Lytechinus variegatus (green sea urchin): 121427255
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Entry
121427255 CDS
T11173
Name
(RefSeq) E3 ubiquitin-protein ligase Trim36-like isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121427255
04121 Ubiquitin system [BR:
lvg04121
]
121427255
Enzymes [BR:
lvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121427255
Membrane trafficking [BR:
lvg04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121427255
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121427255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
SPRY
zf-C3HC4_3
fn3
zf-C3HC4
zf-C3HC4_2
ANCHR-like_BBOX
RING_XB3-XBAT31
zf-RING_2
Apolipoprotein
Mce4_CUP1
DNA_topoisoIV
Hydro_N_hd
COS
FapA
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
121427255
NCBI-ProteinID:
XP_041479511
LinkDB
All DBs
Position
14:complement(6495715..6516012)
Genome browser
AA seq
922 aa
AA seq
DB search
MEDIGFTDEDVLEYIAEENVDDDEGDDEEGAQSGFFKLDLGAFIVSKTWCQDDIVNRLST
MASNMEHLERELICPICNDYFTTPLLLPCNHNVCHRCAKAQLTGNSGRCSFHASSESLQS
VDTNHETTTPTSSRPSSAAANRKSRKLSLTSLSSTPTSPLDTPGGGFNTANRSSMRRSFR
ERKSVTGSGPITPRDKVGTKSKKLGTSGLGSRPESPISESSRPDSPRGDAMTGPLETPRG
RKGSTGSVTSLGSRSDSFSGTLGMRGRTPSTGKLNGPTATSIHCPTCDEEVHLGDKGING
LFRNFALEVVVDRYKLAAKKAASIPCGSCKKKPPEDAAKSCLDCKSPYCTECFAIYHPWG
TPRAQHVCIGPTYNYRPKTLMCNDHHGEKITMYCEGCHKPICHRCKFSGSHADHKVSIIE
RKYAAMKEKMEQTISAIAKRRQNITDQVEKLERISSSIEESAGAMQKALAEALELLQSTL
SERHTDLTQRASEEVTQRTQNIRKVLDTYKDVLQGCSVADLASELLKETDKAMFVQAAKP
LVGRLVQTAKSLKQTEEMCENYETFGDFQLDSTCALKSLRELDFIKAPGQPVLQPKASNP
HACLEWIPSTDGGAVDSYTVEYLKLESSKQAEEGLERPTSLPLNNGNGDQGASESDGEWT
KVSDLTDCRYEPRNLEMDTSYKFRVKAFNPAGTKSSDCILLKTPPAPVLPFKWTQCQSSV
PHISSKVRKDGQEVLVSPTSTMFSSNSGSFPTSPIALEPVHFVGDKKLTSGKHYWEVQVD
KATLAIHVGIASERMAERFSRSSDGDAIADRDSGHDSCDELDDEVSLQDPTVFVTHCMGK
LTLPSPTSSPRKTSNKASSKPSSPRTCSIQSNVVGVLLDAEAGRVSFYDGSSKECLFSRK
IKVSGGIQPALTIVGSGTVRMN
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggaagatattggatttactgatgaagatgtgttggagtatatagcggaggagaatgta
gatgatgatgaaggggatgatgaggagggggctcagtcgggatttttcaagttggatctt
ggtgccttcattgtttcgaaaacatggtgtcaagatgatattgtaaaccgtctttccacc
atggctagtaacatggagcacctcgagcgagagctcatctgtccgatctgcaatgattac
ttcaccacaccactccttcttccatgcaatcacaatgtgtgccaccgatgtgccaaggca
cagctcaccggtaactccggacgttgcagcttccacgcctccagcgaaagtctccagtca
gtcgataccaaccatgagacgaccacgcccacttcctcgagaccgagcagcgcagcagcc
aatcgcaagtcccgaaagttgtcgctgacgtcactatcgagcacgcccacctctccgttg
