Lytechinus variegatus (green sea urchin): 121427230
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Entry
121427230 CDS
T11173
Name
(RefSeq) coatomer subunit beta'-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121427230
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvg04147
]
121427230
Membrane trafficking [BR:
lvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121427230
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121427230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
121427230
NCBI-ProteinID:
XP_041479465
LinkDB
All DBs
Position
14:23593522..23616617
Genome browser
AA seq
919 aa
AA seq
DB search
MPLRLDIKRKLSARSDRVKCVDLHPSEPWMLVSLYNGNVHVWNHESQTLVKSFEVCDLPV
RAARFVARKNWVITGSDDMQVKVFNYNTLERVHMFEAHSDYIRSIGVHPIQPYILTSSDD
MLIKLWDWDRKWQCTQVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSSTPNFT
LEGHEKGVNCVDYYNGGDKPYLVSGADDKLVKIWDYQNKTCVQTLEGHAQNISCVSYHPE
LPIIMTGSEDGTVRIWHANTYRLETTLNYGLERVWTVANMKGSNNVALGYDEGSIIIKLG
REEPAMSMDSSGKIMWAKHSEIQQANLKAMTDYEIKDGERLPLGIKDMGSCDVYPQTLAH
NPNGRFVVVCGDGEYIIYTAMALRNKSYGSALEFVWSHDSSEYAIRESSTSVKLFKNFKE
KKSFKPDFGAEGIFGGSLLGVRSSSGLAFYDWDSTELIRRIEITPRHLFWSENGELLCIA
TDESYFILRYSPDAVAKAQETNEGVTEDGIEEAFEVVGEIEEIVKTGCWVGDCFIYTNSV
NRLNYYVGGEIVTISHLDRTMYLLGYIAKDNRLYLGDKELNVVSFSLLLSVLEYQTAVMR
RDFNTADKVLPTVPREHRTRVAHFLEKQGFKSQALAVSCDTEHKFDLALQLGELKTAYSL
AVESESEQKWKQLAELATSKCEFELAQECLHKAQDYGGLLLLASCSGNASMVDKLASTAA
ENDKNNVAFVGYFIRGETEKCLELLCRSGRHPEAAFFARTYLPSKISEVVQAWKESLKKV
NTKAADALADPTQYENLFTGLKETAQAEEFLKTRRTTIPANKFPSVPSTSERDVMEEMQQ
AIASGAFTVGQDQEPMQEPEAAPPQETPASAPSGSTKPAPAEARPRTDTDDLDFDFDNLE
IDDNLDTSEVNLDEDLLED
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttagattggatataaagcgaaagctttcagcacggtctgaccgtgtaaagtgc
gttgaccttcatccatctgagccgtggatgcttgtcagtttgtacaatggtaacgtacat
gtatggaaccatgaatcacagacccttgtcaagtcatttgaggtctgtgatctaccggtc
agagctgccaggtttgtcgctcgcaagaactgggtcatcactggatcagatgacatgcaa
gtgaaagtattcaactataacacccttgagagagttcatatgtttgaagctcactcagat
tacatcaggagtataggtgtacacccgatccagccatacattctaaccagtagcgatgac
atgcttatcaagctgtgggactgggatcgtaagtggcagtgtactcaagtgtttgaagga
cacacccactatgtgatgcagatagtatttaatcccaaggataacaacacattcgccagc
gcctcactggacagaacagtcaaggtttggcaacttggctccagcacacctaacttcacc
cttgaaggtcatgagaagggcgtaaattgtgtagactactacaacggcggcgacaaacct
taccttgtctcaggtgctgatgataaactagtcaagatctgggattatcagaacaaaacc
tgtgtacagaccttggaaggccatgctcagaatatttcttgtgtaagctatcatccggag
cttcctatcatcatgacaggatcagaagatggtactgtaagaatctggcatgctaacacc
tacagattagaaaccacactgaactatggtctagagagagtatggaccgttgcgaacatg
aaaggatccaacaatgttgctcttggatatgatgaaggcagcatcatcatcaagcttggg
cgagaagaaccagcaatgtccatggattctagcggaaagatcatgtgggcaaaacactct
gaaatacagcaagctaatctgaaagccatgactgattatgagatcaaggatggtgagaga
ctgccactaggaatcaaggatatgggaagttgtgatgtctaccctcagaccctcgctcat
aatccaaatggaaggtttgtggtagtatgcggggatggagaatacatcatctacactgct
atggccctcaggaacaagagctacggctccgccctggaattcgtctggtcacatgattcc
tcagaatatgccatcagggagagcagtacttctgttaaacttttcaagaatttcaaggag
aagaaatcattcaaaccagactttggagcagaaggtatctttgggggttcattactcggc
gttcgttctagcagtgggcttgctttctatgactgggattcaacagagcttattaggaga
atagagattacacctcgacatctcttctggtctgagaatggtgagttgctgtgcatagca
acagacgagtcttacttcatccttagatacagtcctgatgcagttgccaaggcacaggaa
acaaacgaaggagtaacagaggatggcattgaagaggcttttgaggttgttggtgagatt
gaggagattgttaagacaggttgttgggtcggtgattgcttcatctacaccaactctgtt
aacagactcaattactatgtcggtggagaaatcgtcacaatctcacatcttgacaggacc
atgtacctgttaggatatattgcaaaggacaatcgtctctacctcggggacaaggaactc
aatgttgttagcttctctctcctgctgtctgtcctggagtaccagacggctgtcatgaga
agagacttcaacacagccgacaaggtccttcccacagtaccaagagaacatcggacaagg
gtggcgcacttcctagagaaacagggtttcaagtctcaagccttggccgtgtcgtgtgat
acagaacacaaatttgaccttgcccttcaactaggtgaattaaaaacagcatatagtctg
gctgttgagtctgagtctgaacagaaatggaagcagctagccgagcttgccacgtctaag
tgtgagtttgaactggcccaggagtgccttcacaaggcccaggactacggaggtctcctc
ctcctagccagctgctccggcaatgctagtatggttgataagctggcctccacggcagca
gagaatgacaagaacaatgtggctttcgttggctacttcatcaggggagagactgagaaa
tgtctggagcttctttgtcggtcaggacgacatcctgaagcagctttctttgccagaaca
taccttccaagcaaaatatcagaggttgtccaagcatggaaagagagtctcaagaaggtc
aacaccaaggctgctgatgccttagcagaccctacacagtacgagaatctcttcacagga
ctcaaggagactgcacaggctgaagagttcctcaagacccgacggaccaccatacctgcc
aacaagttcccttccgtaccgagtacaagtgaaagagatgtgatggaagagatgcagcaa
gctattgctagtggagcattcactgtgggccaagatcaggagcctatgcaggagcctgaa
gcagctcctccccaggagactcctgcatcagctccttcaggatccaccaagccagctcca
gccgaggcacgcccaaggacggacaccgacgatctcgactttgacttcgacaacctggag
atcgatgacaacttagatacgtcagaagtcaacctagatgaagatttattagaagattag
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integrated database retrieval system
