Lytechinus variegatus (green sea urchin): 121428939
Help
Entry
121428939 CDS
T11173
Name
(RefSeq) ATP-binding cassette sub-family A member 2-like isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg02010
ABC transporters
lvg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121428939
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121428939
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvg02000
]
121428939
Transporters [BR:
lvg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
121428939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
121428939
NCBI-ProteinID:
XP_041481765
LinkDB
All DBs
Position
15:28913325..29013274
Genome browser
AA seq
2572 aa
AA seq
DB search
MGFMHQLLILLWKNWTLKRRSPFVLLLEILIPLTLFFILVSLRHHKPSIPESQKYYMAQP
LPSSGVIPVMQVFCPTAVRDPFGLPDHPNSEVTKFLEQLDQLVNTNTIFTRKFSVSDISV
LPDVFQDILGNQDSVEYKFASADDFPLSSILKDDQGFKDFLVQNLSLSQRDADHIVDSNI
STSQLFKVLYGSDPRNASNPYYPDNATDFNDFLDRRFGHVKNGALFRNADPGDLYSMDGL
VDILSQAPGLSDSPGGVDQSRGNMSASMQLAQYFEDRLLDPDELQDLTCNDHLGSSLYDT
ASNGQGENATDSFRERVCNHEESYPLFVSLSQELHDQIDLDQLVDKLNLTDTDLVNSRIE
AILASKEVQKFARFQQTLQDVYVFAQKLPGDACPAPTTPPPPSESPSTTEVPSYSPTLTP
ILTPQSPSMTPPSPSQDKPQEGDLGTEAPYTTFADDLISNFTTNLSTNFNGSWFNVTTSS
VSGTTPTPLWTTPTPKATKKPSPPPRPKTKQEEQKEKVALLYKLWAKIQYSVCGVELKVN
QHLLDRGDVRGLKLTHDQRKSLSLLLHVLFSRPTILYSPDTPDVRDVIDKASDFIYLAKN
ISHSAERWMNISKTIREYLDMNTTQLALQYLGKMEEQLSEHPEFLSNSSLSPDLQVFITN
SSLVSVPYIRNHLDVIDNAACAWLELTRPIKWDLFVGFPDEASMVQYALQDSHADGRTVF
ASVAFQTNKDGTLPSHTVYKIRQNSSFTDRTDLVRRRFWRPGANHHPVLGYYTYGFVWVQ
DIIDRAIIDKKVGRTVIEPGSYAQEFPYPCYVSDMFPFTIEQVMPMVMVISWVYSVAMLT
QSIVYEKELRLKEVMKMMGLSNAVHWVAWFITSFLQLSVTTGALTAMLIAGKVLANSDPV
IVWLFLTVYSVSVISFSFLVSSLFSKAKVAAACAGIIYFTSFVPCIYIQIREETWAYTTI
SAIIKSVASLSCTTAFGLGARYFALYEIGGVGVQWHTLNLSPVEHDDFNLLRIFVMLIID
IVLYLLLTWYIEGVHPGAYGLPRPWYFPVQPSYWFGTHRFKGSIMSKTFWKPKRYNHLSV
IEDDQAMAMSNSGDEPGFEPEPIDLELGVSIENLTKIYSTGKKLAVNNLCLNLYEGQITS
FLGHNGAGKTTTMSVLTGLFPPTSGTAKIYGSDIRTDMTSIRKSLGMCPQHNALFDKLTV
EDHVWFYAQLKGKPKWQIKQDTDKLISDIGLTHKRNTAVHRLSGGMKRRLSVAIAFVGDS
RTVILDEPTAGVDPCARRAIWDLLLKYKHGRTILLSTHHMDEADFLGDRIAIISHGQVKC
AGSSLFLKNSFGDGYHLTVVKKPAGQPSQGSSESDDTLGTSFRTLCSESTVTKFIQDLVP
GAYLTNQNLRELSYTLPFDSVACGHFPKLFTALDQKKDKLYISSYGLMDTTLEEVFLKVA
ENTGANRQDVLSSSRTSSSSGFGSFADSQDNQSSSGSSVFRSQSTSSSASSSDRYSSSQA
