KEGG   Lytechinus variegatus (green sea urchin): 121428474
Entry
121428474         CDS       T11173                                 
Name
(RefSeq) negative elongation factor B-like
  KO
K15180  negative elongation factor B
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121428474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lvg03021]
    121428474
Transcription machinery [BR:lvg03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     121428474
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 121428474
NCBI-ProteinID: XP_041481036
LinkDB
Position
15:9966103..9982936
AA seq 570 aa
MSGFEEVGIAGSIHLREALTNCTDPLQAIEDFQSENGILLPTLQPALPLLDLHMIRRFEF
HHSIMEELREKLMSRTQELANSDTKGRFKTIEDLLSKCFPLIRVKSIQPVVMSVMKCLPK
IPEKYLTVLVEDRSLYDVASIEVKQQIWQRNPSLFGDEVSPLLTDYIKNKESVLFGSEAV
NSQMFFLVSPKMRRQGHVVQKLTKMVGKSVKLFDMVLQFLRTLFLSTRNMHYCTLRAELL
MSLHDLEIHEICTEDPCHKFTWTLDACVRDRQVDDKKAKELQGFLDGVRRGQEQVLGDLS
MILCDPFAVHTLATSVIRHMTSLISQDKLPRDSPDLTSLLRMLSLGLGAWDMLDSQRFRE
PKLENDLVLKFLPALMSLLVDDQMRIVNRRLNDTGDDTDLKTLPPFLLKYIRRNKIGATL
ILYYALHVTSKRNKDALARVLPNIVKMEGDLSFNDIFLHPFVAQLSVLLDEFSSDSFCEI
VFDGFLLHGASRENVARHSLRLMEFVFHKLPAAKLSKLQNSLEPKPEHSQAVRDLYGTVM
EKISSHKPSPVKVPEPVDSPLRSVPTPAPL
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgtctggatttgaggaagtgggtatcgccgggagtatacaccttcgggaggccctcacc
aattgtacagatcccctccaggccattgaggacttccagtcggaaaatggcatcctcctc
ccaaccctccaacctgcccttcctctcttggatctccacatgattcgacgttttgagttt
caccactctatcatggaagaattacgcgagaaactcatgtcccggacgcaggagcttgca
aacagtgacaccaagggacgcttcaagactatagaggatctcctctcaaagtgctttcca
ttgataagggtcaagagcatccaacccgtggtgatgtctgttatgaaatgtcttccaaag
attccagagaagtacctgacagttcttgtggaagacaggagtctctatgatgtggcctcc
atcgaggtgaagcaacagatctggcagcggaacccgtctcttttcggcgacgaggtctca
ccactcctcacagactacatcaagaataaagagtcggtgctgtttggtagcgaggcagtg
aactctcagatgttctttcttgtgtcaccaaagatgagacggcagggccatgtggtccaa
aaactcacaaaaatggtcgggaagagtgtgaagctctttgacatggtgctgcaattcttg
cggacactcttcctcagcaccaggaacatgcattactgtacactaagagcagaactactg
atgtctctacatgatttggagatccatgaaatttgtactgaggatccgtgccacaagttt
acctggaccttagatgcatgtgttagggatagacaggtggatgataagaaggccaaggag
ttacaaggattcctggatggtgtgcgaaggggacaggaacaagtccttggtgacctatct
atgatcctgtgcgatccctttgctgtacacactctagcaaccagtgttattcgtcacatg
accagcctcatcagtcaagacaaacttccaagggacagtccagatctgacatctcttctc
cgcatgctctcgcttggtcttggtgcttgggatatgttggacagccaacgatttagagaa
cccaagttggaaaacgatctcgtcctgaagttcttgccagcactcatgtcgctcctcgtc
gatgaccagatgagaattgtcaaccgccgtctcaatgacaccggcgacgacacggacctg
aagacacttccaccattcctcctcaagtacatacgaaggaacaagatcggtgcaacgctc
atcctgtactatgccttgcatgtgaccagtaaacggaacaaagatgccctcgccagggtc
ctcccgaacattgtcaagatggaaggggatttatcattcaatgacatcttcctacaccct
tttgttgcccagttgtctgtactcctggatgagttctcgtccgattccttctgtgagata
gtctttgatggatttttgcttcatggagcatccagggagaatgtagcaaggcattcttta
cgattgatggagtttgtgtttcataagctgccggcagctaagctctctaagctacagaat
tcccttgaacctaaaccagagcacagccaagcagtacgtgatctgtatggcacagtgatg
gagaagattagctcccataaacccagtccagtcaaagtccccgagcctgttgactcacct
ttgagaagtgttccgacccctgcaccgttatga

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