Lytechinus variegatus (green sea urchin): 121427368
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Entry
121427368 CDS
T11173
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121427368
03012 Translation factors [BR:
lvg03012
]
121427368
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121427368
mRNA cycle factors
Stress granule specific factors
121427368
Translation factors [BR:
lvg03012
]
Eukaryotic type
Initiation factors
eIF-4
121427368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
eIF_4G1
HTH_WhiA
Motif
Other DBs
NCBI-GeneID:
121427368
NCBI-ProteinID:
XP_041479659
LinkDB
All DBs
Position
14:complement(21454748..21506732)
Genome browser
AA seq
1741 aa
AA seq
DB search
MSYSNPPKGKGVYFQQQPHPQRHRYPQQRADEIANRPRAFIQQQAPRPQHPVPSQSPRIP
SPSVSPVAVNTLTHDMNKQGAPSRPAMAASPQQGILPNQPNPSAPPMMNMGQVRFQAPRQ
ALPRAYQPQIPQQVYSVRHQNQAQMQGMQQHPQGGGPASQQGANQAQMMQSSAASGQYMQ
QQGAPQFIMTGAMTGPMNIVPQPQITHRPYQQTYPTVYQAQTTPPYYSSPPQPGVWLNPA
PASAPRQAFTPQPPVSRSNSTRERKLIRIQDPNTNQDITDVLLRDTSGSSSPHSGRSSAN
VTPPVSTSSEDAKRIQAAFASKVAMVATAGDPQSDLPPPHRVPPQSAPQQPQTQLPQQQQ
PPPQQVPQPIPQPVPQQPPMQPGQPPVVVMPGGQTVPVVPGGNFPVAAPGAAPVAAQLPS
QPVEPAVAEGAPSTVVAATPVAEAVQPPRPVPQAAAMPAPLPVQQPAQVQPVQGTPAQHV
PPEAIPAAVQPPVPVVTPAGPPANVQAAPVQEATAAAPPPPSKHELASANTASTIGQASP
SEQEVAAPDGAAVPPVVPQTVAPTTETNPKQVDDDANQISANNQAVQQSTPASVVPQPES
KEAASSLPESKDAKKKSQKKRFQELDKKTTKGSDEFDAYKTDDVQEPTSSQENLGKEGEL
EPEAKASKEPVEGTVQDVTPSEQPKETTTQPQEDKKSTEKTDDTPPSDVAKRKSEKEPSV
VSEKESEQTVVPDTSAPTKVEKEEEKSDRIDPSEDRENVNEADNVESENSKNKEGKPNPK
DNKMQLKYAYREDQWSPNNPEGKKQYDRDFLLQFQKGCTDKPDGLPNIPDIVLDKAVVMP
LNLNQQQGGNQKSSDFMPHFMKSPRVQGKQPNYPTGQGRRSSREPLKVIQRQKDTAETKL
STSDKAWKPGHKRAPEEEKDGEDVKTQELFRNFTSILNKLTPQMFNRLTEKALQLPIDTE
ERLKGVIQLVFEKAISEPNFSTAYAHMCQRLSQLKVQSSTNPGQQVQFRPILLHNCQQEF
EKEKQTEIDEVQRRKEISQLPAKEQEAQLELLEEKLYKAKRRTMGNIRFIGELFKLNILT
ENIMHGCIMKLLKAKDDDSLECLCNLMSTIGKALDHEKAKNRIDQYFNKIDKIIASQANQ
PRIRFLMHDLVDLRKDNWVPRRQENKPTTIDALHKEWHVNEAKKAVELKGYNGPSRSREQ
APPPRTVTPQADDGWNTVPTSNKTRTPYDPSKLKLTRMTNVDENIQLGPGGRGFNMWQRG
SIGAGSKNKSTTESASSSSQEEQAPSQANRFSMLSEDAKRPMSRGGSGGYSSRDSRGRGQ
SPMSKRSRERDRDRDREREKEAAIAEVQRISRPARPEPAEPRGSKEIAAPVKPEKKEEPT
MPDSKVKHTSVATVEEFLNLKDFAEATRCVSELPSKQRHIFVQSAVDNVIEKKQDMRESV
GVLFHSLLNSNLVTKEQYLTGIKDMVEFAEDMAIDIPKIYEYLGEIMGATVIERAEYLEL
QATAVMPLKEFQTAGVLLAEVLRTASRRIGASAVCHIWQQSGLRWETFLPDGENVQEFVQ
KKGVDFTLDGASATDNGLNSVQGDWVATFNRGLTNLLNEKPDNNKIFDWIKSNVTDTHKQ
HPEFIRALVTLICQHAAEGEGQNCRIDPEILKQRGPILQRYIDSKRPLELQALYAVQALN
HSLHSPPGLLRILFDVLYDEDVVSEDAFYDWKKSEDPKESAGKGVALKSVTSFFTWLAEA
D
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgagctattctaatccaccgaaggggaaaggcgtgtattttcagcaacaaccccatcca
cagagacatcgctatcctcaacagagggcagacgaaatagcgaatcgtcctcgagcgttt