GMEHDEMEVGDGGAGGGRGGGTFTKLWRRRGRDGGSRSSAAGDVPLISVSEQPSNHGNTA
QQEDASQVGNDITFTRQTGLLCQLVIFIALIKKRLHHVKRNRKGLFSQLLLPAFFVTIAM
TVALSAPHIGDLPPLILSPSQYHPFEYPEGNFIPYTDEALNDKRSYRIYHSQCGDAGPQQ
LTETFKFPAGIGASCILKTPFNGTLDLLVESANYSHSVGLTGQYYDHMCEESFKKGKPLS
NYVPTPPSTNPHEEEEIDDEEKAHGGTHIKEVKCSCSEDRKNFQCPKNVGTPDPPLLQVI
TSDNLMDVSGRNLSEYLLYTTNRFRLHRYGALSFGNVRNFVPPKFNDDVPTIYKKIAVRN
AAMTWHNHKGFHSLPTYLSVMNNAILRANLDPQIHGNPSAYGISVINQPMNKTSSTMLDD
YTLQETSQVLIAMFIIVAMSFVPASFVVFVVAERASKAKHLQFVSGVNPLVYWLSNFFWD
MMNYLIPAACCVTILKAFDIPAYSSATNLPAVVILFLLYGFSITPMMYPASLIFKESSLA
YVCLIVINLFIGITTICGSFLVELFNLDDEGLKKVYDTMYSVFVIFPNYCLGRGLMDLAY
NDYMNEYYTKIGAVDEVQSPFRWDMLNRMFFVMVIEGVLAFAFTVLCEYGYIIRRIEILP
CCRRKKVDKSLLFSEDEDVLRERQRVLVGEASQDLLRIENLTKIYKTRRLGSHLAVDGLC
LGVPEGECFGLLGVNGAGKTTTFKMLCGDLGITGGDAYINKDSIFKKKMKAYKCIGYCPQ
FDALFDELTAREHLLLYARIKGVQQKDEKQVVTWALRKMALMQYADRPVGTYSGGNKRKL
STAIALLGNPQIIFMDEPTTGMDPHSRRFLWDCLLSIVQEGQRSVILTSHSMEECEVLCG
RLAIMVNGKFKCLGSAQHLKNRYGDGYTVTLKVGGERPNVKPVTRWFSHTFPHSDLKEEH
FNMVQYSIKLEHVDLAAIFSQIEDVRALLNIKEYSVSQTTLDDVFVTFAKQQVGHEDDNS
SGSKDNKKSSRRTKLEMKSMLLDESHLESDSDDEFLLKFSKNNPHLTFDIEV
NT seq
7719 nt
NT seq
+upstream
nt +downstream
nt
atggggtttatgcaccagctccttattcttctctggaagaattggactttgaaaaggaga
agtccttttgttcttctgttggagatcttgattccactcacattattcttcatcttagta
tctctcagacaccataaaccatccattccagaaagccagaaatactacatggcacaacct
ttaccctcatctggtgtcataccggtcatgcaagtcttctgccctacagctgtaagggac
ccctttggtcttccggaccacccaaattcagaggtgaccaaattcttggagcagcttgac
cagcttgtcaacacaaacacgatcttcactcgcaagttttccgtcagtgatatcagcgtt
cttccagatgtctttcaggatatcctcgggaaccaagactcggttgagtacaagtttgct
tctgccgatgacttcccattgtcatcgatactaaaagatgaccaaggtttcaaggatttc
ttggttcagaacctgagcttgagccagcgcgatgccgatcacatagtggatagcaatatc
agtaccagccagttgttcaaagttttgtatggcagcgatccccgcaatgccagcaatcct
tactacccagacaatgccacggacttcaacgacttcttagaccgtcgcttcggccatgtt
aagaatggcgccctcttccggaatgcggatcccggtgatctgtacagcatggacgggttg
gtggacatcctcagccaggcacctgggttgtccgattccccaggaggggttgaccagtcc
agaggaaacatgtctgcttccatgcagttagcgcagtactttgaggatcgtcttctagat
cccgatgagcttcaggacttgacctgcaacgaccacctcggaagttctctctatgacaca
gcctcaaatggccaaggagaaaatgctacggacagttttagagaacgagtgtgcaaccac
gaggagagctaccctttgtttgttagtctctcgcaagagctgcatgaccagattgatctg
gaccagttggttgacaagctgaatttgacagatactgatctagttaatagcagaattgag
gcaatccttgcttcaaaagaggttcaaaagtttgctcgctttcagcagactcttcaagat
