Lytechinus variegatus (green sea urchin): 121427420
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Entry
121427420 CDS
T11173
Name
(RefSeq) E3 ubiquitin-protein ligase Trim36-like isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121427420
04121 Ubiquitin system [BR:
lvg04121
]
121427420
Enzymes [BR:
lvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121427420
Membrane trafficking [BR:
lvg04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121427420
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121427420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
SPRY
zf-C3HC4_3
zf-C3HC4
fn3
zf-C3HC4_2
ANCHR-like_BBOX
RING_XB3-XBAT31
zf-RING_2
Apolipoprotein
Mce4_CUP1
Hydro_N_hd
DNA_topoisoIV
FN3_DSCAM-DSCAML_C
COS
FapA
FlxA
Motif
Other DBs
NCBI-GeneID:
121427420
NCBI-ProteinID:
XP_041479738
LinkDB
All DBs
Position
14:complement(5029558..5061710)
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AA seq
884 aa
AA seq
DB search
MKLKLAYSYCLRFADIVNRLSTMASNMEHLERELICPICNDYFTTPLLLPCNHNVCHRCA
KAQLTGNSGRCSFHASSESLQSVDTNHETTTPTSSRPSSAAANRKSRKLSLTSLSSTPTS
PLDTPGGGFNTANRSSMRRSFRERKSVTGSGPITPRDKVGTKSKKLGTSGLGSRPESPIS
ESSRPDSPRGDAMTGPLETPRGRKGSTGSVTSLGSRSDSFSGTLGMRGRTPSTGKLNGPT
ATSIHCPTCDEEVHLGDKGINGLFRNFALEVVVDRYKLAAKKAASIPCGSCKKKPPEDAA
KSCLDCKSPYCTECFAIYHPWGTPRAQHVCIGPTYNYRPKTLMCNDHHGEKITMYCEGCH
KPICHRCKFSGSHADHKVSIIERKYAAMKEKMEQTISAIAKRRQNITDQVEKLERISSSI
EESAGAMQKALAEALELLQSTLSERHTDLTQRASEEVTQRTQNIRKVLDTYKDVLQGCSV
ADLASELLKETDKAMFVQAAKPLVGRLVQTAKSLKQTEEMCENYETFGDFQLDSTCALKS
LRELDFIKAPGQPVLQPKASNPHACLEWIPSTDGGAVDSYTVEYLKLESSKQAEEGLERP
TSLPLNNGNGDQGASESDDEWTKVSDLTDCRYEPRNLEMDTSYKFRVKAFNPAGTKSSDC
ILLKTPPAPVLPFKWTQCQSSVPHISSKVRKDGQEVLVSPTSTMFSSNSGSFPTSPIALE
PVHFVGDKKLTSGKHYWEVQVDKATLAIHVGIASERMAERFSRSSDGDAIADRDSGHDSC
DELDDEVSLQDPTVFVTHCMGKLTLPSPTSSPRKTSNKASSKPSSPRTCSIQSNVVGVLL
DAEAGRVSFYDGSSKECLFSRKIKVSGGIQPALTIVGSGTVRMN
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaaattagcatacagttattgtttgcgatttgctgatattgtaaaccgtctt
tccaccatggctagtaacatggagcacctcgagcgagagctcatctgtccgatctgcaat
gattacttcaccacaccactccttcttccatgcaatcacaatgtgtgccaccgatgtgcc
aaggcacagctcaccggtaactccggacgttgcagcttccacgcctccagcgaaagtctc
cagtcagtcgataccaaccatgagacgaccacgcccacttcctcgagaccgagcagcgca
gcagccaatcgcaagtcccgaaagttgtcgctgacgtcactatcgagcacgcccacctct
ccgttggacacgcccggcggaggcttcaacacggcgaacaggagttcgatgaggagatcg
ttccgggaaaggaagagtgtgacgggttctggtccgattacgccaagggataaagttggc
acgaagtccaaaaagcttggcacatcaggattaggatcgaggccagaatcgcctatttct
gaatcctctcgtcccgattcacccagaggtgatgcgatgactggtccacttgagactcca
aggggacgaaaaggatccacgggtagcgttaccagtctgggaagcagatcagattctttc
agtggaacgcttggaatgagaggaagaacaccatcgacgggaaaactgaatggcccgacg
gcaacatcgatccactgcccgacctgcgatgaggaagttcatctgggagataaaggcatc
aatggtctcttcaggaacttcgccttggaggtcgttgtcgacaggtataagttggcagcc
aagaaggccgctagtatcccctgtggctcttgcaagaaaaaaccgcctgaggatgcagcc
aaaagctgtctggattgtaagtcaccttactgtacggagtgcttcgccatatatcatcct
tgggggacaccacgagctcaacatgtctgcattggtcccacctataactacagaccaaag
accctgatgtgcaatgatcaccatggagagaagatcaccatgtactgtgagggatgtcat
aaaccaatctgccacaggtgcaagttcagcgggtcacatgccgatcacaaagtttccatc
atagaaagaaaatacgctgcaatgaaggaaaagatggaacagacgatcagtgccattgca
aaacggcggcaaaacatcacggatcaggtggagaaacttgagaggatttcatcttctatt
gaagagagtgcaggcgcaatgcagaaggcgttggctgaagccttggaactgttacaatca
acgctcagcgaaagacacactgacttgacgcagagggcgtctgaggaggtgacccaaagg
acacagaacatccgcaaagtattggacacctacaaggatgtcctccagggatgcagcgtt
gccgacctggcttctgaactgctgaaggaaactgacaaggctatgtttgtacaagctgcc
aaacctctcgttggaagattggtgcaaacggccaagtcgctcaagcaaacagaggagatg
tgtgaaaattacgagacatttggtgacttccagctagactcgacatgtgctctcaaatct
cttcgggaacttgatttcatcaaagctccgggacaaccagtattacagccaaaagcttcc
aatccccacgcctgccttgaatggataccatcgaccgacgggggcgctgttgattcttat
acagtggagtacctgaagctggaaagcagcaaacaggcggaagaaggtttagaaagaccg
accagtctcccgctcaacaatggcaatggcgaccaaggcgcgtctgaaagtgatgacgag
tggacgaaggtctcggacctgacagactgccggtatgagccaaggaatctagagatggac
acctcctacaagttcagagtgaaggcttttaatccggctggtaccaagtccagcgattgc
atactcttgaaaacaccaccggctccagtgctaccttttaaatggacccaatgccagtca
agcgtgcctcatatttcatcaaaggttcggaaagatggccaagaggtcttggtgtcgcca
acatcaaccatgttttcatcgaactccggctcattcccgacctcgcccattgcactggaa
cccgtccactttgtaggggacaagaaactaacgtcgggaaagcactactgggaggtccaa
gttgataaggccactctcgctatccacgttggtatagcaagtgagcgtatggcggagcgc
ttcagccgcagcagtgacggcgacgccattgcagatcgcgacagcggacacgacagttgc
gacgaactcgacgacgaggtctcgctgcaagatcccacggttttcgtcacacattgcatg
ggcaaattgacgctgccgtcaccgacgtcatcaccgcgaaagacctcgaataaggcatcg
tcgaaaccttcgagtccgaggacatgtagtattcaatctaatgttgttggtgtgctctta
gacgctgaagcaggtagagtgtccttctacgatggttcttcaaaggaatgtcttttctct
aggaaaatcaaggtatctggtgggatccaaccagctcttaccatcgtcgggtcaggaaca
gttagaatgaattag
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integrated database retrieval system
