Lytechinus variegatus (green sea urchin): 121428528
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Entry
121428528 CDS
T11173
Name
(RefSeq) probable polyketide synthase 1
Organism
lvg Lytechinus variegatus (green sea urchin)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
KR
PS-DH
ADH_zinc_N
KAsynt_C_assoc
Methyltransf_12
ADH_zinc_N_2
ADH_N
PP-binding
ACP_SdgA_C
PKS_DH_N
Methyltransf_23
Methyltransf_11
CurL-like_PKS_C
DUF7471
Motif
Other DBs
NCBI-GeneID:
121428528
NCBI-ProteinID:
XP_041481149
LinkDB
All DBs
Position
15:27076866..27100111
Genome browser
AA seq
2424 aa
AA seq
DB search
MGSNKTSWGYFPVAVVGIGTRHACGANTTDDFWKVLKEGKECILDIPADRWAIENFHDED
QTRQGKMVTKRCGLIDDMDGFDNLFFKISPREAASLDPQQRHLLEVNYEAFEDAGINPDT
LGESCGVFVGIGMMDHAIQLVDTSTTDAYTLTGIAHSVSANRISYAFNLKGPSFAVDTAC
ASGLTALHLACTSLWNRECSIALMSACNGIQLPDITVGFSALGVLSPDGRCSPFSSTANG
YVRSEGWGALILKPLSQALADNDHIYTVIRGSAIAANGLANSLTMPSPPAQEFVMKEAYE
KFGVSMSDVHYVEAHGTGTMVGDPLEAEAISKAFDRPSDKPLKIGSVKSNFGHTEVAAGV
TAAIKVALMMENRAIPPTINFVSPNPHINPEEMRLDIVTEIQPFPTNDKHIIGLNSFGFA
GALAHCIFEEPPKRPVKELTSEQVCGWKFGDSDKEGQPIIIPLSAKSPEALTAVAKQWMD
VDVDQDAMSVISWMSTRRRLHENRLTVISSSGKQFKTQMKDFVESGGAENATSGTVYSGE
PKICMIFPGQGQQYANMGRQLYKTEPVFRNTVNECDAIFKKISGWSVLEEKSLFVERPHS
ADYKPDTFINDLEVSQPAILFIQLGLFNLWTHWGVKPACVIGHSLGEVSAAYACGGMTLE
EAVETIYIRSVEQGKLKGTGSMAALRMTLEEARELCSKHERLYVAAINAPGSMTIAGNTQ
AIEQIAADNPTIAKQLRVQCAFHTPDMDPTEKTFKEKMEKVVKTPAGVRNIPFYSTLTGA
RYEGDFKTAYWWDNIRNAVEFQSAVENVLRDLECDMFLECAASATLLSSVNQIAKGSGVK
IQLTTIASGQRNQDDRMCALRSLGNMHNNGVPLNWKNITRDTAVYTKLPLYPWQHKPFML
EPEYRRKRRLGLDDRTYKGQNGQLSLETFPFHSDRTAKSKLVFPESGFVEYIMEATSGEN
ELPVVNKVAFTQPLEWPEEKTVTGTKKATLNLDLVRDGNRVEISYKGYVCSTAEVEEGTA
QDNTIPVNDIIQRCPKKSSAEDFYGYMQEMGLEYGAKFQVVQDVSLGNGECVGSLESAQD
NKQRIQTTHLDACFQLLTYTLGARSSLYQPATIDSIRMNVPSLPAGEPLLAYTSITDCDS
WALRGNVMITLTNGKVLAEIKGCTCKNTCGIQTDIDINKCLYRRDFQTVKAHLPPIKEVA
KVFEEENLRKLFPDLMESVTRAESVFSNMGAICLAYIKHGLGQVPVKERSDYLDPRYYRR
LEKLAKDNSIRQITYDEIPSIKEETLKVAPELKQELTMAQSLGEHLPTTLRNPQSAMTLL
FKPECMASYFLDSLTTTFYYKAGAEMVRQAVLKALETKSTVRILEVGARMGGLTHHILEH
LEDLCIEGRVEYVFTDLSVAFFPHARDHLAEYPFVKYQQLDIETDIEGQGFVPGSVDILI
CLDTLHSTGHLQEAIYYMRELICDDGWILLYEATTVKFIAEVIFGALRLCWVFEDDRPEC
CWMEQNDWKLALEKNGFDDVVALSSPKELFHSVLIGRKAGGDDACINPKAAPVTTRKQWL
LVSHPDNAQFVNLVKSSLSGTVTSLSYDEIMEADLGKLKEDGHVIEALFIWNVDHDNGFK
VLLHFLQHIGVNVENVCKLWMVTFAATSGPRPINAAGAGLVHAAANACQIPFVTVDIPEE
VTNGDKVWASRLVNTMLGNKLSDMELVVKDGMVLTPRLTRMQLPEVKVSETPYWKLTQSD
DPFKTESSVEDLGIAYQDGFEVVPGTVLVKVSAASINKRDVDLARGITAQEEGVGAFGME
FCGVVEKVGEGVTTIKPKDEVLGFSTHCLASYTLANADLVVKKPKNLTPSQAATTSIAFA
TAYYSLVERANITNGESILIQVTEPGLRDAAVQIASNAGAKVICSMEDTSQAASLKKMGA
KTVSLSSSSTFVNDVINATDGAGVDVVLNSLQGKQMEKSLELLAAGGRFCSITDSNAINF
KLQMRLLQKNRSLISCNIDSMLQHQKSLLQRILRKVTELMGEGKLRPLDVTSRPVTDYPT