gtgtacgtctttgcccaaaagcttcctggggatgcgtgccccgccccgacaacacctccc
ccacccagcgagtctccatccaccacagaggtcccctcctactcccccaccctgaccccc
atcctcaccccccaatccccttccatgacccctccctctcccagccaggataaaccccaa
gagggggatctcggcacggaggctccgtacactaccttcgcggacgatctaatctccaac
ttcaccacgaatctctccaccaactttaacggatcatggttcaacgtgacgacatcctcg
gtgtctgggaccacgcccactccattgtggaccacgcccaccccaaaggcaaccaagaag
cccagccctccgcccagaccgaagacgaagcaagaggaacagaaggaaaaagtggccctt
ctttacaagctttgggctaaaatacagtatagcgtgtgtggtgtggaactgaaggtcaat
caacacctccttgacaggggtgacgtgagggggttaaaactcacccacgaccagaggaag
agtcttagcctcctgcttcacgtcctctttagccgacccacaatcctctattcgccggac
acgcctgatgtcagagacgtcatcgataaggcaagtgacttcatctaccttgcgaagaac
atctcacatagtgcagaaagatggatgaatatatctaagacgatcagagagtaccttgat
atgaacacaacacagcttgcgttacagtatctaggaaagatggaagaacagctgagtgaa
cacccggagttcttgagcaactccagcctgagtcccgacctgcaggtcttcatcaccaac
agttccttggtgtctgttccctacatccggaaccatctggacgtcatcgacaatgctgcc
tgtgcgtggttggagctgaccagacccatcaagtgggatctgtttgttggcttccctgac
gaggcatccatggttcagtacgccctccaggactcccatgctgatggacggactgtcttt
gcaagtgttgccttccagaccaacaaagacggcacgcttccatcccacaccgtctacaag
atccgccagaactcttccttcactgaccgcactgaccttgtacgacgtcggttctggcgt
cctggtgccaaccaccaccctgttcttgggtactacacctatggcttcgtctgggtacag
gatatcattgacagagccataattgataagaaggttgggaggacagtcatcgagccagga
agctatgcccaggagttcccatacccttgctatgtctcagatatgttcccatttaccata
gagcaagtgatgccgatggtgatggtaatctcttgggtgtactcagtagccatgctcaca
caaagtatcgtctatgagaaagaattgcgactcaaggaggtcatgaagatgatggggctt
agcaacgccgtccattgggtagcttggttcatcaccagtttcctgcagctctctgtgacc
accggagctctgacggccatgctgatcgctggcaaggtacttgctaacagcgatccggtc
attgtctggctcttccttaccgtctactctgtcagcgtgatcagcttcagctttcttgtg
agttccctgttctctaaggccaaggtagcggccgcatgcgcaggaatcatctacttcacc
agctttgtgccgtgtatctacatccaaatcagagaagagacttgggcctataccaccatt
tcagcaatcatcaaatctgtagcatcgttgtcctgcactacagcttttggcctgggggca
cgttacttcgccctctacgagatcggtggtgtcggggtgcagtggcacaccctcaacctg
agcccagtggaacatgatgacttcaacctgctacggatcttcgtgatgctgataattgac
atagtgctctatctgcttctcacttggtacatagaaggcgtccatccaggtgcatatggt
ctgcctagaccgtggtactttccggtccagccgtcttattggttcggcactcatcggttc
aaagggagcatcatgtcaaagaccttctggaaacccaagagatacaaccacctatccgtc
atagaagatgatcaggcaatggccatgtcaaactcaggtgatgagccaggctttgagccg
gagcctattgatctggaactgggtgtctctattgaaaacctgaccaaaatttacagtaca
