KEGG   Lytechinus variegatus (green sea urchin): 121426141
Entry
121426141         CDS       T11173                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
lvg  Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lvg03016]
    121426141
Enzymes [BR:lvg01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     121426141
Transfer RNA biogenesis [BR:lvg03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    121426141
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH zf_CCCH_4 zf-CCCH_4 zf-CCCH_2 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 121426141
NCBI-ProteinID: XP_041478247
LinkDB
Position
13:complement(2822594..2842436)
AA seq 668 aa
MADVQAEAGIPAVDSETKGTESNEDLAQDKVQGPSEEEMLAHVRAQPGTALVKAKYIDFA
RVAEGITSKQDRKDASEVTKEKRKEPEDPQPGGKKQKKIKGMNKNRPRDHQFMPHAERPC
LDFLSGKTCRFGENCKFSHEIQKLMESKAPDIGPRCISFERFGTCPYGLLCRFGGAHIDD
NLKSVVNDEKVKETGGKFDVRNIMSKDLQSKLRKRNFGFSKSDQYLRTLGGKKKGFKKHG
GPAGKDNIASNTTSTASTGENGTLEGSTKVGGDAIQDGNGTQSPSAAVPTSEDVGSHAAG
TVTDSDVIRLRPEEKRKLDVKDKLLLAPLTTVGNLPFRAVCKKLGADITCGEMAMCTNLL
QGQTSEWALLKRHPSEDVFGVQLCGAFPDTMTKCAELLNNTIDIDFIDVNVGCPIDMVYH
KGAGSGLMNRMGKFQEIVRGMSSVLDVPLTVKMRTGVHNESRIAHKIIPRVYEWGASVVT
VHGRTREQRYSKLADWDYLRQCTEAADPYPFIGNGDILSFEDANFFREKSGSAGQMIARG
ALIKPWIFTEIKEQRHWDISSSERFDILQDYVNLGLLHWGSDTPGVRKTRRFLLEWLSFL
HRYIPVGVLERPPQKINERPPYFVGRNDLETLMASANCADWVKISEMFLGPVPDDFLFLP
KHKASSYK
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggctgatgtccaagcagaagctggaattccagctgtggattcagagactaaaggcaca
gaaagtaatgaagacctggcccaggacaaggtccaaggaccttctgaggaagagatgctg
gcccacgtcagagctcagcctggaactgcactggtgaaagcaaaatacattgattttgca
cgtgttgcagaaggaatcactagtaaacaagatcgcaaggatgcctccgaagtgaccaag
gagaagcgcaaagaacctgaagaccctcaacctggaggcaaaaagcagaaaaagatcaag
ggtatgaacaagaaccgacccagggaccaccaatttatgccgcatgcagagcgtccttgt
ctcgatttcttgagcggcaaaacctgcaggttcggggaaaattgcaaattcagtcatgag
atccaaaagctgatggagagtaaggcacccgacatcggtccgagatgtatcagttttgag
agattcggtacctgtccgtatggtcttctctgccgctttggaggtgcccacatagacgat
aacctaaagagcgttgtcaatgacgagaaggtcaaggaaacgggtggtaagtttgacgtc
aggaatattatgagcaaagacttgcagagtaagttgaggaagaggaactttggtttcagc
aaatctgatcagtacttgagaactttgggaggcaaaaagaaggggtttaaaaagcatgga
ggacctgccggaaaggacaatatcgcaagcaataccacaagtactgcaagcaccggtgag
aatgggactcttgaaggatcaaccaaggttggtggggatgcaattcaagatggcaacgga
actcagagcccttctgctgcagtgccaaccagtgaagatgttggcagccatgcagcaggg
actgtaacggatagtgatgtcatcaggcttagaccagaggagaagaggaagctagatgtt
aaggataaactccttcttgcgcccctgacaacagttggtaaccttccattccgggctgta
tgtaagaagcttggtgcagacatcacctgcggtgagatggcaatgtgtactaacttactc
caaggtcagacgtctgaatgggcgctactgaagcgacatccttctgaagatgtctttggt
gtccaactttgtggcgctttcccagacacaatgaccaagtgtgctgagttgttgaacaat
acaatagacattgatttcattgatgtcaatgttggctgtccaattgatatggtgtaccac
aagggagctgggtctggtttgatgaacaggatgggcaagttccaagaaattgtcaggggg
atgagttcggtcctagatgttcctttaaccgtaaaaatgagaactggcgtccataacgaa
agtcgaattgcacacaagatcatacctcgcgtctatgaatggggagcctccgtcgtcacg
gttcatggacgtacgagagagcagcgttattctaagcttgccgattgggattatctgagg
cagtgtacagaggctgcggacccctatccattcattggaaacggagacatcctgtcgttt
gaagatgcaaacttcttccgtgagaagagtggatcggcaggtcagatgatagccagaggt
gccctcatcaaaccatggatattcactgagatcaaagaacagagacattgggatatctca
tccagtgaacgctttgacatactacaggattatgtcaacttagggctcttacattggggt
tcagacactccgggagtgcggaagacaaggagattcctgttagagtggctctcgttcctc
catcgatacatcccggtaggagtcttggaaagaccacctcagaagatcaacgaaagacct
ccttactttgtcggtcggaatgacctggaaaccctgatggcgagtgctaactgcgccgac
tgggttaagatcagtgaaatgttccttggtcctgtacctgatgacttcctgttcttacca
aaacacaaagccagctcctacaagtga

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