWLRNGMKITYNVDNIDSPNMLDKFSRTRFTPSLAEFGMRPTQGWVLVTGTG
LVSVTVLKDGKTTVVTERLGNSRNHIALADIAFTSTGHILIATSDGGTRCPLQCFKVTPA
WKDDKLHLSTEYLPSLYMQCLCEITSRDKYPSITSVQFINKECTEQQLRSAPTEQLLVCA
SGSMGSCIECWTLKKEAIPLHKLFQAGSPHHRDQPTTLKWVFSATYSDSSIITSIALPKL
PLKLSMNSLYNGPGMAIAVANQEGTIKLLHRSSLKPCAALRYEGIMKAEPGPPAKRPNFN
GKHLVCMEMSVTCCSMVAIDRTGALCMFKIEPTLGQGLDQGTARVHTIAQVVHLLEYCLV
TGYDWWDLLLTITPNMVDTVLDRLSDSVNRQSSSTQELLFTRLVAVKASLYRLSASGSGK
AVDCYGKLLLHSTANVFKSLLRASAISSQDKGPAEKLSALCANSTETNPDTLLKKLDSKE
YVVEPATLQCLQPLIQWVADYTIVSLAAVPPPGSPTNRPGVSLMRDVPTLVMLRELLLII
RMWGRLQKNCLPVFTTTADDPDVLIPSLFRLVSQIWVHYHDKQPTELDESLIDECTLLPS
QVGVPPWDLSPVTEGYTGKIHVRHGQSSFQFGTLPGRMISIATFSLGPEIYTRSLTDRLH
QKFDVVRKLSLGVTPHKEIRRCSRCSCISLMPPVTQQSSTVRVVWEKRWERNCLCGGLWR
KVTVHPA
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgcatttgttgctgactggccgaaaacggacgctaatgtttgtatcaagaaa
cttattgatgattgtgtgctcagttggtcatgccggaacactgtagctttcacagccata
ggcaatcccaaagtacctgaagagagggaggtttaccggccaacgatacacatcgtggat
cctgacaggccatgggaagtttgcagcttcggaagcgagcacaacgatgccatccaagct
ttgcagtggaacagcgaggggacccagcttctctctgctgatggttcggggtctgtttac
ctgtggcagatgcagcatcacttgatgaatgactgggtgtgtaccgctgaaagccacatt
cctggtgagcccgtcgttgctatctcttggctgcggaatggcatgaagatcacttacaat
gttgacaatattgacagccctaacatgctggataagttctccaggacacgtttcactcca
agcctggcggagtttggcatgaggccaacacaaggctgggtccttgtcacgggaactggg
ctggtttctgtaactgttcttaaagatgggaaaacaaccgtcgtgacagagagacttggg
aattcaagaaatcacattgctttggctgatattgccttcacaagtactgggcacattctg
atagctacatcagatggaggtacaagatgtcctctccagtgttttaaagttaccccagca
tggaaagatgataaactgcatctgtcaacagaatacctaccttctctgtacatgcaatgt
ctgtgtgagatcaccagtagagataaatatccatctataacatctgttcagttcatcaac
aaggaatgcacagaacaacagcttaggtcagcccccactgaacaactcctggtttgtgct
tcgggttccatgggatcttgtatagaatgctggacattgaagaaggaggctataccatta
cacaaactattccaggcaggttctccccaccatagagatcaacctacaacactgaaatgg
gtgttcagtgcaacctacagtgattcttccatcatcacctccatagctctaccaaagcta
ccccttaagctctctatgaactccctgtacaatggcccgggtatggctatagctgtagcc
aaccaagaagggaccattaaactattacacagatcatctctcaagccgtgtgcagcacta
cgatacgaaggaatcatgaaagccgaaccaggcccaccagccaaaagacccaacttcaat
ggcaagcacctagtatgtatggagatgtctgttacgtgctgtagcatggtggctatagat
cgaactggagccctctgtatgtttaagatcgaaccaacgctgggccaaggcttagaccaa
ggtacagcccgagtgcataccatcgcccaggtggtacaccttctagaatactgtctcgtc
actggctatgactggtgggatctactgctgacaatcactcccaatatggtggatacggtg
ctggatcggctttcagattctgtcaatagacaatctagttctactcaggagcttctcttc
acaaggcttgttgctgtcaaggcaagcttgtacaggctttctgctagtgggtctggcaag
gcagttgactgttatggaaagctgcttctccattccactgcaaacgtcttcaaatcgtta
ctcagggcaagtgccatctcctcacaagacaaagggccagcagagaaactcagtgccttg
tgtgcaaacagcactgaaaccaacccagacacattgttgaagaaactagacagcaaggag
tatgttgtcgaaccagctaccttgcagtgtctacagccattgatccagtgggtagctgat
tacaccatagtgagccttgctgctgtaccccctccagggagccctaccaacagaccaggg
gtgagtttgatgcgagatgtacccactctggtgatgctgagagaactccttcttattatc
aggatgtggggtagactacagaagaactgccttccggtctttaccactactgcagatgac
cccgacgtactcataccaagtctctttcgactggtctctcaaatttgggttcactatcat
gataagcaaccaacagaactagatgagtctctcattgatgaatgcacactcttacctagt
caggttggtgttcctccatgggatctgtctcctgttactgaaggctatacaggcaagatc
cacgtcagacatggccagtcatcgttccagttcggcacccttcctggtcgtatgatcagc
attgctactttcagtcttggtccggagatctacacccgatccctgacggacaggctccat
cagaaatttgacgtggtccgtaagctgagtctcggtgtaactccccacaaagagattagg
agatgctcaaggtgttcctgtatatcactgatgcctccagtaacccaacaatcatccaca
gtgagggtggtctgggagaaacgctgggagaggaactgtttgtgcggaggtctgtggcgg
aaagtgacagttcatcctgcataa
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