LFADESITNAGKVAIEIPSAFKPNKVISTTQLFKKNATYIVTAAESGLSQIFARWLYNNG
ARHIAMCYLTDGGKSKASRTVTYLTGKGAEVFEYCHELHVRGPEGGVAKIFGDLKKRNAP
AIRGIFCLGGYRLPGKETMSDITFDSLQTMLSAKVRPAKLSHVMSEKMGLELDYFLTVSN
DDVAWGNPSAVASVTGDSYLESFALKRRLEGKPALNVQVGALRGIDAYEFGGQTTLPVKD
GEASLHVEEFLVVLGKLLLSPDTPPCVCITHQDWEAVLKFSHDHTLKYRHLAGGEQVAIS
DCKLSLEDLQKQVKNKLGDLLCVNPDTIDLRQPMINYGVDSLMAVEMVTWASRELSVVIS
QLDILGGITTGLLLEKAIDNNVCI
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcaataaaaccagttggggatacttccctgtagccgtggtaggaattggcaca
cgtcatgcttgcggagcaaatactaccgatgacttttggaaggttctgaaggaaggcaag
gagtgcatcctggatattcctgcagacagatgggcaatcgagaactttcatgacgaggac
cagaccagacaaggaaagatggtaacaaagcgatgcggactcatcgatgatatggatggc
tttgataacctcttcttcaagatttcacctcgagaagcagcatccttggatcctcaacag
cgccatctcctagaagtcaactatgaggcctttgaagacgcaggtatcaaccctgatacc
ctaggtgaatcctgtggtgtctttgttggtattggtatgatggatcacgccattcagcta
gttgatacgtccaccaccgatgcgtacaccctgactggtattgcacacagtgtgtcggct
aatcgtatctcttatgcattcaacctcaaaggtccatcctttgcagttgatacggcttgt
gcaagtggactgacggccctccatcttgcctgtaccagtctctggaacagagaatgcagc
atcgccttgatgtcagcttgcaacggaatccaactgcctgacattacggttggtttcagt
gccctcggtgtactttcacccgatggccgttgcagtcccttctcaagtaccgctaatgga
tacgttcgcagtgaaggatggggcgccctcattctcaaacccctcagtcaggctcttgct
gacaatgaccacatctatactgttatacgcggtagcgccatcgcagccaatggattagcc
aatagtttgaccatgccttctcctccggctcaagaattcgtcatgaaggaagcttacgag
aagttcggtgtatccatgtctgacgtacactatgtcgaagctcacggcaccggaacaatg
gttggtgatcctcttgaagcagaagccatctccaaggcatttgaccgccccagcgacaaa
cctctcaagattggatctgtcaagagcaactttggacataccgaagttgctgctggagtg
acagctgccatcaaagtcgccctgatgatggaaaaccgtgccattccaccaaccatcaac
ttcgtctctccaaatcctcacatcaacccggaggagatgaggctggatatcgtgaccgaa
atccagcccttcccaaccaacgacaaacacatcatcggtctcaactcgtttggatttgca
ggagcactggcccattgtatctttgaggaaccaccgaagagaccagtaaaggaactgacc
tcagagcaggtgtgtggatggaagtttggtgactctgacaaggaaggccaacctatcatc
attcctctatctgcaaagtctccagaggcattgacagctgttgctaaacaatggatggat
gtagacgttgaccaggatgccatgagtgtaatctcctggatgtccaccagacgtcgactt
catgaaaacaggctcaccgtcatatccagctccggcaaacagttcaagactcagatgaaa
gacttcgtcgaatcaggtggtgcggaaaacgcaacgtcaggcacggtatacagcggtgaa
cccaagatctgcatgatcttccccggtcaggggcaacagtacgccaacatgggaagacaa
ctctacaagacagaaccagtcttcaggaacaccgtgaacgaatgcgatgccatctttaag
aagatcagtggttggtccgtcctcgaagaaaaatctctctttgttgagcgccctcattcg
gcagactacaagccagacacattcatcaatgatctcgaagtctcccagccagccatcctc
ttcattcaacttggtctcttcaatctctggacccactggggtgtcaaacctgcctgtgtg
atcggacacagccttggtgaggtatctgctgcttatgcctgtggtggaatgacccttgaa
gaagcggttgagaccatctacatcaggagcgtggagcagggaaagctgaagggaactgga
agtatggcagcgctgaggatgacccttgaggaagctagggagctctgtagcaagcacgag
cgtctctatgtagcagcaatcaatgcacctggatccatgaccattgcaggcaatactcaa