atacaacaacaagcaccacggcctcagcaccctgtaccatcgcagagcccacgtattcca
tccccttctgtcagcccagtggctgtcaacacactcacccatgacatgaacaagcaaggg
gcaccgagccggcctgcgatggccgcgtccccccagcaggggatcttgccaaaccagccc
aaccccagcgcaccccccatgatgaatatgggccaagtgcgcttccaggcaccacggcaa
gcactgccgcgagcttatcagccacaaatcccgcagcaggtgtattcagtccgtcatcag
aaccaagcgcagatgcaggggatgcagcagcaccctcaaggtggtgggccagcctcccag
caaggtgccaaccaagcacagatgatgcagtctagtgcagcgtcgggacaatacatgcag
cagcagggggcacctcagtttatcatgacgggggcaatgacgggcccgatgaatattgta
ccacagccacagattactcacaggccatatcagcaaacttatccgacggtgtaccaagca
cagaccacgccaccgtattacagctcccctccacaaccaggtgtttggttgaatccggca
ccagcttcagctccaaggcaggcgtttaccccacagcctcctgtctcgagatcgaatagt
acgagggaaaggaagcttatacgcatccaagaccctaatacaaaccaagatatcacagat
gtcctcctgcgtgatacgtcagggtctagctctccccattcgggtcgttcaagtgcaaat
gtcactcccccagtgtccacgtcaagtgaggatgcaaagagaatacaggccgcctttgca
tccaaagttgcgatggtcgctaccgccggtgacccacaatccgacctaccaccaccccac
agagtacctccacagtccgcgcctcaacagcctcaaacccagctgcctcaacaacagcaa
ccacctcctcaacaggtaccacaacctataccacaacctgtaccacagcaaccaccaatg
cagccagggcaaccgccagttgtagtcatgcctggtgggcagaccgttcctgtggtacct
ggaggaaacttcccagtggcggctccaggtgccgcacccgtggccgctcagcttcctagc
cagccagtggagccagcagtagcggaaggagcccccagtacagttgtcgcagcaacgcct
gtggcagaggcagtccaaccgcccaggcctgtcccacaagcagcagcgatgccagcacct
ctaccggttcaacaacctgcgcaggtgcaaccggttcaggggacgcctgcccagcatgta
ccccctgaagcaatacctgcagctgtccaacctccagtaccagttgttacccctgcaggt
cccccagccaatgtgcaagctgctcctgtccaagaagctacagcagcagcaccaccacca
ccctctaaacatgaacttgccagtgcaaacactgcatccactataggacaagcatcccca
tcagagcaagaggttgctgctcctgatggtgcggcagtgcctccagttgtaccacaaact
gtggcaccaacgacggaaacaaatcccaagcaagtggacgatgacgccaaccaaataagt
gcaaataaccaagcagtgcaacagtcaacgccggcatccgtagttcctcagccagagagc
aaagaggctgcttcatcccttccagaaagtaaagacgctaagaagaaaagtcaaaagaag
agatttcaagaactggacaaaaagacaacaaaaggctcagatgaatttgatgcttataag
acagatgatgtccaggaacccacctcaagtcaggagaaccttggaaaggaaggcgaactg
gagccggaagcgaaagcctcgaaggaaccagtcgaaggaaccgtgcaagatgttacccca
tcagagcaacctaaggaaacgacaactcagccacaagaggacaagaaatctacagaaaag
actgatgatacgcctcctagtgatgtggccaagaggaaaagtgagaaagaaccctctgta
gttagtgaaaaggaatcggagcaaacggtggttcctgacacgagtgccccaaccaaggtg
gagaaggaggaggagaaatcggatcgcatcgatccctcagaggatagagagaatgtgaat
gaggcggacaatgtggagtctgagaactcgaaaaacaaagaaggaaagccaaaccccaag
gacaataagatgcaattgaagtatgcctacagggaagaccagtggagccctaacaatcca
gagggcaagaaacaatacgaccgtgactttctcctccagtttcagaagggatgcacggac
aaacctgatgggcttccaaacattcctgacattgttctggacaaagccgttgttatgcca
ttgaacctgaaccaacagcaaggcggaaaccagaagagctcagacttcatgccacacttt
atgaagtcaccaagagtacagggcaagcaacccaactatccaaccggtcagggtaggagg
tcatctcgagagcccctcaaggtgatccaaagacaaaaagatacagccgagactaaactc