gggaagaagttggcagtgaacaacctttgtctaaatctctacgagggacagatcacttct
ttcttgggtcataatggagctggtaaaacaactacgatgtctgttttgactggattattc
ccacctacatctgggactgcaaagatttatggcagtgacatcagaacggacatgacctcc
attagaaagagcctggggatgtgtcctcagcacaacgccctctttgacaaattgacagtt
gaggaccatgtctggttttatgctcagctgaaaggaaaacctaaatggcagataaaacaa
gatactgataaacttatcagtgacattggcctcacccataagaggaatacagctgtccac
cgtttgtctggaggaatgaagcggcgtctgtctgtagctatcgcttttgttggagactcc
cgtactgtcatcctggacgagcccactgctggagttgatccttgtgcccgaagagcaatc
tgggacctgcttctcaaatataaacatggtcgtaccatcctcctctccacccatcatatg
gatgaggctgatttcctgggtgatcgtatcgcgatcatctcccacggtcaggtcaagtgt
gctgggtcatctctgttcctcaagaattcctttggagatggctatcacctcacagtggtc
aagaaacccgccggacagcccagtcaaggtagcagcgaatcagacgatacccttggcacc
tccttccgcaccctctgtagcgagagcactgtcaccaagttcatccaggatctggttccc
ggtgcttacctgaccaaccagaacctcagggagttgtcctacaccttgcccttcgacagc
gtggcctgcggacacttccccaagctcttcacggctctggaccagaagaaagacaagctg
tacatctccagctatggcctgatggatactaccttggaggaagtcttcctgaaggtagcc
gagaacactggtgccaatagacaagatgtactgtcctcatcaaggacgagctcatcttct
ggatttggaagctttgcagactctcaggacaaccagagtagctcaggatctagtgttttc
agaagccaatcgacatcgtcatcggcatcgtcatccgaccggtactcgtcatctcaagct
gggatggagcatgatgaaatggaggttggtgacggaggagcaggaggaggaaggggaggg
ggtactttcaccaaactatggagaaggagggggagagatggtggttcaaggagcagtgcc
gctggggacgttccactcatcagtgtcagtgaacagcccagtaatcatggaaacactgct
caacaagaagatgcttcccaggtgggtaatgacatcaccttcactcggcaaacgggcttg
ctctgtcaattagtcatctttatcgcgctcatcaagaagaggctacaccacgttaaaagg
aatcggaagggacttttctcccagttactcctgccagcattctttgttactatagcgatg
acggtggctctctcggctcctcatatcggtgatcttccgcctctcatcctgtcaccatct
cagtatcatccttttgagtacccagaaggtaacttcataccttacacggacgaagccctc
aacgacaaacgcagctaccgaatctaccactcccagtgcggcgacgccggaccccagcag
ctgaccgagaccttcaagttccccgcgggtatcggggccagctgcatcctcaagaccccc
ttcaacggaaccctggacctgctggtggagtcggccaactactcccacagcgtcgggttg
actggacagtattacgatcacatgtgtgaggagtcgttcaaaaaggggaaacccctctcc
aactatgtacccaccccgcccagcaccaaccctcatgaagaggaagagatagacgatgag
gagaaagcccatggtgggacccacatcaaagaagtgaagtgctcatgttccgaggatcgc
aagaacttccagtgccccaagaacgttgggacccctgaccctccgctcttgcaggtcatc
accagtgacaatcttatggacgtcagtggaaggaatctctctgaatatcttctctacacg
acgaacaggttcagacttcataggtatggagctctgtcttttggcaatgttagaaacttt
