Lytechinus variegatus (green sea urchin): 121426372
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Entry
121426372 CDS
T11173
Name
(RefSeq) partner of Y14 and mago-like
KO
K14294
partner of Y14 and mago
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03013
Nucleocytoplasmic transport
lvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121426372
03015 mRNA surveillance pathway
121426372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121426372
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121426372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
MTR4_beta-barrel
DH_2
DUF3375
Motif
Other DBs
NCBI-GeneID:
121426372
NCBI-ProteinID:
XP_041478591
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All DBs
Position
13:30080871..30084542
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AA seq
207 aa
AA seq
DB search
MVVDGARLAIYVDDDGGEMMASAAKENVETDESGQYLPATQRPDGTWRKPRRVKPGYIPQ
EEVPLYESKGKQWMNSKPRLPPGVYEDPAPAKVEESKALTKAAKKNEKRRQKRKEKQNEV
GQVQNGDVEQLRKGVQEVSVGGGADSAPVVQDPQKRIKNLKKKIRQIEELEAKIASGEVA
QPSKEQLEKIARKEALEDELDSLEDGS
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtagatggcgcccgacttgcaatttatgtggatgatgatggtggagagatgatg
gcgtccgctgcaaaagaaaatgttgaaacggatgaatcaggtcaatacttgccagcaacc
caaaggcccgatggaacatggagaaagccaaggagagtaaaacctggatacataccccaa
gaagaagttcctttgtatgagagcaaaggcaagcaatggatgaacagcaaacccagactt
cctccaggagtctacgaagacccagcacctgcaaaggtagaagaatctaaggcactcacc
aaggccgccaagaagaacgagaaacgtcgccagaaacggaaagagaagcagaacgaggtg
ggacaagtccaaaatggtgatgtggaacagcttaggaagggggtccaggaggtcagtgtg
ggtggaggcgcggattccgcgccggtcgtgcaggatcctcagaagaggattaagaacctt
aagaagaaaatcaggcagattgaggagttggaagccaagatcgccagcggagaagtagca
caaccttccaaagagcagctcgaaaagattgctagaaaagaagcacttgaagatgaactg
gactctctggaagatgggtcatga
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