gccattgagcagattgccgccgataacccaaccattgccaaacagctgcgtgtccagtgt
gccttccatacaccagacatggatccaaccgagaagacattcaaagagaagatggagaaa
gtggttaagacccctgctggtgtacgaaacatcccattctattctactctcactggagct
cggtacgaaggagatttcaagacggcatattggtgggataacatccgcaatgccgttgag
ttccagtctgcagttgaaaatgtactgcgtgacttggaatgtgatatgttcttggaatgt
gccgcctcagccacactgctgtcgtccgtcaaccaaattgcaaagggttctggtgtgaag
atccaactcacaaccatcgcatccggccaaagaaatcaggatgaccgcatgtgtgccctt
cgatcccttggtaacatgcacaacaatggtgtgccattgaactggaagaatatcaccagg
gacactgctgtgtacaccaaactccctctctacccatggcaacacaagcctttcatgcta
gagccagagtatcgacgcaagcgccgtctaggtcttgatgaccgtacctacaaagggcag
aatggtcagctcagtctcgaaacattcccattccacagtgaccgcaccgcaaagagcaaa
ctagtatttccagagtctggatttgtcgagtacatcatggaagcgaccagtggtgaaaat
gagctccctgttgtgaacaaggttgccttcacccaacctctagaatggccagaggagaag
acagttaccggaacaaagaaggctactctgaaccttgacttggtgagagatggaaacagg
gtagagatcagctacaaaggatatgtatgcagtactgcagaagtagaggaggggactgcc
caagacaacactatccctgtcaatgatatcattcagagatgtcccaagaagtcttcagca
gaagacttctatggatacatgcaagaaatgggtctcgaatacggtgcaaagttccaggtg
gtccaggatgtaagtttgggaaatggagaatgtgttggatctctcgagtcggctcaagat
aacaagcagagaatccaaacaacccacctagatgcttgcttccagcttctcacttacact
cttggagcccgatcaagcctgtaccaaccagctaccattgacagcattcgcatgaatgta
ccatcactccctgctggcgagcctcttctggcatatacttccatcactgattgcgacagc
tgggcactcagaggaaatgtcatgattactttgacgaacggaaaggttcttgctgaaatt
aagggatgcacatgtaagaacacatgtggtatacagacggacattgacattaataagtgt
ctttacaggagagatttccagacagtcaaggcacatctaccaccaatcaaagaagtcgcc
aaggtgtttgaggaagaaaatctaaggaagctcttcccagatctcatggaatcagtaaca
agggcagaatcagtgttttcaaacatgggagcaatctgtcttgcatacatcaagcatggt
ttgggacaggtaccagttaaagagcgctctgactatctagatccaagatattatcgacga
ctagaaaagcttgcaaaagataactcaatacgtcagatcacatatgacgagatcccaagt
atcaaagaggagacgcttaaagtggcaccagagctaaagcaggagttgactatggcacag
agtcttggtgagcatctcccaaccaccttgagaaacccacagtcagcaatgacattgctg
ttcaagcccgagtgcatggcctcttacttcttggattcactgactacaacattctactat
aaggctggcgcagagatggtacgacaggcagtcctcaaggctctggagaccaaatccaca
gtcaggatactagaagttggagcccgcatgggaggtcttacacatcacatcctagaacat
ctagaagatctgtgcatagaaggacgagttgagtatgtgttcacagatctcagtgttgct
ttcttcccacatgcccgagaccacttggccgaatacccattcgtcaagtatcagcaactt
gacatcgaaacagacatcgagggtcaagggttcgtcccaggatcagtcgacattctgatc
tgcttggacacactccactccactggtcatctccaagaagccatctactacatgcgagag
ctcatctgcgatgatggatggatactgttgtatgaagcaacaactgtcaagtttatcgca
gaggtgattttcggtgcccttcgtctttgctgggtctttgaagatgacagaccggaatgt
tgctggatggagcaaaatgactggaaactggccctggagaagaatgggttcgatgatgtt
gtggctctatcatctcccaaagagcttttccacagtgtcctcattggacgtaaggcagga
ggcgatgatgcttgcataaatcccaaagctgcaccagtcaccacacgcaagcaatggctc
ttggtgtcacatcccgacaacgcacagtttgtcaatcttgtcaagtcatcactctcgggt
