Lytechinus variegatus (green sea urchin): 121428537
Help
Entry
121428537 CDS
T11173
Name
(RefSeq) valine--tRNA ligase-like isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121428537
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lvg01007
]
121428537
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lvg03016
]
121428537
Enzymes [BR:
lvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
121428537
Amino acid related enzymes [BR:
lvg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
121428537
Transfer RNA biogenesis [BR:
lvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121428537
Prokaryotic type
121428537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
121428537
NCBI-ProteinID:
XP_041481162
LinkDB
All DBs
Position
15:complement(17657619..17695100)
Genome browser
AA seq
1124 aa
AA seq
DB search
MYSSPLVNYQNATMLLQRGIRQWYIPLKNSSALWLVHIQRGRCFISYRQVHIPSSTRFLG
TQRLVTRRGLHISQIESTSDGRHPSAGVHESSRGAGDGQRAKAEKRRRRRERIDEIQIDG
EKAPGSRRQGLKSWSKKEIVTYDIPTPPGEKKDVSLDLPRSYSPRYVEACWYEWWERMGF
FKPESLARWRKVEKENEPFVMCLPPPNVTGVLHLGHTLTATIQDSLIRWKRMVGVPSLWI
PGCDHAGIATQVVVEKQLQHEKGLTRHDIGREEFLKEVWKWKEEKGGEIYLQLKQLGSSL
DWDRENFTMDQKFSYAVREAFIRLHDEGIIYRSSQLVNWSCTLISAISDIEVDQMSLPGR
SLVKVPGYTDPVEFGVLTYFAYPMEGSPDADIVVATTRPETMLGDTGIAVHPHDDRYSHL
IGRSAVHPFTGRRLKVIADEAVDMAYGTGAVKITPSHDYNDCEMGRKHDLDFVNVIDEEG
NIIAEGTEFQGMKRFIARQAVIQALKDRGLYRRTEDNPMSLPICSRSGDIVEPLLKSQWF
VNCAEMGQQALRSVKTGELEIIPPAYQNTWDHWLLNIRDWCISRQLWWGHRIPAYHVEIQ
GSDQASLKESDSWVSSHSKEEARDKASRKFGVDGCHITLTQDEDVLDTWFSSALFPFAVH
GWPHETPDLETYYPSTVLETGYDILFFWVARMVMMGQQLTGQLPFKKVYLHSMVRDAHGR
KMSKSLGNVIDPLDVIHGVSLEQLQSRLLHGNLKLDPKELKVALKGQRSDFPQGIPECGT
DALRFALASYNSQGQDINLNVDQVLEYRHFCNKIWNASRFALSAFGNDFSPQPLNEVLHS
ANQVDQWILHKLATTVQACHKGFNDVDLPVVTTALYRLWVHNLCDVYLECIKEPLRECSA
DERTATLNVLHSVLDGALRLIHPIMPFLTEELFQRLPRQQSYTYPSICVAPYPTLQEFPF
INEVVEGQVEVMLEVVHAVRSLEGMLGLKRGQSNVGVACQDEGVFSILSTLHQPLATLTR
SSHVEITSNEAPPPGSATLAIGSKCTAYLHLQEASSSAAVDRLQARKVKAENQLSKLMTA
MSIPLYEQKVPDHIQLNNRNKVEELEAELRSYKNLLASLQTIAR
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtacagctcaccattggtcaattatcaaaatgctaccatgctgcttcagagagggatt
agacaatggtatataccgctgaagaacagttcagccctgtggcttgttcacattcagagg
ggtagatgcttcatcagctacaggcaggttcacattccctccagtacacgttttcttgga
acacaacgcttggttaccaggaggggacttcacataagccagattgagagtacctcggat
ggtcgacatccctctgctggtgtgcacgaatcctcacgtggagctggggatgggcaaagg
gccaaggcggagaaacggaggaggcggagggagaggatcgatgagatccagattgatgga
gagaaggctcccgggagcaggagacagggcctgaagagctggagcaagaaggagatcgtc
acctatgatatacccactcctccaggagaaaagaaagatgtgtctctggaccttcctcga
tcctacagtcccaggtacgtggaagcgtgttggtatgagtggtgggaaaggatgggattc
ttcaaaccagaatctttggcaaggtggaggaaagttgagaaagagaatgaaccgtttgtg
atgtgcctccctccacccaacgttactggtgtccttcatcttggccacaccctaacggcc
accatacaagacagtctcatcagatggaaaagaatggtgggtgttccttccttatggata
