Lytechinus variegatus (green sea urchin): 121427834
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Entry
121427834 CDS
T11173
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1-like
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lvg04990
]
121427834
Domain-containing proteins not elsewhere classified [BR:
lvg04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121427834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_NWD2_C
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_Nup120_160
DUF4062
WHD_NWD1
Beta-prop_SPT8
NBCH_WD40
AAA_16
NACHT
Beta-prop_ACSF4
AAA_22
Beta-prop_IFT122_1st
NPHP3_N
Beta-prop_DCAF12
AAA
Beta-prop_WDR19_1st
nSTAND1
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_Aladin
Beta-prop_WDR75_2nd
NPHP3
ATPase_2
Beta-prop_NUP159_NUP214
nSTAND6
NB-ARC
eIF2A
Motif
Other DBs
NCBI-GeneID:
121427834
NCBI-ProteinID:
XP_041480338
LinkDB
All DBs
Position
1:complement(89535574..89564673)
Genome browser
AA seq
1643 aa
AA seq
DB search
MADEPTISARSAFFQSLVNGETENLPDQESNTVRIFLSSTFTDMKEERNKLMQEVFPELR
RYCQQRQLEFEVVDMRWGVRDSATADHLTSFLCLNEIDRCKRMSQGPYFVGFLGNKYGYR
PLKSTIQSRMFKKLMTIISQNDRITQDDINLLKMWYAEDANAIPPVYALRPITALLPHFH
NKSEPDKEGQARRTWWEMYTKMRNVFDEFARSSAAREVYSEQEIHSFVMSVTEEEIRHAL
KDNTNIQDTCLFFIRDIQNLVPSRENRGLVADYADVEIKNGGDVQFNRFPQDKLSILKAE
YIPCLVPSDSVMKYNIPWTEKGFDPTDCKEHIEYLNDMCKVFEKRMKDMIDKSLQDRKMF
TRDLLQINMYKELLHHSSFCKIKYSTFQGREDLIGSIQACLTANLERPLIIHGVSGSGKT
SIMAMVAKRSKEFFGRNCVTVLRFLGTSVQTSSIHMTLQSICRQICIAYGVEQPADDHLD
DFSETVQTFNNLIRTVPSKERPLLLLLDSIDQLASNNNAHMMNWLPKHLHENTHIVVSML
EEEHQCLKNIKVALKDNRCYIKMDPLGKDNGLAIMKSLLKSRDRTLTHEQVDIVTDAFIK
CPQPLFLKLLFEEFVSWPSFKKIEEINLPGNISEAILSLFKDLEDRHGRLFVAHALGYLT
AGKSGLTETEIEDVLSCDDKVLNDVYQYWDPPDEDIVRIPPSLWKRLRLDIDEFITERQA
GGKTVLAWYHRQFIETAQKMYLGDTSTKVARHQLLADMFRGEYSDGAIKPITLHGRKKEF
IKADRQAASQPLMFGDDVFNLRKLQELPCHLMQCTPVDCFPNGLIKYVMYNYEWILAKLR
ALSFMELIDDFMQYDDESALLIDALYLSGSNIKEDPFALAGQLIGRLTDFVDVYPNIGRL
LQEAKSWMQTTTLPLIIPRGACLIPPGGQLKASLAGHPNRVEAIRYACSEGMLVTICKDN
DGQPMANVWDEPKIELIHTLEIKAKQKASGKLTLVLSPDEKHVVFGCQVLGVFALCSGSL
VCKLETGKNHAISSCRIQEDGCHAVAGAEKGTNVYLWDLRNGQLLMSLNHPAAVHFTFFE
GNSEILSVCQDGRIRRWSINTKDCIHSFEVHRAGDIREATRSAMNKTMITGSYDGTIKIS
SYLHEEHNSSITLKAHKKAISCLLILSENRLASGSGDSVVYIWDMVTGMAILSFKGHVGM
ITSLWFGKADQSAADSQEILVTGSKDDCLNVWSLNTDHTENSLITSLEGHSSWITDVTGS
SSQKIYSASNDKSAKVWDYKRNMVIKRERHKEHAFGLVFGPDKSTVITSGQEGTVKFSRF
SDCQVIRQESGFAYTLLISSDGKKLMGGMVDEGVVRVWDVVQSEDRKSTFDLEGHDKDVL
CIIEGNDNQIITGSLDTTVKLWSLESKSCLKTLEGHKGSVELVKVTKQEADTLILSADSK
GMLNIWKYKTGECLLSAKEHRTSIRCLSVSDDGKYAVTGGNDKKALLWSLDSSDGSFGKV
LQRLAVHTSEVTCAIFMHDGRRIITASHSGSKQLYMWNISDETDQHFMDGHSHAILDMHI
