Lytechinus variegatus (green sea urchin): 121429437
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Entry
121429437 CDS
T11173
Name
(RefSeq) transcription factor Dp-1-like isoform X1
KO
K04683
transcription factor Dp-1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03083
Polycomb repressive complex
lvg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121429437
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121429437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121429437
03036 Chromosome and associated proteins [BR:
lvg03036
]
121429437
Transcription factors [BR:
lvg03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
121429437
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121429437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
121429437
NCBI-ProteinID:
XP_041482363
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Position
16:complement(15944148..15972958)
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AA seq
500 aa
AA seq
DB search
MEPSASLTSLWGPEGHGSPLKSQPSTPSKSLGKDILGEEVTSFYEDAGLGGIAREAKLID
PSGTLRSDGNLQQVTRVVQLPQLISPKPSPMKTTTQILPKVATIVTTTNVNALPVILTPQ
RQVLATGSPSQSQTFTPVALQSPSWTSGSSQKRRGDFSDEFDNSSKRKKRENQKESKGLR
HFSMKVCEKVQQKGITSYNEVAEELVREFSQPAHQFLPSESHQYDQKNIRRRVYDALNVL
MAMNIISKEKKEIKWIGLPTNSRQECDKLETEKRKRLESIRQKKSQLQELLLQQIAFKNL
VTRNKRLEDTGASPPTSNSAIHLPYIIVNTSKKTVIDCSISNDKYEYLFNFNDTFQIHDD
IEVLKRMGMAYGLEKGQCTLSDLERAKTMIPKTLEPYLAEMAQQSQSTSSTTIIAGPSGI
HTQSASKPHLPGDPQFSPLAVPLSHSVDAEVALATADLAISQSSSLSSYSDAGPSRGATD
TPSSLLDTDSDESSRESFQV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgagtgctagtttgactagcttgtggggtcctgagggtcatggtagcccattg
aagtcgcaaccctcgacaccttcaaagtctctaggtaaagatatccttggtgaagaggtg
acaagcttttatgaagatgctggccttggaggcattgcacgagaggcaaagttgattgac
ccttctggcacactgagaagtgatggcaatctccaacaagtcacaagagttgttcaactt
cctcagttaatctcacctaaaccctcccccatgaagaccaccacccagatactacccaaa
gtggcaaccatcgtcacgacaaccaatgttaacgcacttccagtgatcctcacccctcag
aggcaagtcttagcaactgggagtccaagtcaatcacaaactttcacacctgttgcttta
caatcaccaagttggacgtcagggtcatcacagaaaagaaggggtgatttttcagatgaa
tttgataatagtagcaagaggaagaagagggagaatcagaaagaatcaaagggtctccgt
cacttctccatgaaggtttgtgagaaagtacagcagaaaggcatcacatcgtataatgaa
gttgcagaggagctcgtcagagaatttagtcagccagcacaccaattcttaccatcagaa
tcgcatcagtatgatcagaaaaacatcaggcggcgggtctacgatgccctcaatgttctc
atggcgatgaacatcatctcaaaagaaaagaaagagattaaatggattggtttgccaacc
aactcaaggcaagaatgtgacaagttagaaacagagaagaggaaaagattagagagtata
aggcaaaagaaatcacagcttcaggaactcctcttacagcaaattgctttcaagaacctg
gtaacgaggaacaaaaggttagaagacacaggagcaagtccgcctaccagtaactcagcc
atccacttaccttatattattgtcaacacaagcaaaaagactgtcattgactgtagcata
tcaaatgataagtatgagtatcttttcaacttcaatgacacctttcaaatccatgatgac
attgaggtattaaagcgaatgggtatggcgtatggacttgagaaaggtcaatgtactctt
agtgatctagagagagccaagacaatgatacccaagacattagaaccttaccttgcagaa
atggcccaacagagccagagcacgtcgagtacaacaatcatcgcaggaccaagtggtatc
catacccagagtgcttcaaagcctcacctacctggtgatcctcagttctcaccccttgct
gttccgctctcacattctgttgatgcagaggttgccttagcaaccgctgacctggccatc
tcccaatcatcgagtttaagttcctactcggacgcaggcccatcacgaggtgctaccgac
acgcccagctcgttactcgacaccgacagtgacgaatcaagtcgcgaatcattccaagtc
taa
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