Lytechinus variegatus (green sea urchin): 121426560
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Entry
121426560 CDS
T11173
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121426560
04121 Ubiquitin system [BR:
lvg04121
]
121426560
Transcription factors [BR:
lvg03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121426560
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
121426560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
121426560
NCBI-ProteinID:
XP_041478842
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All DBs
Position
13:34690704..34711298
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AA seq
1131 aa
AA seq
DB search
MAAQERSDYEKGGRRGGDRNRNREERTSSSQTRTNQRSQQRSSRNHGPVYDDGYYQPGQE
NQGQGYYRRDQGGIANYYGERRNNGRNHDQDYASQGRAGYGVDYFSYSHYPNEQHFTGDY
RDNQRWHDDRYRPDDRQGVATSGGNQQEDWRWEDSRHPPRGGRGGGRGRGGRRGRQQYGS
KGPDRDAAGEFDNRAEGRRYSDSQEEWGRDGNRGRGRGGRQRGRGKGNRESGRSHHADRE
MDQSRPQARKSRDYPDRDSSGAATQDRKDIDNYVSHIQGTRWQNDRDIGQQDKNRSRSNS
NEDSKNSDRDNPRNRSAPSHRGKGNSQASKLQKGTRKPKISKAGNAETQTGSLIEQLSTG
SYECAICCDRVKAQDRVWSCKTCYVVFHLGCIKKWAKTPAASAEGTDGWQCPACRGVEIK
IPHVYYCFCGKTRDPMWEPGETPHSCGEVCRRKRPTSCPHTCNILCHPGPCPPCPSNVQK
LCNCGKTQQTVRCGTQNEIRCQKKCGKLLNCGRHTCEEICHKGQCSPCEEKIVQECYCGG
ASREVDCQQEVSSTNTKGSYSCLTVCNKLLDCGHHHCESVCHAGECEPCSRDPARVTHCP
CGKTPLSSLCGVERTSCTDPIPTCLNRCEKVFLCGGTDKHICEQTCHSGACPACEKTTNM
KCRCGHRFVDVPCKDIQERSEVICDRKCTRKKHCGRHKCGQICCVDADHLCLQQCGRKLK
CGIHTCEEPCHMGNCPPCLNASFDELTCHCGQEILYPPIPCGTPPPECHQPCNRRHACQH
PVRHHCHSEEKCPPCVELTSKTCIGGHEVRYNIPCHVQGISCGRPCGKPLPCGYHNCLKT
CHTGECDPECKQPCKVIRPDCGHPCGVTCHVGWPCPQITCKSKVTVKCPCGRRVQMMECQ
ASGSDGINKALQKLTVSKLAGKIQTLQRNEDIDISELTGAKGSNKASRLMCDEECSLQER
NKRLAVALQIKNPEMSASNNTTQYGDFLKEQARKHPGFVAAIEKEFAALVVSAQSSKQAS
RSHAFPSMIKNHRRIIHELSEFYGCESESYDEEPKRNVVTTARKNRCFMPNMTLTAMIQR
ELNPRAPLPIPHGSQENKLRSAAKAIKLSTDVVSSSKTKKEKVIDYFDMTS
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccaagaaagatcagactatgaaaaaggagggagacgtggaggagacagaaac
cgcaatagagaagagagaacttcatcaagccaaaccaggacgaatcaaagaagtcagcaa
cgatcgtccaggaatcacgggcctgtgtatgatgatgggtattaccaaccagggcaagaa
aaccaaggacaagggtattatagaagagatcaaggtggtattgctaattattatggagag
aggaggaacaatggaaggaaccatgaccaggattatgccagtcaaggacgagcagggtat
ggtgtagattacttcagttacagccattatccaaatgagcaacatttcactggggattac
agggacaatcaaagatggcatgatgacaggtacagacctgatgatagacagggggtagcg
accagtggaggcaatcagcaggaagattggagatgggaggacagccgacatcctccgaga
ggtggtagagggggtggtagaggaagagggggcagaaggggtagacagcagtatggttca
aagggaccggacagagatgctgcaggagagtttgataatcgcgcagaaggaagacgctat
tctgacagtcaagaagagtggggtagggatggcaataggggcagggggcggggagggaga
caaagaggaagagggaaaggaaaccgagaatcaggaagatctcaccatgcagacagagaa
atggatcaatccagaccacaagcaagaaagtcaagagactacccagacagagactcctcc
