Lytechinus variegatus (green sea urchin): 121427218
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Entry
121427218 CDS
T11173
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121427218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvg02000
]
121427218
04147 Exosome [BR:
lvg04147
]
121427218
04090 CD molecules [BR:
lvg04090
]
121427218
Enzymes [BR:
lvg01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
121427218
Transporters [BR:
lvg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121427218
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121427218
CD molecules [BR:
lvg04090
]
Proteins
121427218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_16
AAA
AAA_29
AAA_5
DUF815
nSTAND3
DUF87
G-alpha
AAA_15
ATP-synt_ab
Rad17
SbcC_Walker_B
AAA_7
SR-25
Motif
Other DBs
NCBI-GeneID:
121427218
NCBI-ProteinID:
XP_041479436
LinkDB
All DBs
Position
14:10403111..10437277
Genome browser
AA seq
1399 aa
AA seq
DB search
MFTRNDSAEKRSLLEKHNVADTNQNEGVGSGTKSDTNVVGGSLDAATLGAAAAGGTTSGA
GTGGSAVPTMGPPSDRALAGKSVLVDEASDLVLHSSRLGAAFYGSTEISHDRPQHDRSKV
PRKVPFLSLYRYATGLDWFLLVFGALGALAQGSGWPVLYLFLGIMLDDFITFNTANVTQV
DVDNVTMHTTRTLLQFVPSINNNEEVIVVSDQFELGVEESCIRFALVGLSVMISSYIQTA
SFGLTGERQTNRLRKAFFHSILHQEISWFDFHQTGEITSKLSDDIEKVKSGYGENVGIFL
QFLGQIIAGFILAFTTSWELTLVIMAVLPVLVISSGFMAHVISVMTKQEMKAYSQAGGVA
EEVLSCIRTVTAFGGQKKELERYEKELLTAKAAGIKKGITSGLGIGMSYLFYSCTYALSL
WYGPKMVSEGRITGGDVVTVFFCIWSGSASIGNLTPSIHAIASARGSAVAIYDVIDSEPE
IDKRKDKGVKPKSVEGHIEFRHVRFSYPIRQDVPVLRDLSMKVNSGQRVALVGSSGCGKS
TIVKLLLRFYSHTSGEICIDGNDIRDLNVTWLRENIGVVSQEPTLFNCSIKQNIEYGHEG
VSDAEIVEAAKKANAHQFISSLPKGYDTVVGERGAQLSGGQKQRVAIARALVRNPRILLL
DEATSALDSESEKLVQEALDKAQEGRTTLVIAHRLSTVQNADLIIVIKEGHVAESGNHKE
LMNRESIYRQLVTLQMFKKQDDLISDDDAMSLGRQSSINESVPSSPSSDSVKYSSANDDL
IVSLNGNGKLHMEEEEKIPIKGKKKNKKRKKEKSKTSVPELSYRDILRLNAPECHYIIIG
CIFAAFLGAALPTLAILLTEIIRIFSLPPKEIPAAASFWSLMFIVLGVVRAVSIFISMLM
FSISGELLTLRLRKKAFWAILRQDAAWFDEPHHNTGSLSNVLATDASNVQGATGLRISTL
IHEFVTVLIAVVIAFVYGWQLALFTMCAVPLMTLWGRIQMAMLTGTQKQDSHLLQEASKI
ASEAIENITTVSSLMLEERIYHFYCEKLREPLKKIQKHKFFFAFAVCCSQASVFFLFAAA
FRFGGHLVAIGQMSSDAMFKVIIVITYAGIALGQAAAFMPDFSKAKLSAAKLINLIALKP
PIDNYSTEGLKPNKIDGYIKCNNITFRYPNRPGSTILDNLNLNIKPGQTMALVGESGCGK
STMVALMERFYDPNFGCIQLDGNDLRDLNISWLRSNMSIVSQEPVLFACSIRDNIAYGVE
EDLPQEEVERVAKMANIHDFIVSLPLGYDTLVGEKGAQLSGGQKQRVAIARALARNPRIL
LFDEATSALDTESEQIVQTALDNAMEGRTSIVVAQRLNTIQNSDQIAVIRDGNIVEQGRH
QELVSRKGHYYTLTMGQHS
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccagaaatgacagtgctgagaaacgttcgttattggaaaagcataacgttgca
gatacaaatcagaatgaaggagttggttcaggaaccaaatcggatacgaatgttgtggga
gggtctcttgacgcagcgactttgggtgcggccgccgctggtgggacgacgagtggagcc
ggtacaggaggctcagccgtcccgactatgggacctccgagcgatcgtgctcttgctgga
aaatcggtgctagtagacgaagcttctgatttagttcttcattcttcgagattgggtgct
gcattttatggatcaacagagatatcgcatgatagaccacaacacgacagaagtaaagta
cctcgtaaagttccatttttaagtttgtaccggtatgccacaggactagactggtttctc
ctcgtcttcggtgccctaggtgctctagcgcaaggatcaggatggcccgtcctctatctg
ttcctaggaatcatgctggacgatttcattacgttcaacactgccaatgtaacgcaagtg
gacgttgataatgtaaccatgcacaccacaagaacgttgttacaatttgttcccagtatt
aataataatgaagaggtgattgtagtgtcggatcagtttgagctgggcgtcgaggagagt
tgtatacgcttcgctctggttggtctgtctgtcatgatctcgtcgtatatccagaccgca
tcgtttggactgacgggggagcggcagaccaaccgtctcaggaaagcattctttcattct
atcctgcatcaggaaatcagctggtttgattttcatcagacaggagagatcacctcaaag
ctttcagatgatatagagaaagtgaaatcaggatacggggagaacgtaggaatatttctt
caattcttaggacaaatcattgcaggtttcatactcgcctttactactagttgggagctt
