KEGG   Lytechinus variegatus (green sea urchin): 121426346
Entry
121426346         CDS       T11173                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06583  integrin alpha 7
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg04512  ECM-receptor interaction
lvg04518  Integrin signaling
lvg04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121426346
   04518 Integrin signaling
    121426346
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121426346
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lvg04147]
    121426346
   04515 Cell adhesion molecules [BR:lvg04515]
    121426346
Exosome [BR:lvg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121426346
Cell adhesion molecules [BR:lvg04515]
 Integrins
  Integrin alpha subunits
   121426346
SSDB
Motif
Pfam: Integrin_A_Ig_3 FG-GAP Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP_3 E1_DerP2_DerF2
Other DBs
NCBI-GeneID: 121426346
NCBI-ProteinID: XP_041478551
LinkDB
Position
13:30094972..30153711
AA seq 1124 aa
MARIPVAFATTFCILLAVIERTLCFNFETRLPVIKEGPGESYFGFSVAEHILTDTQPAQP
FAESLLIVGAPVYQTNISATKPGGVFKCPFTSSYSDCEVLELDTEGNTDVDIKDNQWLGV
SVVSQGPGRPVAACAHRHIYRPPSVDEYRGLGKCYFMKANLEKDIFVKNGYQPCISQTRP
NNYDGILYKYCQAGTDLDVTRHFSTDANSASEYIMGVPGSDNWLGGIALANVPDSIRSIN
LITPLDYANNRVGFNSYLGFSVASAKLMSGNAQTYIAGAPRSESMGAVLTLKSESGQSPS
PIYRIDAEKPSSSFGYDVAAADLNGDGYDDLIIGAPQYFYRDPSNIYGGKGGCVYIYLNK
AHDGTFDNVEPIKLYGPIDSLFGQVIANIGDINLDGFEDIAIGAPYENNGQGAVYIYLGH
SQDGIRQPAAQKITPSDLPMGVNGYPYPNASFGYSISGGVDLDGNGFPEITIGAYEVQQI
AVLRGRPVINIEASLTLSMTEIDPNSTNCVYSNRDSICFQVELCMSYYCLAPEFNDPITI
NFDIEAEGLRRSKVLNSRVVFEDSGIHSLTKQTLVITNDDEACTPNYNVVLKPGYTDIFR
PIPINLTYYIPEEEANMPQPGEPLPSMTPFPILQENTQTVLIEEVHFSKECAKDDGKCIT
DLDVSASIDVTGTPPVLRVGQQLEISMSVNIANREEDAYDARLVITYPSYLGFISLSSDS
PAITAACNAEPFEEGANETSIICELGNPYSAGTMDSFVVLYDASTVPPDAEEFNITLVAS
SMVDDTAEDSNPDNNIKRFTIEVESITDILISGKGPEQLYISGQVIGESAMTYFEDIGLA
VNQEWTIFNEGPGAVNTARVTIDFPYEVANGKWLLYLTEMPFVKDNKGSCNVTPAVYVNE
LGLRPKNGGVAYTPVGPDSGAAEVPQSRKRRQAEAEAVSSGGETTTARKDITLDCTQGNA
QCLTIYCDLDPLTKEPDMNQVVIIVRSRIWNSTFLEDYSNARVKIITEGYIEIESAPYIT
QKREDNDRFKLSLTVTPDIKTLPPSQPLQWWIIALAVIGGLILLILLIILLWKCGFFARP
GTNGGGPCGFFERKTGYKYATVTQQQASGKAKTEKTAYYDDMYY
NT seq 3375 nt   +upstreamnt  +downstreamnt
atggcgaggattcctgtcgcttttgcgacaactttctgtattttattagcagttatagag
agaacattgtgttttaattttgaaacaagactgcctgtcattaaagaaggaccgggggaa
agttattttggattttcagtcgctgaacatattctcacagacactcaaccggcgcaacca
tttgcagagagcttattaatagttggcgctcctgtctaccaaaccaatatcagcgccacc
aaaccagggggcgtgttcaaatgtccattcacttctagttattctgattgtgaggtatta
gagcttgatacagaaggtaatactgatgtggacataaaagacaaccaatggctaggtgta
tctgttgtcagtcaaggtcctggtcgaccagtggcagcatgtgcccacaggcatatatac
cgaccccctagtgtagatgagtaccggggccttggaaagtgctacttcatgaaagcaaac
ctggaaaaggacatatttgtcaagaatggataccaaccctgcatcagccagactcgcccc
aacaactatgacggcatcctctacaagtactgccaggctggcaccgatctagatgtcaca
aggcattttagcactgatgctaacagtgcttcggagtatatcatgggtgttcctggatca
