Lytechinus variegatus (green sea urchin): 121427234
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Entry
121427234 CDS
T11173
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121427234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121427234
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvg04147
]
121427234
Membrane trafficking [BR:
lvg04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121427234
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121427234
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121427234
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_5
Ank_3
BAR
PH_11
ANK_LRRK2
PH_21
Perilipin_2
Motif
Other DBs
NCBI-GeneID:
121427234
NCBI-ProteinID:
XP_041479471
LinkDB
All DBs
Position
14:complement(26991615..27057979)
Genome browser
AA seq
789 aa
AA seq
DB search
MKPKIKFEECLRDSPKFRSALEDAEADISDLEHKLEKLVKLCNIMVDAGKAYNNAFGSFI
TGTNEIMKYFKGDDTVQDYLLKFMGAMNETRNYQAILEDQALRAVSKSLSTFIKGDLKKV
KEAKRLFYKISDDYDNALHKNAQTVRTKPLEAEETLNVLTATRSAFGHTALDYVFQINIV
QSKERHEVLNTLLSFMHAQFTFFHQGYDLLKDLNPTFKELGNKLQGMTTKASTEKRKMED
RHSLVQEMDTLWNMTFDPSKTPIMEGYLYKRATNAFKTWHRRWFTIKDNQLIYQKRSKGQ
VSIASDDLRLCNVKPLDEIDRRFCFEVVSPGKTTVLQADNDNIRHAWIQALQAGINSAFN
SPIAKTPPAALEREVSAFDNASPSPVSIQLSNESKKEGIRAEIMAMPGNDKCCDCKADNP
KWASINLGITLCIECSGVHRSLGVHISKVRSLLLDQWEPETYQVMLKLGNTIINRIYEAD
LSDLSLVHPSPGCNSNVRESWIKAKYVQHQFLAKRLTKPIVKRRRKRRGKRQSQSHLASA
DKMSLGSRSSDGATGDDEEGGDVRNGMGKAGVSNDSGLGGSIDKIPPDLNHDEGLVTSDS
SEGELEVPTSPLEGDPITAQELLYLGACNNSEQVMMNAIAHLADINKPDHNDDMRTALHK
AVSLGSLTSVESLLLNGAKVNIPDANGRTILHLATMLGNTGLVCLCLKRGADQNAKDSDG
QNPLQIAITTTNADIVTLLRLSKLNEEMKDAELGNPNDETFQDVFQDFTNLAQYDPQKLN
RNRSSDDMV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaagataaaattcgaagaatgtctgcgagattcaccgaaattcaggtcagct
cttgaagatgcagaggcagatatctcggatctggagcataaacttgaaaagctggtgaag
ctgtgcaatatcatggtagatgcaggaaaggcatacaacaatgctttcgggtcttttata
acaggtactaatgagattatgaagtacttcaaaggagacgataccgtacaggactacctc
ctgaaattcatgggtgccatgaatgagaccagaaattaccaagcgatacttgaggatcag
gcactaagagccgtctctaaaagtctgagcactttcattaaaggagacttgaagaaggtc
aaggaagcaaagcgattgttttacaagatcagtgacgactacgacaatgccttacacaag
aatgcccagactgtccggactaaaccgctggaagcggaagaaactctcaacgtcctcact
gcaactcgttccgcctttggtcacactgcgctcgattatgtgtttcagatcaacattgtc
cagtccaaagagagacatgaagttcttaacacgttgctgtccttcatgcatgcccagttc
acattctttcatcaaggttatgatcttctaaaggatctcaacccaaccttcaaggaacta
ggcaacaagcttcaaggaatgaccaccaaggcaagtactgagaagagaaaaatggaagac
agacattcactggtccaagaaatggataccttgtggaacatgacctttgacccgagcaag
acccctattatggaaggttacctgtacaaacgggcaacgaatgcattcaaaacatggcac
agacgatggtttacaataaaggacaaccaactgatatatcagaaaagatctaagggtcaa
gtgagcatagcttccgatgatcttagactgtgcaatgtaaaaccgttagatgagatagat
agacgattctgctttgaagtggtctcacctggcaaaaccacggtgcttcaagccgataat
gacaacatccgtcacgcctggattcaggcgttacaagccggtattaactcggctttcaac
agtcctatcgctaagactccacctgctgccttagagagagaggtcagtgcttttgataat
gcttcaccttctcctgtcagtatccaactctccaatgagtctaagaaagaagggattcga
gctgagatcatggctatgccaggaaatgacaaatgctgcgactgtaaagctgacaatcct
aaatgggcaagcatcaatcttggtatcacattgtgtatagaatgctctggtgtccacaga
agtcttggtgtccacatatcaaaggtcaggtcattgctacttgaccaatgggaaccagaa
acatatcaggtgatgttgaaacttggtaacacaataataaacaggatttatgaagctgat
ctgagtgatctatcattggtccacccttcaccaggatgtaacagcaatgttcgtgagagc
tggatcaaagcaaagtatgtccagcaccagtttcttgccaagaggttaacgaagcccatc
gtgaagaggagaagaaaaagaagaggaaagagacagagtcagagtcatctggcatcagca
gataagatgtcacttggaagtaggagcagtgatggtgcgacgggcgatgatgaagagggt
ggtgatgtgaggaatggaatgggaaaagcaggcgtgtcaaatgacagtggtcttggagga
agcatagacaagataccacctgatttaaaccatgatgaaggactcgtaacaagtgacagc
tcagaaggagaattagaagtacctacttcacccttagaaggggatcctatcaccgcacaa
gaactgctctatctgggagcctgtaataacagtgaacaggtgatgatgaatgcaatagca
cacttggcagatattaacaaacctgatcataatgatgatatgagaacggcattacataaa
gctgtatcattgggaagtttaacttcagtggaatcccttctactgaacggtgccaaagtg
aacatacctgatgcaaatggaaggacaatactccacttagctaccatgctgggaaataca
gggctggtatgtttgtgtttaaagagaggtgcagatcaaaatgcaaaagacagtgatgga
cagaaccctctgcagatcgccatcacaacaaccaatgcagatatagtcacattgctccgg
ttatctaaactgaatgaggagatgaaggacgctgagctcggcaatcccaacgatgaaacg
ttccaagatgtcttccaagatttcacaaaccttgcccaatacgaccctcagaaactcaat
cggaatagatcaagcgatgatatggtatag
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