Lytechinus variegatus (green sea urchin): 121428388
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Entry
121428388 CDS
T11173
Name
(RefSeq) parafibromin-like
KO
K15175
parafibromin
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvg03021
]
121428388
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
121428388
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Gene cluster
GFIT
Motif
Pfam:
CDC73_N
CDC73_C
INT_SG_DDX_CT_C
Motif
Other DBs
NCBI-GeneID:
121428388
NCBI-ProteinID:
XP_041480918
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All DBs
Position
15:14870098..14895122
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AA seq
535 aa
AA seq
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MADVLSLLRVYHSQNKVITERNDDVIFGEFSWPKDTKTNYVTYGTGKEGEAKSYYTLESI
LYLLKNEKLTHTSYVKKALEENIPVVRRPDRRDLLAYLSGEIKTSANIDKSAPPEISRQR
PTQVKRSADEPQTETTKKRRFEDDEVRRDKKRLLERLEGHKEGAVATTDHIRSLSDTMSI
ERIASIRAKIHTKKRVTIKADVEADLGVGGLEQRSFIDAEVDVSRDIMSRERNWRTRTSV
LRSNGKEFKNIFAILQSVKAREEGKQGQQNQNQSSHQTPSQSQPTERRKTVQQTAQYNRY
DQERFKGKEETEGFKIDTGGSHMLAFHGMSNLNKPAQETAPARKPVTPAPAPRPEPAAAP
KPQAPAKRVSRTPIIIVPAATTALITLYNAKDILQDFRFITSEDKKKQGARKENDVLIQR
RKDDGSTVPYRVIDTITKLTQADWDRVVAVFVQGPTWQFKGWPWMNGNNPVDIFARIRGF
HLKFDEFKIDPNVKKWNVHIMEISRSKRHLDKARLLNFWEVLDKYMVKNKSHLRI
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgttttaagtttacttcgtgtttatcactctcagaataaggttataacagaa
agaaacgacgatgttattttcggagaattttcatggcccaaagataccaaaaccaactac
gttacttatggtacgggcaaagaaggggaggcaaagagttactacacactagaatctatc
ctctacctactgaagaatgagaagctcactcacaccagctatgtcaagaaagcacttgaa
gagaatattccagtagttcgtcgtcccgacaggagagatctgcttgcctatcttagtggg
gaaataaaaacatctgcaaatatcgacaaaagtgcaccccctgaaatatcaaggcagaga
ccaacacaagtcaaaagaagtgcagatgaaccgcagacagaaacgaccaagaaaagaaga
tttgaggatgatgaagttcgacgagacaagaaacgtctgttggagagacttgagggtcat
aaagaaggtgccgtggcaaccactgatcacattcgatccctctctgatacaatgtccatc
gagcgtatcgcatccatcagagcgaagatccataccaagaaacgtgtgaccatcaaggca
gacgtggaggctgaccttggggttggaggtcttgagcagcgtagtttcattgatgccgag
gttgacgtctcaagggatatcatgagcagagaaaggaattggagaacaagaacatctgta
ctaaggagcaatggaaaggaattcaagaacatctttgctattcttcagtcggtgaaggca
agagaagagggcaagcaaggccaacagaatcaaaatcaatcatcacaccaaaccccatca
caaagccagcccacagaaagaagaaaaacggttcagcagactgcacagtacaacagatac
gatcaggagagattcaaaggaaaagaagaaactgagggtttcaagatcgatactggtggc
tcccatatgctggccttccatgggatgtctaatctcaacaaacctgcacaggaaactgca
cctgccaggaaacctgttacccctgcaccagcaccgcgcccggaacccgcagcggcccct
aagccccaggcacctgccaaaagggtatcgcgtacccccatcatcatcgtccctgcagcc
actacagctctcatcacactctataatgccaaggatatattacaagattttaggtttatt
acgtcggaagacaagaagaagcaaggtgctaggaaggagaacgatgtcttgatccagagg
agaaaagacgacggtagcacggtgccctacagggtcatagacacaatcaccaaactcacc
caagcagattgggatcgtgttgtagcagtatttgttcaaggaccaacgtggcaattcaaa
ggatggccatggatgaatggcaacaaccctgtagatatctttgctagaattcgtggtttc
catttgaaatttgatgaattcaagattgacccaaacgtcaagaaatggaacgtccacata
atggagatcagtcggagtaaacgccatttggacaaagctagacttctcaatttctgggaa
gtattggacaagtacatggtgaaaaacaaatcacatttgagaatctaa
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