Lytechinus variegatus (green sea urchin): 121426423
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Entry
121426423 CDS
T11173
Name
(RefSeq) tubulin polyglutamylase TTLL4-like isoform X1
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lvg03037
]
121426423
04812 Cytoskeleton proteins [BR:
lvg04812
]
121426423
Enzymes [BR:
lvg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
121426423
Cilium and associated proteins [BR:
lvg03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
121426423
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
121426423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
121426423
NCBI-ProteinID:
XP_041478656
LinkDB
All DBs
Position
13:29464293..29495354
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AA seq
940 aa
AA seq
DB search
MATATQIEEIRATLQRGLENLALSGNLKPLPLRQQVERPSLRTRPIPPVGAEDPIHTGGN
QIKQPSNKVSGNNRSNLNGSLSDSDHYRPGSARGLSGIVSTPFAKTQNSSLNGAIRQSSL
NTKPPTGTRARPGRPSSGTKRNPPAMSGRTYHSANSQSKLTDTKVSSSIGRGRPLPHPPS
TMSPTRRKEVVSSLSGTGSEQSKKSGKTRKDSLSEDGEEWCDVDENEEEQFDPLMSERMP
GDGASYDDFDEDDGLDGLDDDGMDDGLSCLYDESDTYSTYSMSSTKRGGSSKGGSLSAID
DLLKKTNGIDTSILGSKSKSERVLELLTTGTDDAQPPLSASLFSKVPPTINFVGDNQTVV
SLPWELRKLLKWRMSPITPHVVKNCIARSGFRATKKANEWLGYWGKHMKASGFKSIREYQ
KVNHVPGSFQIGRKDRLWRNLHRMQLHYGKKDYNFFPQTYVLPFDLKLLKRAWEDGGQKQ
KWILKPPASARGIGIRVIHKWSQIPRRRAVIVQRYLAKPYLINGSKFDLRIYVYVSSYDP
LRIYIFSNGLARFATMKYSSSMKSLSNKFMHLTNYSINKKNADFTPNSDSTACQGHKWSL
KALWGFMQKDGVDTNAVWESIKDVVVKTIVCAESQVNSMIKANCKSRFSVHELFGFDIML
DENLRPWILEVNISPSLHSNAELDVQVKGEMIKDLLNISSFMIPDKNDVFTSVLPPNGMT
KVDYSGVIMNKNLYTNHLAKDERAKHAFYTQKHIDEQCKMSILDTLTPDDIRHLVQTEDE
FSRRGGFERAFPSPTSQKYHRFFEAPRYYNILLDEWVRKYHRTQARGLALLEDYCMEGIH
LATNKDDSHTWTPISSVIGTREPRTSSAPSCSLPMPVHPSLQKSSSAQSLPKIRRRGSKM
RSVSSSSSTHSLPGGRALPRPPHSHRIPDGGSSNSTTPPS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgcaacacagatagaagaaatccgagccacccttcagaggggcctggaaaac
cttgccttatcagggaacctcaagccgcttcctttgaggcagcaggtggagcgtccatcc
ttaaggactagacccattccgcctgtaggagccgaggatcccatccacactggaggaaat
cagataaagcagccaagcaacaaagtcagtggaaacaatcgatcaaatctcaatgggtca
ctcagcgactccgaccattatcgtcctggcagtgcaagggggctgtctggtatcgtgtca
accccttttgccaagactcagaacagtagcctgaatggtgcaatacggcaatcgtcccta
aacaccaagcctccgaccgggacacgagcacgtcctggtcgaccctcaagcggaacaaag
cgaaatccgcctgctatgagtggacggacttaccactctgcaaactctcaaagcaagctt
actgatactaaggtgtcaagttctattggccgagggcgacctttgccccatccgccttcg
actatgagtccgactaggaggaaggaggtggtgtcatctttgtcagggactggaagtgaa
caaagcaagaagagtggtaaaactagaaaggacagtctgtctgaagatggagaagaatgg
tgtgatgtggatgagaatgaagaagaacaatttgatcccctcatgagtgagcggatgcct
ggagatggcgcatcttatgatgactttgatgaggatgacggtctagacggtttggatgac
gatggaatggatgatggtctttcttgcctgtatgatgaatccgatacatactccacatat
agcatgtcctccacaaagcgtggaggcagcagtaaaggtgggagtctctctgccatcgac
gacctcctcaagaagacgaacggcatcgatacatcgatcctgggctccaagtccaagagc
gagcgagttcttgagttgctgacgacaggaactgacgatgcccagcctcctctgtcggca
agtctcttcagcaaggttccaccaaccatcaactttgttggggataaccaaacagttgtg
tctttgccttgggagctgaggaaactgttgaaatggaggatgagtccaatcacaccccac
gttgtcaagaactgcatcgcaagatcaggattcagggcaacaaagaaggcaaatgagtgg
cttggctattggggcaagcatatgaaagcttccggcttcaagtctatacgagagtaccaa
aaagtgaaccacgtaccggggtcgtttcaaatcgggcgcaaggaccggctttggcgtaac
ctgcaccgtatgcagctccactacggcaagaaggactacaacttttttccgcagacctac
gtactgccctttgaccttaagctactcaagagggcatgggaggacggaggtcagaagcaa
aagtggatcctaaaaccgcctgcatcagcacgaggtattggcattagggttattcacaag
tggagccagatacctcgtaggagagcagtcatcgtccagcgctatcttgccaagccctac
ctgatcaacgggagtaagtttgatctacgcatctatgtctacgtcagtagctacgacccc
ctccgcatctacatcttttccaatggtcttgccagatttgctaccatgaaatactcctct
tctatgaagagcctgtcaaacaagttcatgcacctgaccaactacagcattaacaagaag
aacgcagacttcactcctaactcggatagcacggcatgccaaggccacaaatggagtttg
aaagcattgtggggctttatgcagaaagatggcgttgacactaatgctgtatgggagtct
atcaaagatgtggttgtcaaaactatagtgtgtgctgagtctcaagtgaacagtatgatc
aaggccaactgtaaaagtcgtttctccgtccatgaactctttggttttgatatcatgctg
gatgagaatctacgcccttggattctagaggttaatatctctccaagtctacattccaac
gcggagcttgatgttcaggtcaaaggtgaaatgatcaaggatctcctcaatataagcagc
tttatgatccctgataagaatgacgtcttcacttcagtgctacctccgaatggtatgaca
aaggtggactacagcggcgtgatcatgaataaaaatctctacaccaatcatctagccaag
gatgaacgggccaagcatgcattctacacacagaagcatatagatgagcaatgtaagatg
tccatccttgacacgctgacccccgatgacatccggcacctggtccagacggaggatgag
ttcagccggcggggcggctttgagcgagccttcccgagtcccacctcccagaagtaccat
cggttctttgaggctcctcgctactacaacatcctccttgatgaatgggtgaggaagtac
cacaggacacaggcgagaggactagctcttttggaagattactgtatggaggggatacat
cttgctactaacaaggacgatagtcatacttggactccaatctcgagcgtgataggaaca
cgggagccacgtacgtccagtgccccatcatgtagcttgcccatgcctgtgcatccttca
ctgcaaaagagttcctcggctcagtctctgcccaagatccgtcgccgtggcagcaagatg
cgatccgtctcatcctccagcagcacccactccctaccaggcggccgcgccctgccacgc
ccgccccactcccatcgcatcccggacggaggcagcagcaacagcaccactccgcccagt
tga
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