Lytechinus variegatus (green sea urchin): 121427964
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Entry
121427964 CDS
T11173
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121427964
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lvg04054
]
121427964
04090 CD molecules [BR:
lvg04090
]
121427964
Pattern recognition receptors [BR:
lvg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121427964
CD molecules [BR:
lvg04090
]
Proteins
121427964
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
LRR_1
LRR_14
TIR
Motif
Other DBs
NCBI-GeneID:
121427964
NCBI-ProteinID:
XP_041480477
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Position
14:18702737..18706105
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AA seq
916 aa
AA seq
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MSFFFSYLILSLVSVLDSEFIPSPMRSPRCRLSVTSDGLEADCSWLGLQSVPLELPGGVT
ELNIEGNGIQSLNRSSFSHLPLLFKLNLHRNKLTSINEGTFDTLPLLQELSLSQNSLAEL
PTTIFQKNQNLELVDFTQNLFSSVPILALRGATNLESVILIKNRIKSVNFTGFRSQDVEV
IDISSNNITSVHENQFSPFKNISTRSFRLSYNKLTSLPDSVFGQLHMTKDIVLSHNGLQN
FSLYPFLGMESLINLSLSSNPLESVYPFNDTTPRADLPPLKHVVLSGNHLFTLPSRAFVG
MGSVTRLDLGKGKLKSIENDSFAGMFALEFLDLSSNRLATLRREIFEPMTRLHTLILAKN
KFEYLPTTVFQDLRSLKVLDFTKNKIAKIGTTWDIPSLLTLDLTSNLIFRINDGNFYGLS
NLTELTISSNPINLIKNNAFSGVENLQTLTMQSLTTIGSGSSRPFRNLVQLISLDLSGSN
MNPSTIFFKGLVFLKTLKLRETLLTPLKLWDNLRNASVLDTLFGLEYLSLSSNTLNGLIP
GTFQNLTSLTRLLLEKCGIFQLPAGLFENLASLRYLYLTRNNIKVLSASHFLGLHSLGTL
LLENNAIKEIEVDLFKHTPKISYVYFPHNLISVVHEGTVLPTVMLDISNNPLSCVCEVRW
FLSYLDNPTNNLILVNPNDTICSPSSIQRFIGKRLLSSRPDSSDCGPDIIILACAPVFVL
GLLVVLAATYYYRWKINYKLFHLKLAVLGFNQFEDAREHQDFRRDLNVIYHDDDEEWVER
VFRPGIDEALPDFQRIAYGDRDLAFGMFYMDAIIDLMENSYKVAFIVTNTAIFDHSFINK
FHMAVDHMNEVGFEKLVLIFVEDIPDNHLPYLMRLFLSKNKPYFLWSDNMDWQALFWAKF
AKLMKANKQINDTLPT
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctttttttcatacttgatactcagccttgtatctgtattggatagtgaattc
attcctagtccaatgcgatcgccacgttgtcggttgtcggtcaccagcgatggattagag
gcagattgttcctggcttgggttgcagagtgttcctcttgaacttccaggtggcgtcacc
gaattgaacattgagggcaatggaatacaaagtctaaatcgatcttcgttttcgcatctc
ccactcctgttcaaactgaatctgcaccggaacaaattgacttcaatcaacgaagggact
ttcgacacattgccgttgcttcaggaactttctttgtctcagaacagccttgcggaacta
cccacaactatatttcaaaagaaccagaatttggaactagtagattttacccaaaacctc
ttctcctccgttcctattttggcactccgtggcgctaccaacttggaaagtgtaatactg
ataaagaacaggatcaaaagtgttaactttaccgggttcaggagtcaagacgttgaggtc
attgacatatcaagcaataacatcacgagtgtccatgagaatcagttctcaccgtttaaa
aatatcagcactagatcgttccgactttcttacaacaaattgacgtctctgccagacagt
gtgtttggccaactccatatgacaaaggacatcgttctttctcataatggtctacaaaat
ttcagcctgtatccatttcttggtatggaatcacttataaacttgagtttatcatcgaat
ccattggaaagcgtttaccctttcaatgacaccactccgcgtgcagatctaccccctttg
aaacacgttgttctctcgggtaatcatctgtttactctgccatcacgagcttttgttgga
atgggtagcgtcacacgtctcgatcttggcaagggaaaactgaaatcaattgagaacgat
tctttcgctggaatgtttgctctcgagttccttgacctgagttctaatcgactcgctact
ttgaggcgagaaatattcgaaccaatgacccgactccatacactcatcctggccaaaaat
aagtttgaataccttcctacaacagttttccaggacctgagatcacttaaagttttggat
tttaccaaaaataaaatcgccaagatcggaacaacctgggacattccttctttgttgaca
ttggatctcacaagcaatttgatttttcgcatcaacgacgggaacttctatgggctgtct
aatctaacagagctgacaatatcatcgaatccaatcaatctgataaagaataatgccttt
agtggggtagaaaatttgcaaacacttactatgcaatcactgacaaccattgggagcggc
tcaagtcgaccttttcggaatcttgtccaattgatatcccttgatctttccggatcaaat
atgaatccatctacgatcttctttaaaggtctggtatttctaaagacacttaaactacga
gagaccttactgacacctctcaaactctgggacaatcttcggaacgcttcagtacttgac
acgttgtttggattagaatatctgtcactgagctcaaatactttgaatggtttgatacca
gggacatttcagaacctgacttcgttgactagactgctgctggagaaatgcggaattttc
cagctacctgcaggattgttcgaaaacctggcatccttaaggtatctctacctgacacgc
aacaacatcaaagttttatctgcctctcatttcctcgggttacactccttaggaacactt
ctgttggaaaacaatgccattaaagaaattgaagttgatcttttcaagcatactcctaaa
atttcctacgtgtactttccacacaatctcatatcagttgtccatgagggaacagtctta
cccaccgtgatgcttgatatctcgaacaatcctctgtcttgtgtttgtgaggtgcggtgg
tttctgtcataccttgataaccctacaaataatctcatcttggtgaatccaaacgatacg
atctgttctccaagctctattcagagatttatcggaaaacgacttctcagctcccgtccc
gacagtagcgactgtggcccagatatcatcatcttggcttgtgccccagttttcgttcta
gggcttctggtcgtccttgcggcaacgtattactatcgctggaaaattaactacaaactt
ttccacctgaaactagcagtactcggtttcaaccagtttgaagacgcccgcgagcatcag
gattttcggcgcgacctcaacgtcatatatcacgacgatgacgaggagtgggtcgagcgc
gtcttccgacccggtatcgatgaggcgttgccggattttcaaaggattgcttatggtgat
cgggatcttgccttcggaatgttctacatggacgctatcattgacttgatggaaaatagt
tacaaagtcgctttcatcgtgactaacacagccatctttgatcactctttcatcaacaaa
tttcatatggccgtcgaccacatgaacgaggtgggctttgaaaagctggtgctgatattt
gtcgaagatattccggacaatcacctgccgtatctgatgaggctcttcctcagcaagaac
aaaccatatttcctttggtccgataacatggattggcaagccctcttctgggccaagttt
gccaaattgatgaaggcaaacaagcaaataaatgacactctcccaacataa
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