acattagttatcatggccgtccttcccgtcttggttatatccagtggatttatggcgcac
gtgatatcagtaatgaccaaacaagaaatgaaagcatactcacaagccggtggtgtagca
gaggaggtgctctcatgtatacgtacagtgacggcattcgggggccagaagaaggagcta
gaaagatacgagaaagagctgttgacagctaaggcagcgggaatcaagaagggtataaca
agtggattaggcatcgggatgagctacctcttctattcctgtacttacgctctgtcatta
tggtacgggccaaagatggtgagtgaaggtcggatcaccggcggtgacgttgttacagta
ttcttttgtatctggtctggatcagcctcgataggcaacttaacgccatcgatccatgca
atagcatcggctagaggatcggccgtcgccatctatgatgtaatcgacagtgaaccagaa
atagacaagaggaaagacaagggggtgaagcccaagtctgttgaaggtcacatcgagttt
cgtcatgtgaggttcagctatccaatcaggcaagatgtacctgttctccgtgacctttcc
atgaaggtcaacagtggtcagagggtggccttagtcgggtccagtggctgcgggaagtcg
actatagtcaagctgctgctgcgcttctacagccacacatcgggcgagatctgtatagac
ggcaatgacatccgtgacctgaatgtgacctggctaagagagaacatcggtgtggtcagt
caggagcccactctcttcaactgtagtataaagcagaacatcgagtatggtcatgaagga
gtcagtgatgcagagatagtggaagcagccaagaaagcaaacgctcatcagtttatctcg
tcgctacctaagggctatgacactgttgttggagaacgtggagcccagctctctggtggt
cagaagcagagagtagccatcgccagagctctggtcagaaacccaaggattcttctcctt
gatgaagctacctcagccctggacagtgagagtgaaaagctcgtccaggaggctcttgac
aaggcccaggagggaagaacaacccttgtgattgcccatcgtctgtcaacggttcagaat
gcagacctcatcattgtcatcaaggaaggccacgtagccgaatccggaaaccacaaggag
cttatgaacagagagagtatctaccgtcagcttgtcacactacagatgttcaaaaagcaa
gatgacctcattagtgacgacgatgcaatgagtcttggtcgacaatcctctatcaacgaa
tctgtgccatcatccccatcgtcagactcggtcaagtacagcagtgctaacgatgatctc
attgtatcgctgaacggcaatggtaaactccatatggaagaagaagagaaaatcccaatc
aaaggcaagaaaaagaacaagaaacgaaagaaggagaaatccaaaacaagcgtgcctgag
ctgtcttatcgtgacatcttgagactgaatgctcctgaatgccactacatcatcatcggc
tgtatctttgcagcgtttcttggtgcagccctacctaccttggctattctactaacagag
atcatcagaatattcagtttacccccgaaggagattccagccgcagcgtccttctggtcc
ttgatgttcattgtgttgggtgtggtgagagctgtcagtatcttcatcagtatgctgatg
ttcagcatctctggagaactcctaaccctgaggctcagaaagaaggcattctgggcgatc
cttagacaagatgctgcttggtttgatgaaccacaccataacacaggttctttgtctaac
gttcttgctactgatgcttccaatgttcaaggggctactggtctccgcatcagtaccctc
atccacgagtttgtcacagtcctcatcgccgtcgtcatcgccttcgtgtatggatggcag
ctggctctgttcacaatgtgcgccgttcctctcatgacgctatggggacgcattcagatg
gcaatgttgacaggcacccagaaacaagactcccatctactccaagaagcttctaagatt
gcaagtgaagcgattgaaaatatcacaacagtatcatcccttatgttggaagaaaggata
taccatttctactgtgagaagcttcgtgaaccgctcaagaaaatccagaagcacaagttc
ttctttgcctttgccgtatgttgctcccaggcatctgttttcttcctctttgctgcggcc
tttagatttggtggacatctggtggctattggtcaaatgtcttcagatgccatgttcaag
gttatcattgtaatcacctatgcaggcattgcattaggtcaggcagctgcgttcatgcca
gacttcagcaaggctaaactctcggcagctaagctcatcaacctgatagctctcaaacca
cccattgacaactactcaacagagggacttaaaccaaataagatcgatggctacatcaag
tgcaataacataaccttcaggtatccaaaccgtccaggaagtaccatcttagacaatctt
aacctgaatatcaaacctggccagaccatggcgctggtcggagagagcggttgcgggaag
agcaccatggtagcgctcatggagcgcttctacgatccaaactttggatgcatccaactt
gacggtaatgacctgcgtgacctgaacatcagctggcttcggtctaacatgagtatcgtc
agccaggagccggtgctgtttgcgtgttctatcagggataacatcgcctatggtgtggag
gaggaccttcctcaggaggaagtggagagagtggctaagatggctaatatccacgatttc
atcgtctctctgcctttgggttatgacacacttgtaggagagaaaggagctcagctgtct
ggcggtcagaagcagagagtcgctatagccagagctcttgctaggaatcctcgtatcctt
ctcttcgatgaagccacgtcagcactggacacagaaagcgaacagatcgtccagacagca
ttagacaatgccatggaaggacgaacctcgatcgtcgtagcccagcgtctgaacaccatc
cagaactcggaccaaatcgctgtcatcagggacggaaacatcgtagagcaagggcgccac
caagagttggtttcgagaaagggccactattacacactcaccatgggccaacatagctaa
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