Lytechinus variegatus (green sea urchin): 121428011
Help
Entry
121428011 CDS
T11173
Name
(RefSeq) zinc finger protein castor homolog 1-like isoform X1
KO
K25209
zinc finger protein castor
Organism
lvg
Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121428011
Transcription factors [BR:
lvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121428011
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Motif
Other DBs
NCBI-GeneID:
121428011
NCBI-ProteinID:
XP_041480521
LinkDB
All DBs
Position
14:23547839..23584644
Genome browser
AA seq
2137 aa
AA seq
DB search
MLKTTLKLDAICAKLSKGVSGLPPQEEPCTGAALPGSNGSPRYTRHQDQEASRPDIGSNL
KTFHNGDIAPNCSAQLPTVQATENNGYVIDERPEYNRFVERNGGDDSRCSSPKVLSGASK
RKARQRATRVATQEADSPSDWDDGSINSFQDCDESLDSGVVDSHQDEPVNGLDHWDEEQE
ETADSEFTQEHNHDENISMQNIPFTHATNHKANNGNKLGHDDPSSSKEMEIAPYKVAGHE
LRTRSGSKVPIYDESGLSDEDVAAEKATYDPRAIMEYAERSWCNENGTEIEEGLETNGVV
CDLEESGRSAQGQEVKPRRRRGRPSKSEQMKLVEERDQRIIETQELEEEMRELPPPEQAE
VEQEMDEVQEEQVEYVDDLESEEQGEMSETPASPPPPTSSKMGKDGQMVPGAPYDVEGLE
AVKEYATDTMKEFLGMYGYMEEGAPARDEDLPIEHIRHILELQRRHAEKKRALAHQRLQE
AHRSAAAAHHAAERMEQEDEEEKAMGSDPRSAFMKLGAEGGSEPKDPSMLKEPDHPRVAP
SHAVLQQLAALHQHLRAEESALAEDNSPASGHDLSDASPHQGQDQPRHHRHHPLGRGEEH
APHQDSPSQHASLRERMESLREAAAEGGMSDLCAPPYPGVLAAHLEGKMTNARMATGKTV
KQLIEEQEFMRNLMELGDRPEAKRFSKYDYFIQKLEAGIKSESISKDVPNLRVSKYDSYI
RKLKAGQSINKIIGRKVSASQRIRDIISQQIQLKQGGSGGHDGEPGSKEEAEAEAIEAAI
LENEGLAQREFAAAAAAAAAAAAAATGSDPQLHLDPQRSSNYEYFMSKFNKGEGVPRYTL
DGVTSTSSNSSTSAISPPPGMDDSTVDDSRMERRDDFAGMDEYNPSYEPRDNILKKCLLE
TGRSDLDSEEGSEKGIKSGTLSTSSSPGLEGSAFNRYIARYDIARFGASQDCGRCSYQFK
EHYHCLDKDCKFARFTRKEDVIRHYNWHKRRDNSLQHGFMRFSPSDDCRPYYPGCTLNMK
NTHYHCMQSGCHKVYTSTSDVLTHENFHKKNFTLLSDGFQRFRATEDCGTPMCSFYGQKT
THFHCRRPGCDFVFKNKCDIEKHKTFHMKDDIYRKDGFRKFSKHESCKFEGCRYSNTLNH
FHCIRNGCNFTFTAANQMHSHKRKHERRHRMMEYETGRHFMRSIRPKMKLPLPRINPTYR
SLHSNSAPMGMGEKPLIMPPCPAIIFKSDPGAASIAERAALAGQSAALGASQTSPLAGQM
MALPSHSASRPDVQAVQPSVITSAPSSSGTSTSSLEATSSSHSEFDPARSHPQDMRRATP
DPVSATSVITTTTAAATTTSAEGHLSSEESADERPMDLQMYDRYRYQAQEADLESNDEDR
PTDLSMPDRSQVERMEDEEEEEDKLPSGFAKIATMDNNKDKEGEDLNDSLNLPIASFISP
PSQVTKGEEGGEREEREGESRSSPVTVKKEPRDGETRSDTEAWQKYFRRYTANDHCHSSC
ELLYKGHYHCIVDGCGEYFRSKEGVNKHTRYHLMSDEAAELGFHYYQHGQTCENTFKGCP
FSPLAHYHCMWSLKPGSYCGEVVHTGSSLMKPHYERHHQNPELEVIRHTEAEKPPGFVGA
PIEQAHPKVVLKDQTMKWFTSPPPAQPNDSGYCKMEPGKCTKPECPLVGQKHYHCTRTEC
NFATESHDMLHDHKSNEKLIFDSFRQFSRKLDCRRPGCKYNLLHKHYHCMHQGCQFSFLQ