tcgacatcagataaggcttggaaacctggacacaagagggcgccagaagaagaaaaggat
ggagaggatgtcaagacacaggaattgttccgcaacttcacaagtattctgaataagctg
actcctcagatgtttaacagactgactgagaaagcactacaactacccattgatacagag
gagcggctaaaaggcgttatccagttagtgtttgaaaaggcaattagcgagcccaacttt
agcacggcctatgcccacatgtgccagagactgtcccaactcaaggtgcaatcatcgaca
aacccaggacagcaggttcagttccgtccaatcctactacacaactgccagcaagagttt
gagaaggagaagcagacagagattgacgaggtccagaggagaaaagaaatctctcagctt
cctgccaaagaacaagaagctcagctagaactcctggaggagaagctttacaaggctaag
aggagaacgatgggcaacatccgcttcatcggtgagctcttcaagctgaatatcctgacc
gagaacatcatgcacggctgtatcatgaagctgctcaaagcgaaagacgacgactcgtta
gaatgtctatgtaatctcatgtccaccattggcaaggctcttgaccatgaaaaggccaag
aatcggattgaccagtactttaacaagattgacaagatcattgcttctcaggccaatcaa
cctaggatacgatttctaatgcatgatcttgtagatttaaggaaggataactgggtacca
aggaggcaggagaataaaccgactaccatcgacgccctccataaagaatggcacgtcaac
gaggctaagaaagctgtagagctgaagggttataatggtccgagcaggagcagggagcag
gctccccctccacgtacggtcacgccccaggccgatgacggctggaacacagtaccaact
tccaacaagacgagaacaccttacgatccatcaaagcttaagctaacaagaatgacaaat
gttgacgagaacattcagttgggcccaggcgggcgtggcttcaacatgtggcaaagaggt
agcatcggtgctggtagcaagaacaaatcaacgacggagtcggcttcgtcatcgtcacaa
gaagaacaagcaccatctcaggcgaatcggttctcaatgttgagtgaagatgcaaagaga
ccaatgagtagaggaggttcaggcggatacagctcaagagactcgagaggtaggggtcag
tcaccgatgagtaaacgatcgagagaaagagatagggacagggatagagagagggagaag
gaagcagccattgctgaggttcaaaggatcagtagacctgcaaggccagagccagctgaa
ccaagaggatctaaagagattgctgcacctgtcaaaccagagaagaaggaagagcctacc
atgcctgattccaaggtcaagcatacctcagtagcaactgtcgaggagttcctcaatctc
aaggactttgctgaagcaacaaggtgcgtctctgaattgccaagcaagcagaggcatatc
tttgtgcaatctgcggtagacaatgtaatagagaagaagcaggacatgagggaatcggtt
ggcgttctcttccactcgctattaaacagtaatctagtaacaaaagagcaatatttaaca
ggaattaaagatatggtggagtttgcagaagacatggcaatagacatccctaagatctat
gagtatcttggtgagataatgggtgctacagtaattgagagggcggagtacttagagcta
caagccactgcagttatgcctctaaaagagtttcagacggctggtgtgcttttggctgag
gtcctcaggacagcttcaagaagaattggtgctagtgcagtatgtcatatatggcagcaa
tctggtcttagatgggaaaccttcctccccgacggtgaaaatgttcaggaatttgtgcaa
aagaagggtgtagacttcacattagatggtgcaagcgccactgacaatggccttaacagt
gtccaaggtgactgggtagccacgtttaacagaggacttacgaatctacttaacgagaaa
ccagataataataagatctttgactggataaagtctaatgtgactgacacacacaaacag
catcctgaattcattcgtgccttagttactttaatctgccagcatgcagcagaaggtgaa
gggcagaactgccggatcgaccctgagattctgaaacaacgaggtccgatactacagcga
tacatcgatagcaagcgccctctggagcttcaagcattatatgctgtccaggcgctcaac
cattcactacatagccctccaggtctgctacgaatcttatttgacgttctctacgatgaa
gatgtagtatcggaggatgcgttctacgactggaagaagagtgaggatcccaaggagagc
gcagggaagggcgtggcactcaaatccgtgacgagtttcttcacatggctagccgaagcc
gattaa
DBGET
integrated database retrieval system