ggtgctgccacacaagataggaaagacattgacaattacgtgtcccatatacaaggtacc
cgatggcaaaatgacagggatattggacaacaggataaaaatcgaagcagaagtaactct
aatgaggattcgaaaaacagtgacagagacaacccaaggaacagatctgctccaagtcac
agaggaaaaggaaacagtcaagcaagtaagctgcagaaggggaccagaaaaccaaagata
tctaaggcaggcaatgctgaaactcagacaggatcgctcattgaacaactctctacaggg
tcttatgaatgcgctatttgttgcgaccgagtcaaggcccaagacagagtatggagctgt
aagacttgctatgttgtctttcatctaggatgtatcaagaaatgggctaaaactcctgct
gcttctgctgaaggaacggatggttggcagtgcccagcgtgcaggggtgttgagatcaag
ataccacacgtctattactgcttctgtggaaagaccagggaccccatgtgggaaccgggg
gaaacccctcacagctgcggagaggtgtgtcgtcggaagcgccccacctcctgcccccat
acctgtaacatcctttgccaccctggtccgtgcccgccgtgtccatccaacgtccagaaa
ttatgcaattgtggtaagacccagcaaacagtaagatgtggtactcagaacgagattcga
tgtcaaaagaaatgtggtaaattattgaactgcggtcgacatacttgtgaggagatatgc
cataagggtcagtgtagtccttgtgaagaaaaaattgttcaagaatgttactgtggaggt
gctagcagggaagttgattgtcaacaagaagtgtcatcaaccaacaccaaaggaagctat
tcttgtttgacagtttgcaataaactattagactgtggtcatcaccactgtgagagcgtg
tgccatgctggagagtgtgaaccctgtagccgtgatcctgcccgtgtaacccactgcccc
tgtgggaagacccctctctcctccctgtgtggggtagagaggacctcctgtacagacccc
atccctacctgtcttaataggtgtgagaaagtcttcttgtgcggtggaacagataagcac
atctgtgagcagacttgccactctggcgcgtgtccagcatgtgagaagaccacgaacatg
aaatgccgctgcggacatcgcttcgtcgacgtcccttgcaaggatatacaggaaaggtca
gaggtcatttgcgacaggaagtgtaccaggaagaagcattgtgggagacataaatgtggt
cagatatgttgtgtggatgctgatcacctgtgcttacagcagtgcggacgcaagctcaag
tgtggcattcacacttgtgaggaaccatgtcatatgggaaactgcccaccttgtctcaat
gcaagttttgatgaactcacctgtcactgtggccaggagatcctctacccccctatcccc
tgcggtaccccaccccctgaatgccatcagccatgtaaccgtaggcatgcctgccagcat
cccgtacgtcatcactgccacagcgaggagaagtgcccaccctgtgttgagcttaccagt
aagacatgtatcggaggccatgaggtccgctacaacattccgtgccatgtgcaaggcatc
tcctgtggtcggccatgtggtaagccactgccctgtggttaccacaattgcctgaaaact
tgtcatacgggagaatgtgatcctgaatgcaagcaaccttgtaaagtgatccgtccagat
tgtggtcatccatgtggggtgacctgtcatgttggatggccttgcccacagattacatgt
aaatcaaaggtcactgtgaagtgtccctgcggaagaagagtacagatgatggaatgccag
gctagtggtagtgatggcattaacaaggctttacagaagttgacggtgtctaagctagcg
ggtaagatccagacattacagcgtaatgaagatattgatatcagtgagctcacgggtgcc
aagggatctaacaaggctagcaggcttatgtgtgatgaagagtgttcactacaagaaaga
aataaacgtcttgctgtcgcattgcagatcaagaaccctgaaatgagtgcaagcaataat
acaactcagtatggtgattttctaaaagaacaagcgaggaagcatccaggctttgttgct
gcgatagagaaggagtttgctgcgttggtcgtgtctgctcaaagttccaagcaggcaagt
agaagccatgccttcccatccatgatcaagaaccaccgtcgtatcatccatgagctatct
gaattctacggctgtgaatcagaaagctatgatgaagaaccgaagaggaatgttgttact
acagcaagaaagaaccgatgtttcatgcctaacatgacattgacagcaatgatacagaga
gagctaaatccaagagcaccacttcctatacctcacggcagtcaagaaaataaactcaga
tctgctgcaaaggcaatcaaactttccactgacgtcgtctcatctagtaagacaaagaag
gaaaaggttattgactactttgacatgactagttag
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