IQQMESHGRKHMRRIYGKFFNRPNNNSPTGPQQLVLPILPLNNHSPPSNMASPPAALSSP
PGPFHMHPTMVSLASSSPMHQLATSSSPVAMMSHALPINTPGSLQSMFMSPPPSSMSSVL
AVPQPISTPNGLIMGGPSPKPSHQFLVPIAPLDAEDSAPSPSNPMNSPSGLQVLPNFQLG
RWKIRQSSVISPPRISPPNPHKRPLTLVEEDPGAPSGYKRYKRGPLDSSMQERFERFERN
IHCGDNNCQFAMNTTHYHCRHTGCNYKFAGKTMMYKHAQHHDRVDSIIQDDFQRFKASVS
CDRSDCEYTAKNTHFHCLRCPFICTDSGKVPIHRKQHAKTEAVSAAGFKQFSSSEKCISG
DCKYSQKYSHFHCLRQGCMQAVIGMTQMDAHSRKHRL
NT seq
6414 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagaccacgctcaagctcgatgctatctgcgccaaactgtccaagggcgtgtcg
ggccttccgccccaggaggaaccctgcacgggggccgcccttccaggtagcaacggttcc
ccaaggtacacccgccaccaggaccaggaagcatcccggccggacattggctccaacctc
aagacgtttcacaatggcgatattgcgcccaactgcagcgcacagcttccaactgttcaa
gcaacggaaaataatggctacgtgatcgatgaacggccagaatacaacagattcgttgaa
agaaatggcggggacgatagcaggtgcagttcgcctaaagttctcagtggtgccagcaaa
agaaaggcacggcagcgtgcgacaagagtcgccacgcaggaagcagatagtccgtcggat
tgggacgatggctcaattaacagttttcaggattgcgatgagagtttggacagtggtgta
gttgattcgcatcaagatgaaccggtcaatggtctggaccattgggatgaggagcaagaa
gagaccgcagacagtgaatttactcaggaacataaccatgatgaaaatatatctatgcaa
aatatcccctttacacatgcaactaatcacaaggcaaataatggcaataaactaggacac
gatgacccttcttcttccaaagagatggagatcgctccttacaaggttgcgggacatgaa
ctacgcacccgcagcggcagtaaggtacctatttatgatgaatctgggctttcagacgag
gacgtggcggccgagaaggccacctacgatccccgagcaataatggagtatgctgaacgc
agctggtgcaatgaaaacggtactgaaattgaggaaggactcgaaaccaacggtgtggtt
tgtgacttggaggagagtggtagatcagctcagggacaggaagtgaagccacggcgaagg
agaggcagaccaagcaagagtgagcagatgaagttggttgaagagcgagatcaaaggata
atcgagactcaagaattagaagaggaaatgagagaactgcctcctccagagcaggcggaa
gttgaacaagagatggatgaagtacaggaagagcaggtggagtatgttgatgatctggag
tcagaggagcaaggagaaatgtccgaaacccctgcatctccgccacccccgacgtcatcc
aagatgggtaaggacggccagatggttccaggagctccctatgatgtagaaggtctggag
gcagtcaaggagtatgccactgacaccatgaaggaattcctgggtatgtacggctacatg
gaggaaggagctcctgcaagggacgaagatcttccaatagaacatatccgacacatctta
gagttacagagacggcatgcggagaagaagagggctctggcccaccaacgcctccaggag
gctcacaggagtgctgccgctgcccatcatgctgcagagagaatggaacaggaggatgag
gaggagaaggccatgggttcagatcccagatcagcattcatgaagctcggagcggagggt
ggatcagaacccaaggacccctcgatgttgaaagagccagatcatccaagggtggcacca
agccatgctgtcctgcagcagctcgcagccctccatcagcacctacgcgccgaagaatcc
gccctggctgaagacaacagccccgcatcggggcatgacctgtctgatgcatcgccccat
cagggccaggatcaaccccgtcaccataggcaccatccattgggtaggggcgaggaacac
gcacctcaccaggatagcccctcccagcatgcaagcttgagggagcgcatggagtccttg