gttcctccaaagttcaatgacgatgtacccaccatctataagaagatcgctgtgcgcaac
gctgcaatgacatggcacaatcataaaggatttcacagcctgccaacatatctcagtgtg
atgaacaatgcgatcctgagagccaaccttgacccacagatacatggtaacccatcagcc
tatggtatctctgtcatcaaccaaccaatgaacaagacaagctccaccatgttggatgat
tacacacttcaagaaacatcccaagtccttatcgccatgttcatcatcgtagccatgtcc
tttgtaccagctagctttgtagtctttgtggtggcggagagggcatccaaagccaagcat
ctccagtttgtcagtggggtcaaccctctcgtctactggctctccaatttcttctgggac
atgatgaactacttgataccagcagcttgctgtgtgacgatcctcaaagcttttgatatt
ccagcttactcctcggccaccaaccttccagctgttgtgatccttttcttgctttatggt
ttttccatcacaccaatgatgtacccagcctcactcatcttcaaggagtctagtcttgcc
tacgtgtgcctcattgttatcaatcttttcatcggtatcacaacaatctgtggaagtttc
ctcgttgaactcttcaatcttgatgatgagggtttaaagaaggtgtacgatacaatgtac
tctgtctttgtcatctttcctaactattgtcttggacgtgggctcatggatcttgcttat
aatgactacatgaatgagtattacaccaaaataggtgccgttgatgaagttcagtcaccg
ttcagatgggatatgcttaacagaatgttttttgtgatggtcatagagggcgtcctggca
tttgcatttaccgtcctatgtgaatatggatacatcatcagaagaatagaaatattgcca
tgctgtagaagaaaaaaagttgataagagtcttctattcagcgaagacgaagatgtttta
agggagagacagcgagtattagtcggagaagcgtcccaagatttactgagaatagaaaac
cttacaaagatatataaaactagaagattagggagccatttagcggtggatggtctctgt
ttaggagtgccggaaggagagtgttttggtctccttggcgtaaacggtgcagggaagacg
actacatttaaaatgctttgtggtgatttaggaatcactgggggagatgcgtacataaat
aaagatagtatattcaagaagaagatgaaggcatataaatgtataggatactgtcctcag
tttgatgcactatttgatgagctcacagcgagagaacatctcctactctatgcaagaata
aagggggtccagcaaaaagatgaaaaacaggttgtaacatgggcattacgcaagatggcg
ttgatgcagtacgcagaccgacccgtcgggacgtacagtggagggaacaagaggaaactg
tcgactgccatcgcacttctaggcaatcctcagatcatattcatggacgagcctacaaca
gggatggacccgcattcccgacgtttcctctgggactgtctcctctccatcgtgcaggaa
ggtcaaaggtcagttatcctcacatcgcacagcatggaggagtgcgaagtcctctgcggc
cgtctagccatcatggttaatggtaaatttaagtgccttggatccgcccagcatctgaag
aatcgttatggcgacggatacactgtgacgctgaaggtgggaggggagaggcccaatgtt
aaaccggttacgaggtggtttagccataccttcccacattcagacctcaaggaggaacat
tttaatatggtgcaatatagtataaagctagagcatgtagatctagccgctatcttcagt
caaatagaagatgtaagagccttactcaacatcaaggagtactccgtcagtcaaacaaca
ctggatgatgtgtttgtgacgtttgccaagcaacaagtgggccatgaagacgacaactca
tctggaagcaaagataataagaaatcatctagaagaaccaaacttgaaatgaaatccatg
ttactagatgaaagtcaccttgaatcggattccgatgacgaattcctactcaaatttagc
aaaaataatcctcatctgacctttgatatagaagtatga
DBGET
integrated database retrieval system
