Lytechinus variegatus (green sea urchin): 121427429
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Entry
121427429 CDS
T11173
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00512
Mucin type O-glycan biosynthesis
lvg00514
Other types of O-glycan biosynthesis
lvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
121427429
00514 Other types of O-glycan biosynthesis
121427429
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lvg01003
]
121427429
Enzymes [BR:
lvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
121427429
Glycosyltransferases [BR:
lvg01003
]
Glycan extension
Type 3 chain
121427429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
121427429
NCBI-ProteinID:
XP_041479754
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All DBs
Position
14:15314223..15327047
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AA seq
389 aa
AA seq
DB search
MDFNRVLSLSLGLVAGILFAIVWSKYEDFSSVLDTKLQSYSESNSGESQGKGNRDQRNDR
INKFLHGQRTNAGNHQTGVSKNGLQYGVNGKSFYFTFDKPVTNPGMGSQKTEEQIEIASW
QMFDPQYDANKLKSALSVFCVITVGGSGIPSYGKSLFQSWTSHCNDFVILSNTDDGKYNV
KNAHLPDGPSKSWERTKNVMSYVVQKHPNFDWYVKVEHDVFLVLENYRYMLLMHQAYLPG
FAGHVLTGTNQRGSIVALSKEAAIQAVKVFPKCGSLYGGKEDFRELEACLRQAGISSRQD
GRDGKGVSRFQMVLVKPSLPLNAHQSLDWVWRYIDKPEKLGEDECCRDYPVSFHNLSPNS
LYLMDYMVYHMRPFGIGNYVCPVEQDKTG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaatagggtcctgtccctctcacttggcctcgttgcggggatattgtttgct
atcgtttggagcaaatacgaagatttctcgtctgtactggacaccaaactccaatcttac
tccgaatcaaactctggggaaagtcagggaaaaggaaatagagaccagagaaatgacaga
atcaacaaattcctccacgggcagcgtacaaacgctggcaatcatcaaacaggagtctca
aaaaatggattgcaatatggcgtgaatggaaaaagtttttacttcacatttgataaacca
gtgacgaatcccggcatgggatcccaaaagacagaagaacaaatcgagattgcaagttgg
cagatgtttgatccgcaatatgatgccaataagttgaagtctgcattatcagtcttttgt
gtcatcacagtcgggggttcgggtataccatcgtatggtaagtccttgtttcagtcatgg
acgtcacactgtaacgactttgtcatattgagcaataccgatgatgggaaatataatgtg
aagaatgcccatctgcccgatgggccttcaaagtcatgggagaggacaaagaacgtcatg
agttacgttgtacaaaaacacccaaattttgattggtatgtaaaagttgaacatgatgtt
ttcttagtcttggagaattaccgctacatgcttctcatgcatcaggcgtacttgccgggt
ttcgcagggcacgtgttaaccggtaccaaccagcgtggttcgatcgtagctctgagcaaa
gaggcagccatccaagccgtgaaggtcttcccaaagtgtggcagtctgtacggaggcaag
gaggacttcagagagcttgaagcatgccttcgtcaagctgggatcagttcccgtcaagat
ggtcgtgatggcaaaggggttagtcgtttccagatggtccttgtgaaaccttcattacct
ctcaatgctcaccaatctttagactgggtgtggaggtacatcgataagccagagaagctg
ggagaggatgaatgctgtagagactaccctgtaagttttcataacttgtccccaaacagt
ctttacctgatggattacatggtgtaccatatgagaccgtttggaatcgggaactatgtc
tgcccagtagaacaggataagacaggatag
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