Lytechinus variegatus (green sea urchin): 121428492
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Entry
121428492 CDS
T11173
Name
(RefSeq) pre-mRNA-splicing factor 38B-like isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121428492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lvg03041
]
121428492
Spliceosome [BR:
lvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
121428492
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
121428492
NCBI-ProteinID:
XP_041481058
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Position
15:complement(8451603..8480875)
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AA seq
377 aa
AA seq
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MPPKNNTLPQWGNQQSMNLNPLILTNIQSSPYFKNDLFKLKTYHEVIDEIYYKVSHLEPW
ERGSRQTSGQIGMCGGVRGVGAGGIVSSAYCLLYKLYTLKLTRKQLNGLLTHSDSPYIRA
LGFLYIRYSQPPQDLWDWYEEYLNDEEEVDSKAGGGNCITIGQMLMHFLVKLDWHSTRFP
RIPVPVMKDIENKVSAWQYAQRQNNPEEEGGGGGGEAMDDYNTQDDNNEWTANDKRMERF
QDERKSSRDRDDDSHRRDRDRHRDQDRDRDRNRERDRDRGSSRDSHRDRSRNNSRDRSRD
HDRHRDRSRDLDFDTALRKERERQTRDHARGSSRDDRHRRSRSRSHERRRRSRSRERRRR
SRSRSRDRHRHRSRDRR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaagaacaacacactaccccaatgggggaaccagcagtccatgaacctgaac
ccgctgattctaacaaatatccaatcatcaccgtacttcaagaatgatctctttaaactc
aagacataccatgaggtcattgatgagatttactacaaggtttctcatcttgaaccttgg
gagcgaggtagcaggcagacgtcaggacagattgggatgtgtggaggggtgcgtggagtc
ggagcaggtggcattgtttcctcagcgtactgtctcctttacaaattatatacattgaaa
ctgactcgcaagcagctgaatggtctactaacacattcagattcaccgtatatcagggca
ttgggattcctttacattagatacagtcaaccacctcaggatctatgggattggtatgaa
gaatatttaaatgatgaggaggaagttgatagcaaagctggtggaggaaactgtatcacc
atcggccaaatgttgatgcacttcttagtcaaattggactggcattcaactcgctttcct
cgtatcccagttccagtcatgaaggatatagagaataaggtatcggcatggcagtacgct
cagcgtcagaacaacccagaagaagaaggaggaggaggaggaggggaagcaatggatgat
tataatacacaagatgataacaatgaatggacagcaaacgataagagaatggaaagattc
caggatgaaagaaaatctagcagagaccgagatgatgacagccatagaagggacagagat
agacatcgagatcaagatagagatcgagatcggaatcgggaaagagatcgagataggggg
agtagtcgtgacagtcatagggacaggtcccgcaacaacagcagagatcgttcccgcgat
catgacagacaccgcgacagaagccgagatctcgactttgatacagccctgcggaaggaa
cgcgaacgacagacgagagatcacgcccgtggaagcagccgggatgacagacatcgacga
tcacgcagcagaagtcatgaaaggagaaggcggagccgctccagagaaaggagaaggagg
tctcgatcacgatcacgtgatcgtcatcgccatcgaagccgggataggagataa
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