agggaagccgcagcggaaggtggtatgtccgatctgtgtgccccgccttaccctggtgtc
ctggctgctcatctggaaggcaagatgacgaatgccaggatggcaacgggtaagaccgtg
aagcagttgatagaggagcaggagttcatgaggaacctcatggagttgggagaccgtcca
gaagccaagaggttctccaagtatgactacttcatccagaaacttgaagcaggtattaaa
agtgaaagtatatccaaagatgtaccaaacctgagggtatccaagtacgacagctacatt
cggaagttgaaggcaggccagtcaatcaacaagatcatcggccgcaaagttagtgcttcc
cagcgcatcagggacatcatcagccaacagatccagctgaagcagggaggcagcggtggc
catgatggtgaacctggctccaaggaagaggcagaagcggaggccatagaagctgccatc
ctggaaaacgaggggttggcacagagggagtttgcagccgctgcggctgctgctgctgcc
gcggcggccgcagctactggttcagatccccaactgcatctcgatccgcaacgtagttcc
aattacgagtacttcatgtccaagttcaacaaaggggagggtgtacctcggtacactcta
gacggagtcacgtcgacatcctccaactccagcacgtcggcgatcagtccgcctcctgga
atggacgattcaaccgttgacgactctaggatggagaggcgtgacgactttgctgggatg
gacgagtacaacccctcgtatgaaccaagagacaacatcctcaagaagtgtctcctcgag
actgggaggagtgacctggattcggaggagggcagcgagaagggcatcaagtccggaact
ctgtcgacatcgtctagccctggactggaaggcagtgctttcaatcgatacatagccagg
tatgacatagccaggtttggtgcttcccaggactgcgggcgctgttcataccaattcaag
gaacactaccactgtctggataaagactgcaagtttgctaggtttacccgcaaggaagac
gtcatacgccactacaactggcacaaacgacgagacaactcgctccagcatggcttcatg
cgcttcagcccctccgacgattgccggccgtactaccccggctgcaccttaaacatgaag
aacactcactaccattgtatgcagagcggatgccacaaggtgtacaccagcacatccgac
gtcctcacccacgagaacttccacaagaagaacttcacgctcctcagcgatggcttccag
cggttccgtgccaccgaggactgcgggacaccgatgtgcagcttctacgggcagaagacc
acccacttccattgccgacgccccggatgcgacttcgtcttcaagaacaagtgcgatatc
gagaagcacaagacgtttcatatgaaggatgatatctacaggaaggatggcttcaggaag
ttctcgaagcatgagtcatgcaagtttgaaggttgtcgctactccaatactctcaaccat
ttccactgcatacgcaatggctgcaacttcaccttcacggcggccaatcagatgcactct
cacaagcgcaaacacgagcggcgccatcgcatgatggagtacgagacaggccgtcacttc
atgcgctccatccgtccgaagatgaagctgcctctccctcgcatcaacccaacctatcga
agcctccacagcaacagtgctccgatgggaatgggagagaagcccctcatcatgcctcca
tgtcctgcaatcatcttcaagtcagaccctggtgctgcgtcgatagctgagcgtgctgcc
cttgccggtcagtccgctgctctaggagccagccagacatcgcctctcgcaggacagatg
atggcgttacccagtcactccgcatctcgccctgacgtccaggctgtccagccatctgtc
atcacctcagcaccatcatcatcaggtacctctacttcctccttggaggccacatcgtcc
agccacagtgaatttgaccctgcaagatcccatcctcaagacatgcgcagggccacaccc
gatcctgtctctgcaacctcggtcatcaccactacaaccgctgctgctactacgacctcg
gcagagggtcacctttcttcggaagagagtgcagacgagaggcccatggatcttcagatg
tatgacaggtaccgctaccaagcccaggaagcagatctggaatcaaatgacgaggacaga