SADDCYLVTASRDCTIKAWHLPSRQLMASFDCKSAIKHIDVVHINEDHYRIGGENKTGTI
LLLDLFLPKADRSEAYYQSPVMK
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagcctacaatatcagctagatcagcgttcttccagtctctggtgaacggt
gagactgaaaacctacccgatcaagaatcgaacaccgtgaggatcttcctgagttctact
tttacagatatgaaagaagaaagaaacaaattgatgcaagaagtatttccagagcttcga
cggtattgtcaacagaggcagcttgagtttgaagtggttgatatgagatggggtgtacga
gatagtgccacagcagatcacctgacatcgttcctgtgccttaatgaaattgacaggtgt
aaacgtatgtctcagggaccttactttgtgggttttcttggaaacaagtatggctaccga
ccactgaaatcaaccattcaatcacggatgtttaagaagctcatgacaatcatatcacaa
aacgatcgcataacccaagacgacatcaatcttctgaagatgtggtatgcagaggatgca
aatgccattcctcctgtatacgcacttcgacctatcacagcacttcttccacatttccac
aacaagagtgaaccagacaaagaagggcaggcaaggagaacctggtgggaaatgtatacc
aagatgaggaatgtctttgacgaatttgccagatcttcagcagcgagggaagtttacagc
gaacaggaaatccattccttcgtcatgtcagttacggaagaggaaataagacatgccctg
aaagacaacacaaacattcaagatacatgtttgttctttatacgagatattcagaatctt
gttccgtctagagaaaatagaggtttagttgcagactatgctgacgtggaaataaagaat
ggaggtgatgtccaattcaacaggtttcctcaagacaaactctccatactgaaggcagaa
tacattccatgtttagtcccatctgattcagtcatgaagtacaatataccctggaccgag
aagggtttcgacccaacagattgtaaggagcacatagagtatctgaacgacatgtgcaaa
gtctttgaaaagcggatgaaggatatgatagacaagagcctgcaggatcgaaagatgttt
actagagacttgctccagataaacatgtacaaagagcttctacaccattcgtccttctgt
aaaatcaaatacagcacatttcaaggacgagaggatttgatcggttcaatccaggcttgc
cttacagctaatcttgaaaggccattgattattcatggtgtgtccggatcaggaaagacc
tctatcatggcaatggtagccaaacgcagcaaagaattctttggaaggaattgcgtgaca
gttctacgattccttggaacgtcagtacagacatcttcaatacacatgacccttcaaagc
atatgtagacagatctgcattgcatatggagtggagcaacctgcagatgatcacctggat
gatttctcagaaacagttcagacattcaacaacttgatcagaacagttccatccaaagaa
aggcctcttctattactcctagatagcattgaccaactggcttccaataataatgctcat
atgatgaactggttacccaaacacctccatgaaaacacccatattgttgtctccatgctt
gaagaagagcaccaatgccttaaaaatattaaagtggctttgaaggataacagatgctac
attaaaatggaccctttgggaaaagataatggtcttgcaatcatgaagagtttgctaaag
agcagagacagaacactgacgcatgagcaagtcgacattgtgacagatgccttcataaaa
tgtcctcagcccttgttcttgaaactgttgtttgaagaatttgtgagctggccatctttc
aagaagatagaagagataaatcttcctggtaatatttctgaagctatcttgtccttgttc
aaagatctagaagatcggcatggaagactctttgtagcccatgctcttggttatctgaca
gcaggaaagagtggtctgacagaaacagagatagaagatgtcctttcgtgtgatgacaaa
gtcctcaatgatgtctatcagtactgggatcctcctgatgaagacattgttcgaattcct
ccatctctctggaagaggttacgtctggacatcgacgaattcattactgaacgtcaagca
ggtggaaagactgtgcttgcttggtatcaccgacagttcattgaaactgctcagaaaatg
tatcttggcgacacttctaccaaagtagctaggcaccagctacttgctgacatgtttagg
ggagagtatagtgatggtgctatcaaaccaattacactacatggtcgtaagaaggaattc
ataaaggctgatcgccaagcagcatctcaaccactaatgttcggagacgatgttttcaat
ttgcgcaagttgcaagaactcccatgtcacctcatgcaatgtacacctgtagattgcttt
