Lytechinus variegatus (green sea urchin): 121428887
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Entry
121428887 CDS
T11173
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase Trub2-like
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lvg03029
]
121428887
Mitochondrial biogenesis [BR:
lvg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121428887
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
121428887
NCBI-ProteinID:
XP_041481696
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Position
15:20181538..20191071
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AA seq
329 aa
AA seq
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MMADFKVARKAWRSLSGLFAVYKPEGLSPQKVKHIVKSTLLQELNALQQRPQNTLVKIVP
ETDSRLTAANPGALRAVEVPSFTDHPLVRGPAYKDIAVSVVSLGLDTKACGVMVLAVRDG
RKLVNQYQAARLPRQYTVRGRFGVATDTHDSEGKIWQKTTYNHITMEKLDRITSRIHRSY
QRELIRQSGVDIHSQEAYELAVRGLLHPVGRTNPLLTDVACTVFEPPVFELEVTTYADTA
QYLRKVVHDIGQELKSSAIATQVRRTHDGPFNIDNALLKKHWKLNHIAEAIKECRRLVRP
SELVPVSQGREAVRVMQEVDQKWNQVYQD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgatttcaaggtagctcgcaaagcgtggcgttctttgagtggcttgttcgca
gtctacaaaccagaaggactatcacctcagaaagtcaaacatattgtgaagtctaccctt
ctacaagagctgaatgcgctgcagcagcgaccgcagaacacgctggtgaagattgtcccg
gagaccgattcccggttgactgccgccaaccctggtgccttgagggctgtggaggtaccc
agcttcacagatcatcctttggtgaggggaccggcctacaaggacatcgctgtttctgtg
gtgtccttgggactggacaccaaggcatgtggtgttatggtcttggccgtacgggatgga
aggaagctcgtcaatcagtaccaagcagcaagattaccgcggcagtacaccgtaagaggg
cgctttggcgtggcaacagacacacacgacagtgaaggcaagatttggcagaagacaaca
tataaccacatcaccatggagaagctggatcgcatcacttccagaatccaccgcagctac
cagcgggaactgatccgccagtccggcgtggacatccacagccaggaggcgtacgagctg
gcagtgagggggctgctacaccccgtaggaaggacaaaccctcttctgacggacgtcgca
tgtaccgtgtttgagcctccagtgtttgagctagaggttaccacctatgcggacacagct
cagtacctccgcaaagtcgtccatgatattggccaagaactcaagtcctcggccattgcc
acccaagtaagaaggacacacgacggaccgtttaacatcgacaatgccctgctcaagaaa
cattggaagctaaatcacatagctgaagccatcaaggaatgtcggcgtttagttcggcct
tcagagctggtcccagttagtcagggtcgagaggctgttcgggtgatgcaggaggtagac
caaaagtggaatcaggtttatcaggattga
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