cctacagatcttagcatgccagatagatcacaggttgagagaatggaggatgaagaagag
gaagaagacaaactaccctcgggcttcgccaaaatagccacgatggacaacaacaaggac
aaggagggcgaggacctcaacgactccctgaacctgcccatcgcttccttcatctcaccc
cccagtcaggtgaccaagggggaggaagggggcgagagggaggagagggagggggagtcc
cggagcagcccggtcaccgtgaagaaggagcccagggatggagagacgaggagtgacaca
gaggcttggcagaaatactttagaaggtacactgctaatgatcattgccactcatcctgt
gaactcctgtacaaaggtcactatcactgtatagtggacggatgtggagaatacttcagg
tctaaagaaggcgtcaacaagcatacaaggtatcatcttatgagcgacgaggcagcagag
ctcggctttcattactaccagcatggtcagacgtgtgagaataccttcaagggttgtcca
ttcagtccactagcacactaccactgtatgtggagcttgaaacccggaagctactgcggt
gaggtcgtccacaccggtagcagcctgatgaagccccattatgagagacatcaccagaac
ccagagcttgaagtcatcagacacactgaggctgagaaacctccagggttcgttggagca
cccatcgaacaggcgcaccccaaggtggtcctcaaggatcaaacgatgaaatggttcacc
tcaccaccgcctgcacagccaaacgacagcggttactgcaagatggaacccgggaagtgc
accaagccggagtgtcctctggtgggtcagaagcactaccactgtacccggacggaatgc
aactttgccacggagagccacgacatgctgcacgaccacaagagcaatgagaaactcatc
tttgacagcttccggcagttcagccgcaagttggactgccgccgtccgggatgcaagtac
aaccttctgcacaaacactatcattgcatgcaccagggatgccagttctccttcttacag
attcaacagatggagtctcatggccgcaagcacatgcgtcgcatctatggcaagttcttc
aaccgccccaacaacaactccccaacgggaccacagcaactagtcctccctattctacct
ctcaacaatcactccccacccagcaacatggcctcacctcctgcagccctctcctcacca
ccagggcccttccacatgcacccgaccatggtgtccctggcaagctccagtcccatgcac
cagcttgccacttcttcaagtcctgttgccatgatgtcccatgcgttgcccatcaacacg
ccgggttctctccagagcatgttcatgtcaccacccccaagctccatgtcatcagtccta
gccgtcccgcagccaatatcaacacctaatggcttgatcatgggaggaccgtccccgaag
ccttcgcatcagttcctggtgcctatcgcccctttggatgctgaagactcggctccaagc
ccgtcaaacccgatgaacagtccatctggactacaggtgctgccgaacttccagttaggt
cgatggaagattcgccagtcctccgtcatctcgcctccaaggatttcacctcctaaccct
cacaagcgtcctctgacgttggtcgaggaggatcctggggcgccatctgggtacaagcgt
tacaagagaggccccctggattcctccatgcaggaacggtttgaacgctttgagcgtaac
atccactgtggtgacaacaactgccagttcgccatgaacacaactcactaccactgccgc
cacaccggatgcaactacaagtttgcaggcaagaccatgatgtacaagcacgcccagcac
cacgaccgcgtcgacagcatcatccaagacgacttccagcgcttcaaggcctcggtcagc
tgcgaccgcagcgattgcgagtacacggccaaaaacactcactttcactgtttacgttgc
ccgttcatttgcaccgacagcggcaaggtgcccatccatcgtaagcaacacgccaaaacg
gaagctgtgtccgccgccggcttcaagcagtttagttcgtccgagaagtgcatctctggt
gattgcaagtattcccagaagtactcccatttccactgtctacgtcagggctgcatgcag
gccgtcataggcatgacacagatggacgctcatagccgcaaacatcggctctga
DBGET
integrated database retrieval system