ccaaatggtttgattaagtatgtgatgtacaactatgaatggattttagccaagttgaga
gctttaagtttcatggaacttatagacgacttcatgcagtatgatgacgagagcgctctt
ctgatagatgcactttacctctcggggagcaatatcaaggaggacccgtttgcattggca
ggccagttaattggtcgattgactgactttgtggatgtatatccaaatattggaagactt
cttcaagaagccaagtcctggatgcaaacaactactctgcctctcataattcccagaggt
gcatgtcttatccctcctggagggcagttaaaagcatctcttgcaggtcatccaaataga
gtcgaggccattcgatatgcatgttctgaaggcatgcttgtaacaatctgtaaagataat
gatggacaaccaatggcaaatgtatgggatgaaccaaagatagaactcattcacaccctc
gagataaaagctaagcaaaaagcttcaggtaaattgacactcgttctgagccctgatgag
aaacatgttgtctttggttgtcaagtgcttggtgtgttcgcactttgtagtgggtcactg
gtttgcaagttggaaactggaaagaaccatgctatcagctcatgcaggatacaagaagat
gggtgtcatgctgtagctggtgcagaaaagggcacaaatgtgtacttgtgggatttgaga
aatgggcaactcttgatgagcttgaatcatcctgcagctgttcattttacctttttcgaa
ggcaattctgagattctgtccgtctgtcaagatggccgtatcagacgatggtcaatcaat
accaaggactgcattcacagttttgaggttcatagggctggtgatatcagggaagcaact
cgctcagcaatgaataagaccatgatcacaggaagttacgatggaactatcaagatatca
agctatctccatgaagaacacaattcaagcattactctcaaagcacacaagaaagccata
tcatgcctcttgattttgtcagaaaaccgacttgcttctggttctggagactctgttgtt
tacatctgggatatggtgacaggaatggcgatattgtccttcaaaggtcatgttgggatg
atcacatctctatggtttggtaaagctgaccagagtgctgctgactcacaagagattctg
gtaactggatcaaaggatgattgcctgaatgtgtggagtctgaatactgaccacactgag
aattctctcatcacctccttagaaggacattcatcatggattacagatgtaacaggatca
agcagtcagaaaatatactctgcatctaatgataaaagtgctaaagtatgggactacaaa
cgaaatatggtgataaaaagggagaggcacaaagagcatgcatttggacttgtctttgga
cctgacaaatcaacagtcattacgagtggacaagaaggtactgtcaagttctcacgattc
tctgactgccaggtgatccgccaagaatctggctttgcctacactctcttgataagcagt
gatgggaagaagctcatgggtggaatggtcgatgaaggtgtggttcgtgtatgggatgtt
gttcaatcagaggacaggaagagtacattcgatcttgaaggtcatgacaaggatgttctg
tgtattatcgaaggtaatgataaccagatcatcacagggtcactagatacaacggttaaa
ctgtggtcgctggaatcaaagtcatgtctgaaaacactcgaagggcacaaaggttctgtt
gaacttgtgaaagtgacaaagcaagaagcagacactctaatcctatcagcagatagtaag
ggtatgctgaacatctggaaatataagacaggagaatgtctgctatcagctaaagagcac
aggacatcaatacgatgtctttctgtatctgatgatggtaaatatgcggtcacaggagga
aatgacaagaaggcgctactctggtcattggattcatctgatggttcttttggtaaggtg
ctacaacgtttggcagtacatacatcagaggtaacgtgtgctatctttatgcatgatggt
agaaggattatcacagcttcacattcaggaagtaaacagctctatatgtggaatatatca
gatgaaacagaccaacatttcatggatggacattcccacgcaatcctagatatgcatata
tcagcagacgattgttacttggttacagcatcccgtgactgcactattaaggcttggcat
cttccatcccgacagttgatggcgtcctttgactgcaaatcagcgataaagcacatagat
gtggttcacatcaatgaagatcactaccgtataggaggagaaaacaaaactggaactatt
ctcctactggatctgtttctcccaaaagcagacaggtctgaagcctactatcaatcacca
gtaatgaaatga
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integrated database retrieval system