gacacgcccggcggaggcttcaacacggcgaacaggagttcgatgaggagatcgttccgg
gaaaggaagagtgtgacgggttctggtccgattacgccaagggataaagttggcacgaag
tccaaaaagcttggcacatcaggattaggatcgaggccagaatcgcctatttctgaatcc
tctcgtcccgattcacccagaggtgatgcgatgactggtccacttgagactccaagggga
cgaaaaggatccacgggtagcgttaccagtctgggaagcagatcagattctttcagtgga
acgcttggaatgagaggaagaacaccatcgacgggaaaattgaatggcccgacggcaaca
tcgatccactgcccgacctgcgatgaggaagttcatctgggagataaaggcatcaatggt
ctcttcaggaacttcgccttggaggtcgttgtcgacaggtataagttggcagccaagaag
gccgctagtatcccctgtggctcttgcaagaaaaaaccgcctgaggatgcagccaaaagc
tgtctagattgtaagtcaccctactgtacggagtgcttcgccatttaccatccctggggg
acaccacgagctcaacatgtctgtattggtcccacctataactacagaccaaagaccctg
atgtgcaatgatcaccatggagagaagatcaccatgtactgtgagggatgtcataaacca
atctgtcataggtgcaagttcagcgggtcacatgctgatcacaaagtttccatcatagaa
agaaaatacgctgcaatgaaggaaaagatggaacagacgatcagtgccattgcaaaacgg
cggcaaaacatcacggatcaggtggagaaacttgaaaggatttcatcttctattgaagag
agtgcaggcgcaatgcagaaggcgttggctgaagccttggaactgttacaatcaacgctc
agcgaaagacacactgacttgacgcagagggcgtctgaggaggtgacccaaaggacacag
aacatccgcaaagtattggacacctacaaggatgtcctccagggatgcagcgttgccgac
ctggcttctgaactgctgaaggaaactgacaaggctatgtttgtacaagctgccaaacct
ctcgttggaagattggtgcaaacggccaagtcgctcaagcaaacagaggagatgtgtgaa
aattacgagacatttggtgacttccagctagactcgacatgtgctctcaaatctcttcgg
gaacttgatttcatcaaagctccgggacaaccagtattacagccaaaagcttccaatccc
cacgcctgccttgaatggataccatcgaccgacgggggcgctgttgattcttatacagtg
gagtacctgaagctggaaagcagcaaacaggcggaagaaggtttagaaagaccgaccagt
ctcccgctcaacaatggcaatggcgaccaaggcgcgtctgaaagtgatggcgagtggacg
aaggtttcggacctgacagactgccggtatgagccaaggaatctagagatggacacctcc
tacaagttcagagtgaaggcttttaatccggctggtaccaagtccagtgattgcattctc
ttgaaaacaccaccggctccagtgctaccttttaaatggacccaatgccagtcaagcgtg
cctcatatttcatcaaaggttcggaaagatggccaagaggtcttggtgtcgccaacatca
accatgttttcatcgaactccggctcattcccgacctcgcccattgcactggaacccgtc
cactttgtaggggacaagaaactaacgtcgggaaagcactactgggaggtccaagttgat
aaggccactctcgctatccacgtcggtatcgcaagtgagcgcatggcggagcgcttcagc
cgcagcagtgacggcgacgccattgcagatcgcgacagcggacacgacagttgcgacgaa
ctcgacgacgaggtctcgctgcaagatcccacggttttcgtcacacattgcatgggcaaa
ttgacgctgccgtcaccgacgtcatcaccgcgaaagacctcgaataaggcatcgtcgaaa
ccttcgagtccgaggacatgtagtattcaatctaatgttgttggtgtgctcttagacgct
gaagcaggtagagtgtccttctacgatggttcttcaaaggaatgtcttttctctaggaaa
atcaaggtatctggtgggatccaaccagctctaacaatcgtcgggtcaggaacagttaga
atgaattag
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