acagtgacatctctttcttatgatgaaatcatggaggctgatcttggcaagctgaaagaa
gacggacatgtcattgaggctctcttcatctggaatgttgatcatgacaacggcttcaag
gttcttctgcacttcttgcaacacatcggtgtgaatgtagagaacgtttgcaaactatgg
atggtcacctttgctgccacttcgggaccaagacccattaatgcagcaggtgctggtctt
gtccatgctgcggcaaatgcctgtcagatcccattcgtcacagtagatatcccagaagaa
gtgacaaatggagacaaggtatgggcttctagactagtaaacacaatgctaggaaacaag
ttatctgacatggagttggttgtaaaggatggcatggttcttaccccaaggcttacaaga
atgcagcttcctgaagttaaggtcagcgaaaccccctactggaagctcacccaatctgat
gatccattcaagacagagtcatcagtagaggatctgggcatcgcataccaagatgggttt
gaggtggttccgggaacagtacttgtaaaagtatcagcagccagcatcaacaaaagagat
gttgatcttgcaagaggtatcacagcacaggaagaaggtgttggcgcattcggcatggag
ttctgtggagttgtggagaaagtaggagaaggcgtaaccacgattaagccgaaagatgaa
gttcttggattcagtacacactgtctggcatcgtatactctagccaatgcagatcttgtt
gtcaagaaaccaaagaatctgaccccttcacaggctgcaacaaccagcatcgcctttgca
actgcatactacagcctggttgaaagagctaacatcacaaatggggaatctattctaatt
caggtgactgaaccaggattaagggatgcagcagtgcagattgcatctaatgcaggggca
aaggtcatctgctccatggaggatacatctcaagcagcatcactgaagaagatgggtgca
aaaactgtatccctgtcatcatcttctacatttgtgaacgatgtcatcaatgccacagat
ggagcaggtgtggatgttgtcctaaactccctccagggtaagcagatggagaagagtttg
gaacttctggctgccggtggacgtttctgttctatcaccgactcaaatgctatcaatttc
aaactacagatgaggttactgcagaagaataggtcattgatctcgtgtaatattgacagc
atgcttcagcaccagaagtcactacttcagaggatccttcggaaggtaactgagctaatg
ggtgaaggtaaactcaggccacttgacgttacttcacgacccgtcacagattacccaact
ctatttgcagatgaaagcatcactaacgctggcaaagttgctatcgaaatcccatcagca
ttcaaaccaaacaaggtcatctcaacgacgcaactcttcaagaaaaatgcaacctatatc
gtaaccgctgctgagtcaggcctatcccaaatctttgctcgatggctctacaacaatggt
gcacggcacatagccatgtgctacctgacagatggtggaaagtccaaggcgagtaggacg
gtcacctaccttaccggtaagggtgctgaagtttttgagtactgccatgagcttcatgtg
cggggcccagaaggtggagttgccaaaatatttggtgatctgaagaaaaggaatgcaccg
gctattcgtggcatcttctgcctcggtggttaccgacttccaggcaaagagaccatgtct
gacatcactttcgacagtctgcagacaatgctctctgcaaaggttcgtccagcaaagctg
tcacacgtcatgtcagaaaagatgggactagagctggactacttcctcaccgtatccaac
gatgacgttgcctggggtaacccctctgctgtagccagcgtgacgggagactcgtacctc
gagagctttgctctgaagaggcgactagaagggaaaccagccctcaacgtgcaagtggga
gctctccgcggaatcgacgcctatgaatttggaggacagacgactctaccagtaaaagat
ggagaagctagcctccatgttgaagagttcttggtggtgcttggcaaacttctgctatct
cctgataccccaccatgtgtctgcatcacacaccaggactgggaagctgtactgaagttc
tctcatgaccacaccctaaagtaccgccatcttgctggaggggaacaagtggccatttca
gactgtaaactgagtctagaggatctacagaaacaggttaagaacaagcttggagacctc
ttgtgcgtaaaccctgacaccatcgacctacgtcaacccatgatcaactacggtgtcgac
tccctgatggccgtcgagatggtgacatgggcaagtcgtgagctcagcgtggtcatctcc
cagctcgacatccttggcggtatcaccaccggcctcctcttggagaaggctatcgacaac
aacgtctgcatctga
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integrated database retrieval system