ccaggttgtgaccatgcaggcatcgcaacacaggtggtagtagaaaaacaactacagcat
gagaaagggctcaccaggcatgacattggccgggaggagtttctcaaagaagtctggaag
tggaaggaagagaaaggaggggagatctacctacagctgaagcagctggggtcatcattg
gactgggatcgagagaacttcaccatggatcaaaaattctcttatgcagtacgggaagcc
tttatccgtcttcatgatgagggcatcatctatcggtcaagtcagcttgtcaactggtcc
tgtactctcatctctgctatctctgacattgaggttgatcaaatgtcgcttcctggtcgt
tcattggttaaggttccaggttatactgatcccgtggaatttggtgttctcacctacttt
gcttatcctatggaaggctcgccagatgctgatatagttgtagctaccactcgcccagag
acgatgcttggtgatactgggatagcagtccatccccatgacgacagatacagccatctg
attggtcggtcagctgtccatccttttactggacggaggttgaaggtcatcgctgatgag
gcagtggacatggcgtacggcacaggtgctgtgaaaatcactccatcccatgattacaat
gactgtgagatgggacgtaaacatgaccttgactttgtcaatgtcatcgacgaggaaggg
aatatcattgctgagggaactgagtttcagggaatgaagcgttttattgcccgccaagcc
gtcattcaggcgcttaaagaccgaggcttgtacaggagaacagaagacaacccaatgtct
cttccaatttgtagtcggtctggtgacatcgttgagccacttctcaaatctcagtggttt
gtgaattgtgctgagatgggccaacaagccctgagatctgttaagactggtgaacttgag
atcataccccctgcctaccagaatacatgggaccattggctcttaaatatcagagattgg
tgcatatctagacagctttggtggggtcatcgtattcctgcataccacgttgaaatacaa
ggtagcgatcaagcatccttgaaggagagtgattcatgggtaagcagtcacagtaaggaa
gaagctagagataaagcaagcagaaaatttggagtagatggttgtcatatcacactaaca
caagatgaggatgtccttgatacctggttctcgtctgctctcttcccattcgctgtacat
ggatggcctcatgagacccccgatcttgaaacatactaccccagcactgttttagagact
ggatatgatattctcttcttctgggtggctaggatggttatgatgggccaacaactgacc
ggacaacttcctttcaagaaggtataccttcattctatggtgagagatgcccacggacgt
aagatgagcaaatctcttggaaatgtgattgatccacttgatgtcatccatggagtctcc
cttgagcaattgcaatcaagacttctccatggcaacctgaagcttgaccctaaagaactg
aaggtcgccttgaaaggtcagaggtcggatttccctcaaggcatcccagagtgtggaaca
gacgccctaaggtttgcactcgcctcttacaactcacaaggtcaggatatcaacttgaat
gtggatcaagtgttggagtacagacatttctgtaacaagatatggaatgcttccaggttt
gctctgtcagctttcggaaacgatttcagcccacagcccctcaatgaggttttacattcc
gctaatcaagtggatcaatggatcctccacaaattggcgacaactgtccaggcctgccat
aaagggttcaatgacgtagaccttcccgtggtgacaaccgccctctataggctatgggtg
cacaacctttgtgatgtttacttggagtgcatcaaagaacctctcagagagtgctccgca
gatgaacgtactgcaacactgaatgtcctgcactcagtgctagatggcgctctccgcctt
atccatcccatcatgcctttcctgactgaagagttgtttcagaggttgccgaggcagcag
agttacacatatcccagtatctgtgtagctccgtaccccaccctacaagagttcccattc
ataaatgaggtggtcgaaggacaagttgaggtcatgctggaagtagttcatgcagtgagg
tcactggaaggaatgctgggattgaagagggggcagtctaatgttggtgttgcgtgtcag
gatgagggagtgttctcaattctcagcacactacatcaaccacttgccacactcactaga
tcatctcatgtagaaatcacctccaacgaggcccctccccctggaagtgccacactggct
attggaagcaaatgtactgcttatctccatcttcaggaagcctcaagctctgctgcagta
gatcgtttacaagccaggaaggtgaaggctgagaaccagctgagtaagctgatgacggcc
atgtctatcccactctatgaacagaaagtcccagatcatatacagcttaacaatagaaat
aaggttgaggagcttgaggctgaactgaggtcatacaagaatcttttagcatccctccag
accattgccagatga
DBGET
integrated database retrieval system
