Lytechinus variegatus (green sea urchin): 121428202
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Entry
121428202 CDS
T11173
Name
(RefSeq) Y-box factor homolog
KO
K09276
Y-box-binding protein 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121428202
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121428202
03041 Spliceosome [BR:
lvg03041
]
121428202
Transcription factors [BR:
lvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
121428202
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121428202
mRNA cycle factors
Common to processing body (P body) and stress granule
121428202
Spliceosome [BR:
lvg03041
]
Common components
Common spliceosomal components
General mRNP proteins
121428202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
121428202
NCBI-ProteinID:
XP_041480745
LinkDB
All DBs
Position
14:complement(19744347..19752739)
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AA seq
309 aa
AA seq
DB search
MSEGQEDQPQTNEAPEKIVLATKVSGTVKWFNVKNGYGFINRDDTKEDVFVHQSAIVRNN
PRKYQRSVGDGEVVEFDVVEGTKGNEAARVTGPDGAPVQGSKYAADKRRYRGRPRYYRRR
RPRNSQGDEEEMASDEKDGGEENDAPKEGRRQYRDGGRGGYRGGRRRYRGPRRPRPNQDG
QPQEGEQNEEDGERQEKEGGDKPSGNRRRRYRPNYRYNGRRPQSRGDQNEDGDRENGEGG
EEKEGGDEQRRRQRRPYRRRYNNRKGASNKGGEGDQGENGSRNDPSDGPVIKEEQPAPAD
TKASIKVEE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagggccaagaagaccagccccagaccaacgaggctccagagaagatcgttctg
gccacaaaagtttccggaacagtcaagtggttcaacgtcaagaatggctatggatttatc
aatcgagatgacacaaaggaagatgtatttgtccatcaatcagccattgtaagaaacaac
ccacgcaagtaccagcgaagtgttggtgatggtgaagtggtagagtttgacgttgtagaa
ggaaccaagggtaatgaagctgcccgtgtaaccggtcctgatggtgccccagtacaaggt
agcaagtacgcagcggacaagcgccgctaccgtggacgcccacgctactaccgccgccgc
cgaccccgcaactcgcaaggagacgaggaagagatggcctccgatgagaaggatggagga
gaagagaacgatgctcccaaggaagggaggaggcagtatcgcgatggaggaaggggaggc
tatcgtggcggtcgacggaggtacagaggtccacgtaggccaagaccaaaccaggatgga
caacctcaagaaggggagcaaaatgaagaagacggtgaacgccaggagaaggaaggcggt
gacaagccaagcggcaaccgtcgtcgacgttaccgtccaaattacaggtacaacggccga
cgcccccagtcccgcggtgaccagaacgaggatggagatagagagaatggggaaggtggc
gaggaaaaggaaggtggcgatgaacaacgtaggaggcaaagacgcccttaccgtcgtcgc
tacaataaccgcaaaggtgcctccaacaagggcggagaaggggaccaaggagagaacgga
agccggaatgacccctcagacggaccggtcattaaggaagagcagcctgctccagcagat
acaaaggctagcatcaaggttgaagagtaa
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integrated database retrieval system
