Lytechinus variegatus (green sea urchin): 121427607
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Entry
121427607 CDS
T11173
Name
(RefSeq) chordin-like isoform X1
KO
K04657
chordin
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121427607
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Gene cluster
GFIT
Motif
Pfam:
VWC
CHRD
Motif
Other DBs
NCBI-GeneID:
121427607
NCBI-ProteinID:
XP_041480021
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All DBs
Position
14:11228839..11290824
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AA seq
965 aa
AA seq
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MYRITLYAAFVGLVCLGSLIDAVEARRNGRRRNKNYGDDSASTGDVDKVRPTPRRPQIPL
KAEIQPPHSRGVPGCTFGADFYNLEDEWHPNLGEPFGEMVCVLCECRPDVEDGILLGRIS
CNNIKCPDITCPNDEDPVIRDGFCCKTCPSDDVDKEKPSRTNGSSEAQRPDDTASTEGTE
DTLQGEAFVSILSGRLTSVNTRAISRGSFLLLNNNLHFTLHVTRLSTPLEVVFTGVLNTT
LHVHTVRDVDSDTICGEWKNLPQIVSRDLRNRNIFVTLTTRSHEHGEVRGRLIPHRALST
ESFSVLLTPKRRNGPVNEILGKGGLVMLSSSKNGNAINFAALLDGLVESERTEDVNIVVE
ITKRNDVLKRIEVAVASEAIDVVDVVESLPSTIKKAITKGQLKMRLTVQGEGDVGMLVGS
ITPLKTCNTIHAVLSGSQALDRSKTTGASGSAIFTLDDDGTINYMVRLTGLQTEVSAITI
EMPNRNRRKIVADIFGNYRDGVAQGKWLRPKLRDVQMFLHGELYVNVATGAFTTSELRGR
IVQLPYQGHIRRHAKMPIQMSGSLMDPTQETGAAGHAWLLLDENCSLNYEIAVVGLNSVV
EDDIGTDSPPSTPHFYAEIGEIENGESRVRLVLNAFRGNSARGTLTDVNPGLLENMDRGQ
AFIQISTKNHREGEIRGQIILPNTCHGSSNGNNLVPVHDPMPAINVDDDPNSCFFEGRYH
APMSTWSPDYDRNCTTCTCKKTVTICDPVICPQLSCENSVIAPGECCPSCPKPEEPEEPG
CHYKGDNKVHRIGTQWHPYIPPFGYTTCVLCTCMSGGQLNCSRLACPPLDCPKPIRLNAN
DCCQVCPEPEPTTPPTEPPVDDTLLQADEVEKGCSFLGEFYRNGAEWHPLVSPFGTMSCV
RCRCRNGQAKCKGRTCPQLNCQETIRTKGECCPRCKEDTLTVPTTLPTILEISAEKKSRR
KPKLS
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcatcacactttacgccgccttcgtcggcctggtatgcctgggaagtctgatc
gatgccgtcgaagcccgcaggaatggaaggaggaggaacaagaattacggagacgattct
gcctcaactggtgatgttgacaaagtgaggccgacgccaaggagacctcagatcccactc
aaggcagagatacagcccccgcattccagaggtgtcccagggtgtaccttcggagcagac
ttctacaaccttgaagacgagtggcatccgaaccttggggaaccctttggtgaaatggtc
tgcgtcctctgcgaatgccgacctgatgtagaagatggtatactcttgggaaggatctca
tgtaataacatcaaatgtcctgatatcacgtgtcctaatgacgaggatccagtgatcaga
gatgggttttgttgcaagacctgcccgtcagacgatgttgataaggagaagccctcacga
acgaacggatctagcgaggcacagcgccccgacgatacggcgtcgactgagggtacggaa
gacacacttcagggagaagcttttgtatcgatcctatctggtcgtttgacatcggtgaac
acgagagcgatttctcgaggatctttcctccttctgaataacaacctccacttcacatta
cacgtaacaagactaagtactcccctcgaagttgtctttaccggcgtactcaatacaacg
ctgcacgttcatacagttcgtgatgttgactccgatacgatttgcggagagtggaaaaac
cttcctcagattgtctcacgtgatctgcgcaacaggaacattttcgtcacacttaccacc
aggtcacacgagcatggagaggtcaggggtcgcttaatcccccatcgggcactttccaca
gaatcctttagtgttcttctgaccccgaagcgacgcaacggtccagtgaatgaaatctta
gggaaaggaggactagtaatgctctcatcctccaagaatggaaacgccatcaactttgct
gctctccttgatggtttagtagagtcagaaaggacagaagacgtcaacatcgttgtcgag
atcacgaagagaaacgatgtcttgaaaagaattgaagttgccgttgcaagcgaggccatt
gatgtggtggacgtcgtcgaatcgctgccgagtacgattaagaaggcgatcacgaaggga
cagttaaagatgagattgacggtccagggcgagggcgatgtaggaatgctcgttggcagc
atcacaccactaaaaacgtgcaatactatccacgcagtactatccggtagccaagccctg
gacagatcaaagactacaggagctagcggttcagccattttcaccctagatgacgatggg
acaatcaactacatggttcgattgactggcctacaaacagaagtcagcgccatcaccatt
gagatgcccaacaggaataggcgaaagatcgttgctgacatcttcggaaactacagagat
ggagtggctcagggaaagtggctacgacccaagctccgtgacgttcagatgttccttcac
ggtgaactctatgtcaatgttgctactggtgccttcaccacctccgagcttcgtggacgc
atcgttcaacttccctaccagggtcatatcaggagacacgcaaaaatgccgatccagatg
tcgggctcccttatggatcctacccaggagactggagctgctggtcacgcttggctcctc
ctcgatgaaaattgctccctcaattacgagatcgccgttgtgggactcaacagcgtggtt
gaagatgacatcgggaccgacagcccaccatctacccctcacttttacgccgagatcggt
gaaatcgagaacggggaaagccgagttcgattggtcctgaatgctttcagaggaaacagc
gctcggggaactttgacagatgtgaatccaggattattggagaacatggacaggggacaa
gctttcattcagatcagtacaaagaaccatcgggaaggtgaaatcagaggacagatcatc
ttgccaaacacctgccatggatcatccaacggtaacaacctcgtccccgtccatgatccc
atgcccgccatcaacgtcgatgacgaccccaactcctgcttcttcgaaggtcgataccac
gccccgatgtccacctggtcaccggactacgacaggaactgcaccacatgcacatgcaag
aaaacggtgacaatctgtgacccagtgatctgccctcagttgtcttgtgaaaactccgtc
attgctcctggtgaatgctgcccctcctgtccaaaacccgaagaacctgaggagcctggc
tgccattacaagggcgacaataaggtacatcgcatcggaacgcaatggcatccgtatatt
cccccatttggatatactacatgcgtgctttgtacttgcatgtccggtggccaactaaac
tgctcaagactcgcctgcccgccattagactgtccaaaaccaattcgactaaacgcaaat
gattgctgccaagtttgtccagaaccagagccaacaacaccgccgacagaaccaccagtg
gacgacacattactgcaagccgatgaagtagaaaaaggatgttcgttcctcggtgaattt
tatagaaatggcgccgaatggcatcctcttgtgtcgccatttggtacaatgagctgcgtc
agatgtagatgtcggaatggtcaggcgaaatgcaagggaagaacctgtcctcagcttaat
tgtcaagaaacaatcagaacaaaaggcgaatgctgcccgagatgtaaagaagacacgtta
acagtaccaacaacattaccaacgatattagagatctccgcggagaagaaatcaaggaga
aaacccaagttgtcatag
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