gacaattggcttggtggcattgctcttgctaatgtgccagattctatccggtcaattaat
ctcatcacaccgcttgattatgcaaacaacagggttggattcaacagttacctagggttc
tccgtcgcgtctgcaaagctcatgagtggcaacgctcagacgtacatcgctggagcaccg
aggtccgaatccatgggcgccgtgctcacactgaagtctgaatcgggtcagagccccagc
cccatataccgtatcgatgcagagaagccgtcctcatcgtttggttatgacgtggctgct
gccgatctgaatggggatggctatgatgacctcatcatcggagcacctcagtacttttac
cgcgacccaagcaacatatatggcggaaagggaggatgtgtttacatttacctcaacaag
gctcacgatggtacatttgataatgtcgaaccaatcaaattgtatggaccgattgattct
ctttttggacaagtcattgcaaatatcggagatataaaccttgatggctttgaagacatt
gccatcggtgcaccctatgagaacaacggtcaaggcgcggtctacatctaccttggtcac
agccaagatggcatcagacaaccggccgctcagaagattaccccctctgatctaccaatg
ggggtcaacggttacccctaccccaacgcatcctttgggtactccatctcgggtggggtc
gatctggatgggaacgggttcccagagatcaccattggtgcctatgaggtccagcagatc
gccgttcttagagggcgtcctgtgatcaacattgaagcttcactcaccctgagtatgact
gagatagaccccaatagcactaactgtgtatactccaacagggattccatatgctttcaa
gtagagctgtgcatgtcctactattgccttgcaccagaattcaatgatcccattaccata
aacttcgacattgaggcggaaggactccgacgcagtaaggttctaaactctcgggtggta
ttcgaggacagcggaattcattctctgaccaagcagacactcgttattacaaacgacgat
gaggcatgcactccaaactacaatgtcgttctgaagcccggctacaccgacatcttccgc
ccaatcccaatcaacctgacatactacattcctgaagaagaagccaacatgccgcagccc
ggtgagcccctccccagcatgaccccctttcctattcttcaggaaaacacccaaacagta
ctgatagaggaggttcatttcagcaaagagtgtgcaaaggatgatgggaagtgtatcact
gatctcgatgtcagtgcttcaatagatgttacaggtactccaccagtactaagagttggc
cagcagctggagatctccatgagcgtgaacatcgccaaccgggaagaggatgcctacgat
gcacggcttgtcatcacctacccatcctaccttggatttatatccctctcatccgattca
ccggcaatcacagcagcttgcaacgcagagccatttgaagaaggagctaatgaaaccagt
atcatctgtgagcttggaaatccgtattcagctggtacaatggactcatttgttgttctt
tatgatgcttctactgtacctcctgatgctgaggaattcaacatcacccttgtagcatcc
tcaatggttgatgatactgctgaggattcaaatcctgataacaacattaaacgcttcacc
attgaagtcgagagtatcaccgacatcctcatcagtggtaaaggaccagagcaactttac
atcagcggtcaggtgatcggagaaagtgcaatgacctactttgaagacatcggattggct
gtcaatcaggaatggacgatattcaacgaaggccctggagccgttaacactgccagagtg
acgatagacttcccctatgaggtagccaatgggaagtggctactctacctgactgagatg
ccatttgttaaagataacaagggatcctgcaacgtcacacccgcagtctatgtcaatgaa
ctgggactgagacccaagaatggaggcgttgcttacactccagtagggccagattcagga
gcagcagaagtaccgcagtcaaggaagagaagacaagccgaagctgaagccgtcagttca
ggtggagaaacaacaacggcaaggaaggacattacactggactgtacacaaggcaatgcc
cagtgcttgaccatctactgtgatcttgaccctctgaccaaagaacccgatatgaaccag
gtggtcatcatcgtccgctcaagaatctggaacagtactttcctagaggattacagcaat
gctcgggtgaagatcattaccgagggttacatagagattgagagcgccccctatattaca
cagaagagagaggacaatgacagatttaagctttcgctaacagttacgccggacatcaag
actctgccgccctctcagcctctccagtggtggattatcgcccttgccgttatcggtggc
ctcatccttctcatcctccttatcatcctcctatggaagtgcggatttttcgcgcgaccc
ggaacgaacggaggtggaccatgtggattcttcgagcgcaagactggatacaagtacgca
acggttacgcagcaacaagcctcgggcaaggccaaaaccgagaagactgcatactacgac
gacatgtattattaa

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